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Lag0025795 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025795
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:20746370..20749460
RNA-Seq ExpressionLag0025795
SyntenyLag0025795
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN62318.1 hypothetical protein VITISV_026527 [Vitis vinifera]5.7e-0436.78Show/hide
Query:  PHFHLSPSCCIMCVASSEHAGHLFVHCSFDASYWSEILDAFGWSAVFPNCIRNILSLIFVGHPFHGAKK--ILW----LALNRVFLW
        P+  LSP  CI+C+   E A HLF+HCS     W  +        V P CI +++S+ F G  F  +K+  +LW    +AL RV  W
Subjt:  PHFHLSPSCCIMCVASSEHAGHLFVHCSFDASYWSEILDAFGWSAVFPNCIRNILSLIFVGHPFHGAKK--ILW----LALNRVFLW
KAF7822363.1 auxin transport protein BIG [Senna tora]9.7e-0434.57Show/hide
Query:  PHFHLSPSCCIMCVASSEHAGHLFVHCSFDASYWSEILDAFGWSAVFPNCIRNILSLIFVGHPFHGAKKILWLALNRVFLW
        P+  LSP+ C+MC  +SE   HLF+HC      W+++   F  S V P  +   LS+ F G   +   + LW A     LW
Subjt:  PHFHLSPSCCIMCVASSEHAGHLFVHCSFDASYWSEILDAFGWSAVFPNCIRNILSLIFVGHPFHGAKKILWLALNRVFLW
TrEMBL top hitse value%identityAlignment
A5AD48 Reverse transcriptase domain-containing protein2.7e-0436.78Show/hide
Query:  PHFHLSPSCCIMCVASSEHAGHLFVHCSFDASYWSEILDAFGWSAVFPNCIRNILSLIFVGHPFHGAKK--ILW----LALNRVFLW
        P+  LSP  CI+C+   E A HLF+HCS     W  +        V P CI +++S+ F G  F  +K+  +LW    +AL RV  W
Subjt:  PHFHLSPSCCIMCVASSEHAGHLFVHCSFDASYWSEILDAFGWSAVFPNCIRNILSLIFVGHPFHGAKK--ILW----LALNRVFLW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCATTTCCATTTGTCTCCATCTTGTTGCATCATGTGTGTAGCTAGTTCAGAACATGCTGGGCATCTTTTTGTTCATTGTTCCTTCGATGCCAGCTATTGGTCAGA
GATTCTTGATGCTTTTGGATGGTCAGCTGTTTTTCCAAATTGCATTAGGAATATCCTTTCACTCATTTTTGTGGGACATCCGTTTCATGGAGCAAAGAAGATCTTGTGGC
TTGCTTTAAACAGAGTCTTTCTTTGGTTTTATGGGGCGAGCGGGAAAGGTTTGGCAAACGGGATCAGAAACGTAAGGTGGTTAGTGGGAAGACCACGTTTAATCAGCAGT
GTTTTCAAAGCGCAAGGCGCACCTCAAGGCGACAAGCCCCTTGATCGCCTTAAGGCGAGAGGCGACAAAAAGGCGACGCCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCATTTCCATTTGTCTCCATCTTGTTGCATCATGTGTGTAGCTAGTTCAGAACATGCTGGGCATCTTTTTGTTCATTGTTCCTTCGATGCCAGCTATTGGTCAGA
GATTCTTGATGCTTTTGGATGGTCAGCTGTTTTTCCAAATTGCATTAGGAATATCCTTTCACTCATTTTTGTGGGACATCCGTTTCATGGAGCAAAGAAGATCTTGTGGC
TTGCTTTAAACAGAGTCTTTCTTTGGTTTTATGGGGCGAGCGGGAAAGGTTTGGCAAACGGGATCAGAAACGTAAGGTGGTTAGTGGGAAGACCACGTTTAATCAGCAGT
GTTTTCAAAGCGCAAGGCGCACCTCAAGGCGACAAGCCCCTTGATCGCCTTAAGGCGAGAGGCGACAAAAAGGCGACGCCCGAGTGA
Protein sequenceShow/hide protein sequence
MPHFHLSPSCCIMCVASSEHAGHLFVHCSFDASYWSEILDAFGWSAVFPNCIRNILSLIFVGHPFHGAKKILWLALNRVFLWFYGASGKGLANGIRNVRWLVGRPRLISS
VFKAQGAPQGDKPLDRLKARGDKKATPE