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Lag0025809 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025809
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr10:21359129..21359688
RNA-Seq ExpressionLag0025809
SyntenyLag0025809
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588985.1 Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1743.01Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------
        MT+INATL P ALAY VG T+SKQ W VL K YSSS R+N+VNLKSDLQ+ISKK  ESID Y+KRIKE+ KDKL N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------

Query:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHGFNQSG
                               EE+A+ KQ+K DD   QP  +  S  +   S  S    NF RGR  GRGR    G   F+  G
Subjt:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHGFNQSG

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]1.3e-1944.51Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------
        MTLINATL   ALAY V   +SKQ WEVLEKHYSS+ RTN+VNLKSDLQSI KK  ESID YVKRIKE+ KDK  N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------

Query:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHGF
                              +EE+AIEKQ K +D +TQP  +F S  +P S  R++ F +  +    GRG+N  RG   F
Subjt:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHGF

XP_022157455.1 uncharacterized protein LOC111024149 [Momordica charantia]8.8e-2144.81Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------
        MTLINATL P+A AY VG TSSK+ W+ LEKHYSSS RTN+VNLKSDLQSISKK+GE IDDYVKRIKE+ KDKL N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------

Query:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPN------SSQRSNPFGNFGRGRSSGRGRNQNR
                              +EE A+++Q K DD  +Q   +F + P P+      +S  S   GN G GR+ G   NQ R
Subjt:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPN------SSQRSNPFGNFGRGRSSGRGRNQNR

XP_022158689.1 uncharacterized protein LOC111025150 [Momordica charantia]2.7e-1772.37Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN
        MTL+NA L  +ALAY VG  SS+Q W+ L KHYSSS RTN+VNLKSDLQSISKK G SID YV+RIKEL KDKL N
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]5.4e-1843.65Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVNT-----------------------
        MTL+NATL P+ALAY VG  SS+Q W+ L K+YSSS RTN+VNLKS+LQSISKK GESID Y++RIKEL KDKL N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVNT-----------------------

Query:  -----------------------EEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHG
                               EEAAI+KQTKHD+   Q +T+  +  T    Q SNP        +  R R  N GG G
Subjt:  -----------------------EEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHG

TrEMBL top hitse value%identityAlignment
A0A5D3CLI6 T4.59.2e-1640.64Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------
        MT+INATL P ALAY VG TSSKQ W+VL K YSS  R+N+VNLKSDLQ+I KK  ESID Y+KRIKE+ KDKL N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------

Query:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQ-------PT-PNSSQRSNPFG-NFGRGRSSGRGRNQNRG
                               EE+A+ KQ+K DD+  QP  + +S        PT  N+  R N  G ++G GR S   + +  G
Subjt:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQ-------PT-PNSSQRSNPFG-NFGRGRSSGRGRNQNRG

A0A6J1D9L6 uncharacterized protein LOC1110188926.2e-2044.51Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------
        MTLINATL   ALAY V   +SKQ WEVLEKHYSS+ RTN+VNLKSDLQSI KK  ESID YVKRIKE+ KDK  N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------

Query:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHGF
                              +EE+AIEKQ K +D +TQP  +F S  +P S  R++ F +  +    GRG+N  RG   F
Subjt:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHGF

A0A6J1DT57 uncharacterized protein LOC1110241494.3e-2144.81Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------
        MTLINATL P+A AY VG TSSK+ W+ LEKHYSSS RTN+VNLKSDLQSISKK+GE IDDYVKRIKE+ KDKL N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN------------------------

Query:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPN------SSQRSNPFGNFGRGRSSGRGRNQNR
                              +EE A+++Q K DD  +Q   +F + P P+      +S  S   GN G GR+ G   NQ R
Subjt:  ----------------------TEEAAIEKQTKHDDALTQPATMFTSQPTPN------SSQRSNPFGNFGRGRSSGRGRNQNR

A0A6J1DYF1 uncharacterized protein LOC1110257092.6e-1843.65Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVNT-----------------------
        MTL+NATL P+ALAY VG  SS+Q W+ L K+YSSS RTN+VNLKS+LQSISKK GESID Y++RIKEL KDKL N                        
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVNT-----------------------

Query:  -----------------------EEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHG
                               EEAAI+KQTKHD+   Q +T+  +  T    Q SNP        +  R R  N GG G
Subjt:  -----------------------EEAAIEKQTKHDDALTQPATMFTSQPTPNSSQRSNPFGNFGRGRSSGRGRNQNRGGHG

A0A6J1E049 uncharacterized protein LOC1110251501.3e-1772.37Show/hide
Query:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN
        MTL+NA L  +ALAY VG  SS+Q W+ L KHYSSS RTN+VNLKSDLQSISKK G SID YV+RIKEL KDKL N
Subjt:  MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCTAATCAACGCCACACTCCCACCGGCAGCGTTGGCCTATGCTGTTGGTTATACATCATCCAAACAAGCTTGGGAAGTCTTGGAGAAGCACTATTCCTCAAGTTT
AAGAACCAACATCGTCAATCTAAAATCCGATCTTCAATCTATCTCTAAGAAACTGGGTGAGTCCATTGATGACTATGTTAAACGAATTAAGGAGCTTTTTAAGGACAAGT
TAGTTAATACCGAAGAAGCTGCCATTGAAAAACAGACGAAACATGATGATGCCCTAACTCAACCAGCAACTATGTTTACATCGCAACCAACTCCTAACTCTTCTCAACGT
TCAAATCCGTTTGGAAATTTTGGTAGAGGAAGATCATCTGGTCGTGGACGAAATCAAAACCGTGGTGGTCATGGCTTCAATCAATCTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGCTAATCAACGCCACACTCCCACCGGCAGCGTTGGCCTATGCTGTTGGTTATACATCATCCAAACAAGCTTGGGAAGTCTTGGAGAAGCACTATTCCTCAAGTTT
AAGAACCAACATCGTCAATCTAAAATCCGATCTTCAATCTATCTCTAAGAAACTGGGTGAGTCCATTGATGACTATGTTAAACGAATTAAGGAGCTTTTTAAGGACAAGT
TAGTTAATACCGAAGAAGCTGCCATTGAAAAACAGACGAAACATGATGATGCCCTAACTCAACCAGCAACTATGTTTACATCGCAACCAACTCCTAACTCTTCTCAACGT
TCAAATCCGTTTGGAAATTTTGGTAGAGGAAGATCATCTGGTCGTGGACGAAATCAAAACCGTGGTGGTCATGGCTTCAATCAATCTGGGTGA
Protein sequenceShow/hide protein sequence
MTLINATLPPAALAYAVGYTSSKQAWEVLEKHYSSSLRTNIVNLKSDLQSISKKLGESIDDYVKRIKELFKDKLVNTEEAAIEKQTKHDDALTQPATMFTSQPTPNSSQR
SNPFGNFGRGRSSGRGRNQNRGGHGFNQSG