; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025798 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025798
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:21059861..21061009
RNA-Seq ExpressionLag0025798
SyntenyLag0025798
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.1e-5351.89Show/hide
Query:  GPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPS
        GP   ESGRKRKA +RE     G+  +Y   + + S K+EF+E E   + HPHNDALV+TL IANAKVHRIL+DGGS  D+ S T + AM LG + L+ S
Subjt:  GPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPS

Query:  LTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR
        LT L+GFGGE++ P+G IEL +TF   P ++TR+++FLVVD   +YN IL RPT+H L+A+ STYHQ +KFP   GVG + GEQ++S+ECY+ +++  D 
Subjt:  LTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR

Query:  KVQATKASGDGR
             KAS  GR
Subjt:  KVQATKASGDGR

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]6.3e-5747.98Show/hide
Query:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKG-GNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHP
        L+ E++ LIQ GYLKE++   +      T+ G+    +P  EI+TI+GGP   E GRKRKA+IRE      +  +Y   + +   K+EF+E E   + HP
Subjt:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKG-GNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHP

Query:  HNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGR
        HND LV+TL IANAKVHRIL+DGGS AD++S T + AM LG    + S   LV F GE+V P G  EL+VTF  GP ++T I++FLV+D   +YN ILGR
Subjt:  HNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGR

Query:  PTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR
        PT+H LKA+ STYHQ + FP   G+G +  EQ++S+ECY+ ++K  DR
Subjt:  PTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]6.1e-5246.15Show/hide
Query:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH
        L++E+E LI+ GYLKE++   +      T+ G+   +P  EIQTI+GGP   ESGRK K  +RE     G   +Y   + + S  +EF++ E   + HPH
Subjt:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH

Query:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP
        NDALV+TL IAN KVHRIL+DGG+ AD++S T +  M +G   L+ + T LV          G IE  VTF  GP +VT+++ FLVVD   +YN ILGR 
Subjt:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP

Query:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR
        T+H LKA+ STYHQ +KFP   GVG + GEQ++S+ECY+ ++K  DR
Subjt:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]3.1e-5647.22Show/hide
Query:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH
        L++E+E LI+ GYLKE++  +  K  + +E      +P  EIQTI GGP+  E G+KRKA+++E    PG   +Y         K++F+E E   + HPH
Subjt:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH

Query:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP
        NDALV+TL I N KVHRIL+DGGS   ++S T + AM LG   L+ +L  LVGFGGE+V  +  I+L VTF  GP  +T+I+ FLVVD   +YN ILGRP
Subjt:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP

Query:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDRKVQAT
        T+H LKA+ STYH+ LKFP + G+  V GEQ++S ECY+ +L+  D   +A+
Subjt:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDRKVQAT

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]4.0e-5151.98Show/hide
Query:  LGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLR
        +GGP   ESGRKRKA +RE      +  +Y   + + S  +EF+E E   + HPHNDALV+TL IAN KVHRIL+DGGS AD++S T +  M LG   L+
Subjt:  LGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLR

Query:  PSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNV
         S   L+GFG E+V P G IEL VTF  GP +VT++++FLVVD   +YN ILGR T+H LKA+ STYHQ +KFP   GVG + GEQ++S+ECY+ +++  
Subjt:  PSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNV

Query:  DR
        DR
Subjt:  DR

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159015.4e-5451.89Show/hide
Query:  GPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPS
        GP   ESGRKRKA +RE     G+  +Y   + + S K+EF+E E   + HPHNDALV+TL IANAKVHRIL+DGGS  D+ S T + AM LG + L+ S
Subjt:  GPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPS

Query:  LTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR
        LT L+GFGGE++ P+G IEL +TF   P ++TR+++FLVVD   +YN IL RPT+H L+A+ STYHQ +KFP   GVG + GEQ++S+ECY+ +++  D 
Subjt:  LTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR

