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Lag0025850 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025850
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionFanconi-associated nuclease
Genome locationchr10:22060529..22065258
RNA-Seq ExpressionLag0025850
SyntenyLag0025850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]6.1e-0431.43Show/hide
Query:  PRHFINVSAAENF-EEMKKRELLLQKGF---DSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVNFQDNGVWMTK--VRGQLVVWSPTTINEY
        PR FI+ +A   + + ++ +E  +++G    D N  ++P  L+  I  + W+ LC  P  AV  +VKEFY NF  +  W     VR   V +S   INE+
Subjt:  PRHFINVSAAENF-EEMKKRELLLQKGF---DSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVNFQDNGVWMTK--VRGQLVVWSPTTINEY

Query:  YDVSD
        + + +
Subjt:  YDVSD
MCI24195.1 hypothetical protein [Trifolium medium]2.1e-0431.36Show/hide
Query:  TRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEEMKKRELLLQKGFDSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVN----FQDNGVWM
        T ++A+ G G   V    +A R F N+   E F+E++KR++  +K FD   D      +V + N+ W KL + P     ++V+EFY N      +   + 
Subjt:  TRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEEMKKRELLLQKGFDSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVN----FQDNGVWM

Query:  TKVRGQLVVWSPTTINEY
        T VRG+ + +    INEY
Subjt:  TKVRGQLVVWSPTTINEY
XP_012832708.1 PREDICTED: uncharacterized protein LOC105953582 [Erythranthe guttata]6.1e-0427.78Show/hide
Query:  STKVVDKLTRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEE-----MKKRELLLQKGFDSNL-DNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFY
        S+KV +K+  R  QR     P+ +       F++  AA++F++     +++RELLL +  +  + DN        ++ + WQ     P  A  ++V+EF+
Subjt:  STKVVDKLTRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEE-----MKKRELLLQKGFDSNL-DNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFY

Query:  VN--FQDNGVWMTKVRGQLVVWSPTTINEYYDVSDYPLAIFNSMEIAPSNDQLQAALNYRGS
         N    DN     KVR  +V + P  IN Y+++ D  L  +N+++     D L   L  RG+
Subjt:  VN--FQDNGVWMTKVRGQLVVWSPTTINEYYDVSDYPLAIFNSMEIAPSNDQLQAALNYRGS
XP_012842756.1 PREDICTED: uncharacterized protein LOC105962958 [Erythranthe guttata]6.1e-0427.78Show/hide
Query:  STKVVDKLTRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEE-----MKKRELLLQKGFDSNL-DNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFY
        S+KV +K+  R  QR     P+ +       F++  AA++F++     +++RELLL +  +  + DN        ++ + WQ     P  A  ++V+EF+
Subjt:  STKVVDKLTRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEE-----MKKRELLLQKGFDSNL-DNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFY

Query:  VN--FQDNGVWMTKVRGQLVVWSPTTINEYYDVSDYPLAIFNSMEIAPSNDQLQAALNYRGS
         N    DN     KVR  +V + P  IN Y+++ D  L  +N+++     D L   L  RG+
Subjt:  VN--FQDNGVWMTKVRGQLVVWSPTTINEYYDVSDYPLAIFNSMEIAPSNDQLQAALNYRGS
TrEMBL top hitse value%identityAlignment
A0A392QLN1 Uncharacterized protein (Fragment)1.0e-0431.36Show/hide
Query:  TRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEEMKKRELLLQKGFDSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVN----FQDNGVWM
        T ++A+ G G   V    +A R F N+   E F+E++KR++  +K FD   D      +V + N+ W KL + P     ++V+EFY N      +   + 
Subjt:  TRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEEMKKRELLLQKGFDSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVN----FQDNGVWM

Query:  TKVRGQLVVWSPTTINEY
        T VRG+ + +    INEY
Subjt:  TKVRGQLVVWSPTTINEY
A0A7J6G6G2 Fanconi-associated nuclease2.9e-0431.43Show/hide
Query:  PRHFINVSAAENF-EEMKKRELLLQKGF---DSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVNFQDNGVWMTK--VRGQLVVWSPTTINEY
        PR FI+ +A   + + ++ +E  +++G    D N  ++P  L+  I  + W+ LC  P  AV  +VKEFY NF  +  W     VR   V +S   INE+
Subjt:  PRHFINVSAAENF-EEMKKRELLLQKGF---DSNLDNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVNFQDNGVWMTK--VRGQLVVWSPTTINEY

