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Lag0025815 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025815
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr10:21506422..21507255
RNA-Seq ExpressionLag0025815
SyntenyLag0025815
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0756372.1 hypothetical protein [Gossypium gossypioides]1.2e-0934.91Show/hide
Query:  LPERGF--EANMEK-LPLFVSAVIISQGWEHCVKSQNQSLFPWLLPTNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC
        +PE+GF  E+N +  +PL +   I +  W +   +++     ++  +  +T+S +R+LL+++I+   SI+VG+++ K+I  CA++K G ++FP+L+TSLC
Subjt:  LPERGF--EANMEK-LPLFVSAVIISQGWEHCVKSQNQSLFPWLLPTNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC

Query:  LKAQVR
        L+AQV+
Subjt:  LKAQVR

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]2.7e-0937.3Show/hide
Query:  ERGFEANMEKLPLFVSAVIISQG---WEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC-
        E   E N++  PL      ++     W H +KS+       LLP T+  TVSK+R+LL++S+L   SI+VGR++  EI ACA RK G LFFP+LIT LC 
Subjt:  ERGFEANMEKLPLFVSAVIISQG---WEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC-

Query:  -LKAQVRVDEDEVILIDKESIVQISK
          +A   V+E+++ +  +   + +++
Subjt:  -LKAQVRVDEDEVILIDKESIVQISK

XP_004514775.1 uncharacterized protein LOC101493401 isoform X2 [Cicer arietinum]7.9e-0936.61Show/hide
Query:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD
        N+ K+P F++   I + W   + ++       LLP +N  +V K+R+LL++ +++  SI+VG+++  EI+ACA  K+K+ RL FP+LI+ LC++  VRV+
Subjt:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD

Query:  EDEVILIDKESI
        +D+ ++I++E+I
Subjt:  EDEVILIDKESI

XP_004514776.1 uncharacterized protein LOC101493401 isoform X3 [Cicer arietinum]7.9e-0936.61Show/hide
Query:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD
        N+ K+P F++   I + W   + ++       LLP +N  +V K+R+LL++ +++  SI+VG+++  EI+ACA  K+K+ RL FP+LI+ LC++  VRV+
Subjt:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD

Query:  EDEVILIDKESI
        +D+ ++I++E+I
Subjt:  EDEVILIDKESI

XP_012575515.1 uncharacterized protein LOC101493401 isoform X1 [Cicer arietinum]7.9e-0936.61Show/hide
Query:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD
        N+ K+P F++   I + W   + ++       LLP +N  +V K+R+LL++ +++  SI+VG+++  EI+ACA  K+K+ RL FP+LI+ LC++  VRV+
Subjt:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD

Query:  EDEVILIDKESI
        +D+ ++I++E+I
Subjt:  EDEVILIDKESI

TrEMBL top hitse value%identityAlignment
A0A1S2Z472 uncharacterized protein LOC101493401 isoform X23.8e-0936.61Show/hide
Query:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD
        N+ K+P F++   I + W   + ++       LLP +N  +V K+R+LL++ +++  SI+VG+++  EI+ACA  K+K+ RL FP+LI+ LC++  VRV+
Subjt:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD

Query:  EDEVILIDKESI
        +D+ ++I++E+I
Subjt:  EDEVILIDKESI

A0A1S2Z475 uncharacterized protein LOC101493401 isoform X33.8e-0936.61Show/hide
Query:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD
        N+ K+P F++   I + W   + ++       LLP +N  +V K+R+LL++ +++  SI+VG+++  EI+ACA  K+K+ RL FP+LI+ LC++  VRV+
Subjt:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD

Query:  EDEVILIDKESI
        +D+ ++I++E+I
Subjt:  EDEVILIDKESI

A0A1S3EI57 uncharacterized protein LOC101493401 isoform X13.8e-0936.61Show/hide
Query:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD
        N+ K+P F++   I + W   + ++       LLP +N  +V K+R+LL++ +++  SI+VG+++  EI+ACA  K+K+ RL FP+LI+ LC++  VRV+
Subjt:  NMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACA--KRKQGRLFFPNLITSLCLKAQVRVD

