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Lag0025796 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025796
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr10:20757322..20758187
RNA-Seq ExpressionLag0025796
SyntenyLag0025796
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]1.1e-1361.43Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELPII LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.5e-1360Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELP+I LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]1.1e-1361.43Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELPII LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
XP_008444294.1 PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo]1.9e-1358.57Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ++++ PS+R ELE VG  +W RA    K+Y +MTTNISES+N+ L+E RELP+I LLE +R
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]1.5e-1360Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELP+I LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
TrEMBL top hitse value%identityAlignment
A0A1S3B5C9 uncharacterized protein LOC1034862125.5e-1461.43Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELPII LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
A0A1S4E0D5 uncharacterized protein LOC1079912537.2e-1460Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELP+I LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
A0A5A7T2S1 Uncharacterized protein5.5e-1461.43Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELPII LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
A0A5A7VAU3 MuDRA-like transposase9.4e-1458.57Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ++++ PS+R ELE VG  +W RA    K+Y +MTTNISES+N+ L+E RELP+I LLE +R
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
A0A5D3E198 MuDRA-like transposase7.2e-1460Show/hide
Query:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
        L+FEYYMRQ+E++ PS+R ELE VG  +W RA    K+Y ++TTNISES+N+ L+E RELP+I LLE IR
Subjt:  LDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAAATTCCAACGTTTGCTGCAGGTTGTTCGAAAGGAATCCAGATATTTACCATTTGTACTGGATTTCGAATACTACATGAGGCAGATGGAAGAAATCATTCCTTC
TATTAGGGGTGAGCTTGAGGAGGTGGGGTATGCGCGGTGGACTCGTGCAATTTCCACGAGCAAACAGTACGTGTTGATGACTACTAATATTTCGGAGAGTCTAAATGCTT
ATCTGAGAGAGGCTCGTGAATTACCTATCATCCCATTGTTGGAGTTTATAAGAGATTTTTTTACAACGATGGTTCTACGAGCAGAGGAACCATGCAAGCATTCAGAGGTG
TACCATTACAACATATGCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCAAATTCCAACGTTTGCTGCAGGTTGTTCGAAAGGAATCCAGATATTTACCATTTGTACTGGATTTCGAATACTACATGAGGCAGATGGAAGAAATCATTCCTTC
TATTAGGGGTGAGCTTGAGGAGGTGGGGTATGCGCGGTGGACTCGTGCAATTTCCACGAGCAAACAGTACGTGTTGATGACTACTAATATTTCGGAGAGTCTAAATGCTT
ATCTGAGAGAGGCTCGTGAATTACCTATCATCCCATTGTTGGAGTTTATAAGAGATTTTTTTACAACGATGGTTCTACGAGCAGAGGAACCATGCAAGCATTCAGAGGTG
TACCATTACAACATATGCAACTGA
Protein sequenceShow/hide protein sequence
MRKFQRLLQVVRKESRYLPFVLDFEYYMRQMEEIIPSIRGELEEVGYARWTRAISTSKQYVLMTTNISESLNAYLREARELPIIPLLEFIRDFFTTMVLRAEEPCKHSEV
YHYNICN