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Lag0025807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein of unknown function, DUF584
Genome locationchr10:21303880..21304385
RNA-Seq ExpressionLag0025807
SyntenyLag0025807
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652847.1 hypothetical protein Csa_022744 [Cucumis sativus]9.1e-4293.07Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLDRL LPISTSLKYQSAPVNVPIMSK  VQR  E+DVDDVDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

KAG6573630.1 hypothetical protein SDJN03_27517, partial [Cucurbita argyrosperma subsp. sororia]4.3e-5281.56Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSK-PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPL+RL LPIS+SLKYQSAPVNVP+MSK  VQRH EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQ        
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSK-PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  TAATIWFTLTTISVALLRILRVQEYLNLLDTHRKKELELEL
         +A++WFTLTT+ VAL  +LRVQEYLNLLDTHRKKELELEL
Subjt:  TAATIWFTLTTISVALLRILRVQEYLNLLDTHRKKELELEL

KAG7012711.1 hypothetical protein SDJN02_25464, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-5281.56Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSK-PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPL+RL LPIS+SLKYQSAPVNVP+MSK  VQRH EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQ        
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSK-PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  TAATIWFTLTTISVALLRILRVQEYLNLLDTHRKKELELEL
         +A++WFTLTT+ VAL  +LRVQEYLNLLDTHRKKELELEL
Subjt:  TAATIWFTLTTISVALLRILRVQEYLNLLDTHRKKELELEL

KGN64943.1 hypothetical protein Csa_022813 [Cucumis sativus]9.1e-4293.07Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLDRL LPISTSLKYQSAPVNVPIMSK  VQR  E+DVDDVDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

XP_022142671.1 homeobox protein vnd-like [Momordica charantia]5.7e-4492Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKPVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        MIPTIPKPPL+RL LPIS SLKYQSAPVNVPIMSKPVQRH E+DVDD+DEGDGEMLPPHE VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKPVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT

TrEMBL top hitse value%identityAlignment
A0A0A0LT40 Uncharacterized protein4.4e-4293.07Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLDRL LPISTSLKYQSAPVNVPIMSK  VQR  E+DVDDVDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

A0A1S4E4F1 uncharacterized protein LOC1034998844.9e-4192.08Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLDRL LPISTSLKYQSAPVNVPIMSK  VQR  E+DVD VDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

A0A5A7SY45 Senescence regulator4.9e-4192.08Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLDRL LPISTSLKYQSAPVNVPIMSK  VQR  E+DVD VDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKP-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

A0A6J1CMW3 homeobox protein vnd-like2.8e-4492Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKPVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        MIPTIPKPPL+RL LPIS SLKYQSAPVNVPIMSKPVQRH E+DVDD+DEGDGEMLPPHE VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKPVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT

A0A6J1G2B0 uncharacterized protein LOC1114500335.7e-4291.09Show/hide
Query:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSK-PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPL+RL LPIS+SLKYQSAPVNVP+MSK  VQRH EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSK-PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11700.1 Protein of unknown function, DUF5848.0e-1248.81Show/hide
Query:  SAPVNVPIMSK-----PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLS---CSVLEGAGRTLKGRDLRQVRNAVWRRT
        SAPVNVP  SK      V+  HE D ++ +E  G M+PPHE +A+S  +    S    SV EG GRTLKGR+LR+VR+A+W +T
Subjt:  SAPVNVPIMSK-----PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLS---CSVLEGAGRTLKGRDLRQVRNAVWRRT

AT1G61930.1 Protein of unknown function, DUF5849.4e-1345.88Show/hide
Query:  SAPVNVPIMSK-----PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPML----SCSVLEGAGRTLKGRDLRQVRNAVWRRT
        SAPVNVP  SK      V+  HE+D +D ++ +  M+PPHE +A+S A+          SV +G GRTLKGR+LR+VR+A+W +T
Subjt:  SAPVNVPIMSK-----PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPML----SCSVLEGAGRTLKGRDLRQVRNAVWRRT

AT3G15040.1 Protein of unknown function, DUF5841.0e-2763.96Show/hide
Query:  IPTIPKPPLDRLSLPISTSL----KY-QSAPVNVPIMSKPVQRHH-------EIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDL
        IPT PKPP +R  LP S S     KY QSAPV VP++S  +   H       ++  DD +E +GEMLPPHEIVARSLAQS +LSCSVLEGAGRTLKGRDL
Subjt:  IPTIPKPPLDRLSLPISTSL----KY-QSAPVNVPIMSKPVQRHH-------EIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDL

Query:  RQVRNAVWRRT
        RQVRNAV+RRT
Subjt:  RQVRNAVWRRT

AT4G04630.1 Protein of unknown function, DUF5842.5e-1346.74Show/hide
Query:  TSLKYQSAPVNVPIMSK----------PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        + +K  SAP+NVP  SK              H     DD ++ DG M+PPHE VAR LA++ + S S+ EG GRTLKGRDL +VRNAV  +T
Subjt:  TSLKYQSAPVNVPIMSK----------PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT

AT4G21970.1 Protein of unknown function, DUF5843.2e-1346.74Show/hide
Query:  ISTSLKYQSAPVNVPIMSK--------PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        +S   K  SAP+N+P  SK             H   +DD DE  G M+PPHE+VA+ LA++ + S S+ EG GRTLKGRDL + RNAV  RT
Subjt:  ISTSLKYQSAPVNVPIMSK--------PVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCACCATCCCTAAACCTCCTCTCGACCGATTGTCCTTGCCTATTTCTACCTCCTTGAAGTACCAGTCCGCTCCGGTAAATGTGCCCATAATGTCCAAGCCGGT
TCAGAGACACCACGAGATCGATGTGGATGATGTTGATGAAGGAGATGGGGAGATGTTGCCGCCGCATGAGATTGTCGCCAGAAGTTTGGCTCAGTCGCCGATGTTGTCTT
GCTCGGTGCTCGAGGGCGCTGGAAGAACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGCAACGCGGTTTGGAGACGAACAGCTGCGACTATCTGGTTCACTTTGACGACT
ATTTCTGTCGCTCTTCTTAGAATATTGAGGGTCCAGGAATATTTGAATCTGCTTGACACTCATCGTAAGAAGGAACTGGAATTGGAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCACCATCCCTAAACCTCCTCTCGACCGATTGTCCTTGCCTATTTCTACCTCCTTGAAGTACCAGTCCGCTCCGGTAAATGTGCCCATAATGTCCAAGCCGGT
TCAGAGACACCACGAGATCGATGTGGATGATGTTGATGAAGGAGATGGGGAGATGTTGCCGCCGCATGAGATTGTCGCCAGAAGTTTGGCTCAGTCGCCGATGTTGTCTT
GCTCGGTGCTCGAGGGCGCTGGAAGAACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGCAACGCGGTTTGGAGACGAACAGCTGCGACTATCTGGTTCACTTTGACGACT
ATTTCTGTCGCTCTTCTTAGAATATTGAGGGTCCAGGAATATTTGAATCTGCTTGACACTCATCGTAAGAAGGAACTGGAATTGGAATTGTAA
Protein sequenceShow/hide protein sequence
MIPTIPKPPLDRLSLPISTSLKYQSAPVNVPIMSKPVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTAATIWFTLTT
ISVALLRILRVQEYLNLLDTHRKKELELEL