Query:  EDEVILIDKESI
        +D+ ++I++E+I
Subjt:  EDEVILIDKESI

A0A2P5CEY2 Uncharacterized protein1.3e-0937.3Show/hide
Query:  ERGFEANMEKLPLFVSAVIISQG---WEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC-
        E   E N++  PL      ++     W H +KS+       LLP T+  TVSK+R+LL++S+L   SI+VGR++  EI ACA RK G LFFP+LIT LC 
Subjt:  ERGFEANMEKLPLFVSAVIISQG---WEHCVKSQNQSLFPWLLP-TNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC-

Query:  -LKAQVRVDEDEVILIDKESIVQISK
          +A   V+E+++ +  +   + +++
Subjt:  -LKAQVRVDEDEVILIDKESIVQISK

A0A7J9D6N4 Uncharacterized protein5.9e-1034.91Show/hide
Query:  LPERGF--EANMEK-LPLFVSAVIISQGWEHCVKSQNQSLFPWLLPTNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC
        +PE+GF  E+N +  +PL +   I +  W +   +++     ++  +  +T+S +R+LL+++I+   SI+VG+++ K+I  CA++K G ++FP+L+TSLC
Subjt:  LPERGF--EANMEK-LPLFVSAVIISQGWEHCVKSQNQSLFPWLLPTNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLC

Query:  LKAQVR
        L+AQV+
Subjt:  LKAQVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAAAGAGATCCTCTTCCAGAAAGAGGATTTGAGGCTAATATGGAGAAGCTACCTTTATTTGTTTCAGCCGTGATTATTAGTCAAGGTTGGGAACATTGTGTCAA
AAGCCAGAACCAGTCGTTATTCCCTTGGCTGCTCCCTACTAATGACACCACTGTGTCCAAGGAAAGGGTTCTATTGATCTTTTCTATCTTGAAGATTTTGAGCATCGATG
TTGGGAGGCTATTGGCAAAAGAAATTATGGCTTGTGCGAAAAGGAAACAAGGAAGGCTATTTTTCCCCAACCTTATTACATCATTGTGTTTGAAGGCCCAAGTGCGGGTT
GATGAGGATGAAGTGATCTTGATAGACAAGGAGAGCATAGTGCAAATCAGCAAAGGTCCTATTGGGAATACGTTCATCAAAGAGATTTTGCCATGGAAAGACTTTGAATA
TGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCTTCAAGATTATTTGATCCATGGTGCCCTTCCCCATCTCCAAGTGGGAACGATGATGATGTTGATGCTAGCC
AAGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCAAAAGAGATCCTCTTCCAGAAAGAGGATTTGAGGCTAATATGGAGAAGCTACCTTTATTTGTTTCAGCCGTGATTATTAGTCAAGGTTGGGAACATTGTGTCAA
AAGCCAGAACCAGTCGTTATTCCCTTGGCTGCTCCCTACTAATGACACCACTGTGTCCAAGGAAAGGGTTCTATTGATCTTTTCTATCTTGAAGATTTTGAGCATCGATG
TTGGGAGGCTATTGGCAAAAGAAATTATGGCTTGTGCGAAAAGGAAACAAGGAAGGCTATTTTTCCCCAACCTTATTACATCATTGTGTTTGAAGGCCCAAGTGCGGGTT
GATGAGGATGAAGTGATCTTGATAGACAAGGAGAGCATAGTGCAAATCAGCAAAGGTCCTATTGGGAATACGTTCATCAAAGAGATTTTGCCATGGAAAGACTTTGAATA
TGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCTTCAAGATTATTTGATCCATGGTGCCCTTCCCCATCTCCAAGTGGGAACGATGATGATGTTGATGCTAGCC
AAGAAGATTAG
Protein sequenceShow/hide protein sequence
MLKRDPLPERGFEANMEKLPLFVSAVIISQGWEHCVKSQNQSLFPWLLPTNDTTVSKERVLLIFSILKILSIDVGRLLAKEIMACAKRKQGRLFFPNLITSLCLKAQVRV
DEDEVILIDKESIVQISKGPIGNTFIKEILPWKDFEYGFEELPQPFPQFPSRLFDPWCPSPSPSGNDDDVDASQED