Query:  KVQATKASGDGR
             KAS  GR
Subjt:  KVQATKASGDGR

A0A6J1D8C9 uncharacterized protein LOC1110183003.1e-5747.98Show/hide
Query:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKG-GNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHP
        L+ E++ LIQ GYLKE++   +      T+ G+    +P  EI+TI+GGP   E GRKRKA+IRE      +  +Y   + +   K+EF+E E   + HP
Subjt:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKG-GNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHP

Query:  HNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGR
        HND LV+TL IANAKVHRIL+DGGS AD++S T + AM LG    + S   LV F GE+V P G  EL+VTF  GP ++T I++FLV+D   +YN ILGR
Subjt:  HNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGR

Query:  PTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR
        PT+H LKA+ STYHQ + FP   G+G +  EQ++S+ECY+ ++K  DR
Subjt:  PTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR

A0A6J1DQL9 uncharacterized protein LOC1110229053.0e-5246.15Show/hide
Query:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH
        L++E+E LI+ GYLKE++   +      T+ G+   +P  EIQTI+GGP   ESGRK K  +RE     G   +Y   + + S  +EF++ E   + HPH
Subjt:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH

Query:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP
        NDALV+TL IAN KVHRIL+DGG+ AD++S T +  M +G   L+ + T LV          G IE  VTF  GP +VT+++ FLVVD   +YN ILGR 
Subjt:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP

Query:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR
        T+H LKA+ STYHQ +KFP   GVG + GEQ++S+ECY+ ++K  DR
Subjt:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDR

A0A6J1DV51 uncharacterized protein LOC1110246621.5e-5647.22Show/hide
Query:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH
        L++E+E LI+ GYLKE++  +  K  + +E      +P  EIQTI GGP+  E G+KRKA+++E    PG   +Y         K++F+E E   + HPH
Subjt:  LRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEIQTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPH

Query:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP
        NDALV+TL I N KVHRIL+DGGS   ++S T + AM LG   L+ +L  LVGFGGE+V  +  I+L VTF  GP  +T+I+ FLVVD   +YN ILGRP
Subjt:  NDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRP

Query:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDRKVQAT
        T+H LKA+ STYH+ LKFP + G+  V GEQ++S ECY+ +L+  D   +A+
Subjt:  TLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDRKVQAT

A0A6J1DXV4 uncharacterized protein LOC1110251471.9e-5151.98Show/hide
Query:  LGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLR
        +GGP   ESGRKRKA +RE      +  +Y   + + S  +EF+E E   + HPHNDALV+TL IAN KVHRIL+DGGS AD++S T +  M LG   L+
Subjt:  LGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLR

Query:  PSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNV
         S   L+GFG E+V P G IEL VTF  GP +VT++++FLVVD   +YN ILGR T+H LKA+ STYHQ +KFP   GVG + GEQ++S+ECY+ +++  
Subjt:  PSLTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNV

Query:  DR
        DR
Subjt:  DR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATATCAGACCGGCGTCGAGAAGATAGGGGAAAGAGGCACCAGGCCGAGGGAAGAGGTCGGAGCCGACCTGAGCACTCCTCGGCCAATGGCCGAGGTCGA
CCAGAAGCCAAGGAGCCGCAAGTTCGTGCGGAGCCAAAGGCCAGATTCGACAGGTATACACCACTAACAACTTCGCTTGAACAGTTACGAGATGAGATAGAAACC
CTAATCCAAGAGGGTTACTTGAAGGAGTTCATAGGACATGACAGAGGGAAGAGGCTGGTGCAGACAGAGCCAGGCAAGGGAGGCAATAACCCACCGCTCGAGATA
CAGACAATTTTAGGAGGACCATCCGGAGGAGAGTCAGGCAGAAAGCGGAAGGCTGCAATCCGAGAGATATGGCAAGAGCCTGGAGAGCAAGGTATGTACTCGCTC
CTACTCGATGAAAACTCACCAAAATTAGAGTTTACAGAGAAGGAGGTCGTGGGGATACGCCATCCACACAACGACGCACTGGTGGTCACCCTAACGATTGCCAAT
GCAAAAGTTCATCGAATCCTCATTGATGGAGGGAGTTTCGCTGATGTTCTCTCAACCACACCATTCGACGCCATGAGGCTGGGAAGCGATAGGTTGCGGCCAAGC
CTCACGCTGCTGGTGGGGTTTGGCGGAGAAAAAGTAAGCCCAAGAGGAAGCATTGAGCTGTCAGTGACGTTTGAGGAAGGACCGTGGACAGTAACGAGGATAATC
AACTTCTTGGTGGTAGACTGCGTCCCGACATATAACGTCATCTTGGGACGACCCACCCTACATGGACTCAAAGCTGTAGCTTCGACCTACCACCAAGTCCTGAAG
TTCCCAATTGAAGAAGGTGTAGGAGCGGTGTATGGTGAGCAGAAAATGTCGAAGGAATGCTACTTTATGGCACTCAAGAACGTTGACAGAAAGGTTCAAGCGACG
AAAGCCTCAGGAGATGGCCGAGCCCGAGCAGTTGAAGGGACAAGTTTTCCCCTCCCAATGGAGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATATCAGACCGGCGTCGAGAAGATAGGGGAAAGAGGCACCAGGCCGAGGGAAGAGGTCGGAGCCGACCTGAGCACTCCTCGGCCAATGGCCGAGGTCGA
CCAGAAGCCAAGGAGCCGCAAGTTCGTGCGGAGCCAAAGGCCAGATTCGACAGGTATACACCACTAACAACTTCGCTTGAACAGTTACGAGATGAGATAGAAACC
CTAATCCAAGAGGGTTACTTGAAGGAGTTCATAGGACATGACAGAGGGAAGAGGCTGGTGCAGACAGAGCCAGGCAAGGGAGGCAATAACCCACCGCTCGAGATA
CAGACAATTTTAGGAGGACCATCCGGAGGAGAGTCAGGCAGAAAGCGGAAGGCTGCAATCCGAGAGATATGGCAAGAGCCTGGAGAGCAAGGTATGTACTCGCTC
CTACTCGATGAAAACTCACCAAAATTAGAGTTTACAGAGAAGGAGGTCGTGGGGATACGCCATCCACACAACGACGCACTGGTGGTCACCCTAACGATTGCCAAT
GCAAAAGTTCATCGAATCCTCATTGATGGAGGGAGTTTCGCTGATGTTCTCTCAACCACACCATTCGACGCCATGAGGCTGGGAAGCGATAGGTTGCGGCCAAGC
CTCACGCTGCTGGTGGGGTTTGGCGGAGAAAAAGTAAGCCCAAGAGGAAGCATTGAGCTGTCAGTGACGTTTGAGGAAGGACCGTGGACAGTAACGAGGATAATC
AACTTCTTGGTGGTAGACTGCGTCCCGACATATAACGTCATCTTGGGACGACCCACCCTACATGGACTCAAAGCTGTAGCTTCGACCTACCACCAAGTCCTGAAG
TTCCCAATTGAAGAAGGTGTAGGAGCGGTGTATGGTGAGCAGAAAATGTCGAAGGAATGCTACTTTATGGCACTCAAGAACGTTGACAGAAAGGTTCAAGCGACG
AAAGCCTCAGGAGATGGCCGAGCCCGAGCAGTTGAAGGGACAAGTTTTCCCCTCCCAATGGAGCATTAA
Protein sequenceShow/hide protein sequence
MSISDRRREDRGKRHQAEGRGRSRPEHSSANGRGRPEAKEPQVRAEPKARFDRYTPLTTSLEQLRDEIETLIQEGYLKEFIGHDRGKRLVQTEPGKGGNNPPLEI
QTILGGPSGGESGRKRKAAIREIWQEPGEQGMYSLLLDENSPKLEFTEKEVVGIRHPHNDALVVTLTIANAKVHRILIDGGSFADVLSTTPFDAMRLGSDRLRPS
LTLLVGFGGEKVSPRGSIELSVTFEEGPWTVTRIINFLVVDCVPTYNVILGRPTLHGLKAVASTYHQVLKFPIEEGVGAVYGEQKMSKECYFMALKNVDRKVQAT
KASGDGRARAVEGTSFPLPMEH