; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025805 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025805
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:21290208..21293239
RNA-Seq ExpressionLag0025805
SyntenyLag0025805
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032941.1 hypothetical protein E6C27_scaffold269G00150 [Cucumis melo var. makuwa]2.4e-0952.56Show/hide
Query:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKV
        MA  KEENQC TST+TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R M  L+ +     +    +H+  SS++
Subjt:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKV

KAA0033937.1 hypothetical protein E6C27_scaffold43059G001310 [Cucumis melo var. makuwa]7.0e-0962.71Show/hide
Query:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQ
        MA  KEENQC TST+ R  AF+RLS+STSKK +PSTS FDRLK+ +DQ +R M  L+P+
Subjt:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQ

KAA0041771.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.0e-0947.62Show/hide
Query:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKVLTRF
        + MA  KEENQC TST+ R SAF+RLS+STSKK +P TS FDRLK+ +DQ +R M  L+ +     +    +H+  SS++  +F
Subjt:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKVLTRF

KAA0052018.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.0e-0962.71Show/hide
Query:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE
        + MA  KEENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R M  L+
Subjt:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE

KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.0e-0962.71Show/hide
Query:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE
        + MA  +EENQC TST+TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R M +L+
Subjt:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE

TrEMBL top hitse value%identityAlignment
A0A5A7STU1 Uncharacterized protein1.2e-0952.56Show/hide
Query:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKV
        MA  KEENQC TST+TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R M  L+ +     +    +H+  SS++
Subjt:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKV

A0A5A7SXD7 Uncharacterized protein3.4e-0962.71Show/hide
Query:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQ
        MA  KEENQC TST+ R  AF+RLS+STSKK +PSTS FDRLK+ +DQ +R M  L+P+
Subjt:  MAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQ

A0A5A7TJH2 Retrotransposon gag protein3.4e-0947.62Show/hide
Query:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKVLTRF
        + MA  KEENQC TST+ R SAF+RLS+STSKK +P TS FDRLK+ +DQ +R M  L+ +     +    +H+  SS++  +F
Subjt:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKVLTRF

A0A5A7U9V3 Retrotransposon gag protein3.4e-0962.71Show/hide
Query:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE
        + MA  KEENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R M  L+
Subjt:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE

A0A5A7VFA5 Ty3-gypsy retrotransposon protein3.4e-0962.71Show/hide
Query:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE
        + MA  +EENQC TST+TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R M +L+
Subjt:  MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGGCCGCGACAAAAGAAGAAAATCAATGTTCGACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
GACATCTGTTTTTGATCGCCTCAAAGTAATAAGCGATCAACCTAAAAGAAGGATGGATAACTTGGAGCCTCAAGTTCGTTGTTTCACTCACCCTAAGTTCGTTGTTCACG
CTTCTTCAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTTCAATTTCGAAGGTTCTCACGCGTTTCGTTGTGGTTCCTTCTATTCAATTTCGAAGGTTCT
CATGCGTTTCGTTGCAGTTCCTTCTCTCAGAGTTTGAAGGTTCTCACGTTGTTTCGCTACAGTTCCTTCTCTCCAAGTTCGAAGTTTATTCTCTCAAGCTTGAAGGTTCT
CACGCTGCTTCACTGCAGTTCCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCAAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTT
GTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATGTTGTTGTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGC
GAAGGATCTTATGTTGTGTGTTTCTACATTGTTCCCTCTTCTCTCAAGTTCGAAGGTTCTCACGCAGCTTCGTTGGAGTTCCTTCTCCCCAAGTTCGATGGTTCTCACGC
GCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGGTTGCAGTTCTTTCTCCCCATGTTCAAAGGTTCACGCACTTCGCTGAAGTTCCTTCTCTCCA
AGTTTGAAGGTTCTCACGTTGCTTCGATGCAATTCCTTCTCTCCAAGTTCAAAGATTCTCATGCGCTTCGTTGCAGTTCCTTCTCTTCAAGTTCGAAGGTTCACACGTTG
TGTTGCTTCTTCACCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCATGCGCTTCGTTGTAGTTTCTTCTCCCCAAGTTCA
AAAGTTCACCCTCTGTATGCTGTTATTTCTTCCAACGCTGCTTCTGCTTCCTGAAGGTTCTAACGCTGCTTCTGTTTCCACACGTTGCTTCGATGCAGTTCCTTGTTCCT
TCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGTTGTTGTTCCTTCTCTAAATTCAAAGTCACGCTACGTTGTTCGAAGGTCCTTCCTCTTATACTGCATTGCATCATT
GTTCCTTCAACAAGTTCGAAGGTTCTTACATTGCAGCAGAAAAGGAGCCCAAGTGGGAAGGACATCATGTGTCCTTGGGCCGAGGGACGTCGTAGCAACAAAAGTCCAAG
GAGCACGTCATGTCCTTGTACTCATGCTGAAAGATGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGGCGGCGGCAAAAGTC
CAAGGAGCACGTCATGTCCTTGTACTATTGCCGAAAGACGTGGCGGCGACAAAAGTTCAAGGAATACGTCATGTCCTTGTACTCATGCTGAAAGACGTGGCGGCGGCAAA
AGTCCAAGGAACACGTCATGTTCTTGTACTCATGCTGAAAGACGTGGCGACGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGACGGTGG
CAAAAGTCCAAGGAACATGTCCTTGGCTGGAACGCTTGATCTCGAGTCTGAAGCTTCAATGGATTCTTGGAGATTGAAGTCTTCTAGTCTTGAAGGAGTCTTCAATCTTC
AAGAAGTGTCGATGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGGCCGCGACAAAAGAAGAAAATCAATGTTCGACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
GACATCTGTTTTTGATCGCCTCAAAGTAATAAGCGATCAACCTAAAAGAAGGATGGATAACTTGGAGCCTCAAGTTCGTTGTTTCACTCACCCTAAGTTCGTTGTTCACG
CTTCTTCAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTTCAATTTCGAAGGTTCTCACGCGTTTCGTTGTGGTTCCTTCTATTCAATTTCGAAGGTTCT
CATGCGTTTCGTTGCAGTTCCTTCTCTCAGAGTTTGAAGGTTCTCACGTTGTTTCGCTACAGTTCCTTCTCTCCAAGTTCGAAGTTTATTCTCTCAAGCTTGAAGGTTCT
CACGCTGCTTCACTGCAGTTCCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCAAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTT
GTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATGTTGTTGTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGC
GAAGGATCTTATGTTGTGTGTTTCTACATTGTTCCCTCTTCTCTCAAGTTCGAAGGTTCTCACGCAGCTTCGTTGGAGTTCCTTCTCCCCAAGTTCGATGGTTCTCACGC
GCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGGTTGCAGTTCTTTCTCCCCATGTTCAAAGGTTCACGCACTTCGCTGAAGTTCCTTCTCTCCA
AGTTTGAAGGTTCTCACGTTGCTTCGATGCAATTCCTTCTCTCCAAGTTCAAAGATTCTCATGCGCTTCGTTGCAGTTCCTTCTCTTCAAGTTCGAAGGTTCACACGTTG
TGTTGCTTCTTCACCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCATGCGCTTCGTTGTAGTTTCTTCTCCCCAAGTTCA
AAAGTTCACCCTCTGTATGCTGTTATTTCTTCCAACGCTGCTTCTGCTTCCTGAAGGTTCTAACGCTGCTTCTGTTTCCACACGTTGCTTCGATGCAGTTCCTTGTTCCT
TCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGTTGTTGTTCCTTCTCTAAATTCAAAGTCACGCTACGTTGTTCGAAGGTCCTTCCTCTTATACTGCATTGCATCATT
GTTCCTTCAACAAGTTCGAAGGTTCTTACATTGCAGCAGAAAAGGAGCCCAAGTGGGAAGGACATCATGTGTCCTTGGGCCGAGGGACGTCGTAGCAACAAAAGTCCAAG
GAGCACGTCATGTCCTTGTACTCATGCTGAAAGATGTGGCGGCGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGGCGGCGGCAAAAGTC
CAAGGAGCACGTCATGTCCTTGTACTATTGCCGAAAGACGTGGCGGCGACAAAAGTTCAAGGAATACGTCATGTCCTTGTACTCATGCTGAAAGACGTGGCGGCGGCAAA
AGTCCAAGGAACACGTCATGTTCTTGTACTCATGCTGAAAGACGTGGCGACGGCAAAAGTCCAAGGAGCACGTCATGTCCTTGTACTAATGCTGAAAGATGTGACGGTGG
CAAAAGTCCAAGGAACATGTCCTTGGCTGGAACGCTTGATCTCGAGTCTGAAGCTTCAATGGATTCTTGGAGATTGAAGTCTTCTAGTCTTGAAGGAGTCTTCAATCTTC
AAGAAGTGTCGATGTCTTGA
Protein sequenceShow/hide protein sequence
MGMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVISDQPKRRMDNLEPQVRCFTHPKFVVHASSSSKVLTRFVAVPSLQFRRFSRVSLWFLLFNFEGS
HAFRCSSFSQSLKVLTLFRYSSFSPSSKFILSSLKVLTLLHCSSFSLSSKVLTRFAAVPSLKVRGSLHCTLLRCSFSKFEGSSLYVVVLFLLQVRRFSVVRLLRCSSSKC
EGSYVVCFYIVPSSLKFEGSHAASLEFLLPKFDGSHALRCSSFSPRSKVLTRWLQFFLPMFKGSRTSLKFLLSKFEGSHVASMQFLLSKFKDSHALRCSSFSSSSKVHTL
CCFFTKFEGSHALRCSSFSPSLKVLMRFVVVSSPQVQKFTLCMLLFLPTLLLLPEGSNAASVSTRCFDAVPCSFSPSSKVLTLLRCCSFSKFKVTLRCSKVLPLILHCII
VPSTSSKVLTLQQKRSPSGKDIMCPWAEGRRSNKSPRSTSCPCTHAERCGGGKSPRSTSCPCTNAERCGGGKSPRSTSCPCTIAERRGGDKSSRNTSCPCTHAERRGGGK
SPRNTSCSCTHAERRGDGKSPRSTSCPCTNAERCDGGKSPRNMSLAGTLDLESEASMDSWRLKSSSLEGVFNLQEVSMS