Query:  YDVSD
        + + +
Subjt:  YDVSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCGATGAAAATCGCGGGAGAAATTTGCCATTTTCGTATTGTATAGTCGTTGTTTCTGCCCAGAAATTAGCTCCAGACGCATCAGCGTCAGGACGCTTGGCCTT
GCGCGTTCTGACGCGGTTGCTTAAGCGTCTTGACGTTGTCACGATTTCATGCGGCACTAGTGTTTTTCGTGGAGACGAGGTTGCGACCCTAATTTCCAGTCCGGTTCGTG
ATTTTTGGTTGAGCTGGGACCGATTTGGTCCGGTTTTGGTGCGGTTTGAGGTTTTCAAGGCAGGTTCGAAGCGGTTTGGCCCAAGGTGGGGTCTTCCTCATTCCTTCCTT
CTTCCCCAACCCGATAGCAGCCTCCAAGACCCACGTCGACAGTTTTTCCAGCGACACCCGGTGACTGAAACAGCTCCGACCAGATCGATGACTCTCCCTCCGGCAAGTGT
GTCTCTTCCGGCAGCAGCAACGACTTCGGCGTCTCCAGCGAGTAGGTTCTCGACGTTGCAGTGGTGGCAGTTTCATTCCTCGAGGTTTTCGGTGTCGATAGCAGCCCTCC
AGTGGCGTTTTGGTCCAAGCGACAGTTCGTGGTGTCGTCGGCGATCAGGATCGTTCACGGTAGTGAAGTTGCAGCAGCTGTCGACGTGTTGCAGGTGGAATCTCGCGTCA
TTTTCGCGTCATCTACGTCGGACAGCACCTGTGACTGCATTTTTCGGCGATTTCGGACGTGTCCAGCGATGTGGTGTTTGGTTCCAAGAGCGATTCATCAAGGTCGAAGT
CGACTTTGCTGATTATAGATTAACTGATAAAGCTATAGAAATATCAACAAAAGTTGTTGATAAGTTAACAAGGAGGAGAGCTCAGCGAGGAAAAGGGAAAGAGCCCGTGG
TGGAAAAGAGGGAAGCTCCAAGACATTTCATTAATGTGTCAGCAGCTGAAAATTTTGAAGAAATGAAGAAAAGAGAGTTGTTGCTTCAGAAGGGATTCGACTCTAATCTG
GACAATTTGCCTCATATGTTAGTTGTAACCATAGTAAACCAATATTGGCAAAAGCTGTGTAGTAAGCCGGAACCAGCAGTGTCCAATATTGTCAAAGAGTTTTATGTCAA
CTTTCAAGATAATGGGGTTTGGATGACTAAGGTCCGCGGACAGCTCGTTGTGTGGAGTCCAACCACTATAAATGAATATTATGACGTGTCGGATTATCCTCTTGCCATAT
TCAACTCCATGGAGATTGCACCCTCCAATGATCAACTTCAGGCAGCATTGAACTACAGAGGGAGCATGTTGGAAGATCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATCGATGAAAATCGCGGGAGAAATTTGCCATTTTCGTATTGTATAGTCGTTGTTTCTGCCCAGAAATTAGCTCCAGACGCATCAGCGTCAGGACGCTTGGCCTT
GCGCGTTCTGACGCGGTTGCTTAAGCGTCTTGACGTTGTCACGATTTCATGCGGCACTAGTGTTTTTCGTGGAGACGAGGTTGCGACCCTAATTTCCAGTCCGGTTCGTG
ATTTTTGGTTGAGCTGGGACCGATTTGGTCCGGTTTTGGTGCGGTTTGAGGTTTTCAAGGCAGGTTCGAAGCGGTTTGGCCCAAGGTGGGGTCTTCCTCATTCCTTCCTT
CTTCCCCAACCCGATAGCAGCCTCCAAGACCCACGTCGACAGTTTTTCCAGCGACACCCGGTGACTGAAACAGCTCCGACCAGATCGATGACTCTCCCTCCGGCAAGTGT
GTCTCTTCCGGCAGCAGCAACGACTTCGGCGTCTCCAGCGAGTAGGTTCTCGACGTTGCAGTGGTGGCAGTTTCATTCCTCGAGGTTTTCGGTGTCGATAGCAGCCCTCC
AGTGGCGTTTTGGTCCAAGCGACAGTTCGTGGTGTCGTCGGCGATCAGGATCGTTCACGGTAGTGAAGTTGCAGCAGCTGTCGACGTGTTGCAGGTGGAATCTCGCGTCA
TTTTCGCGTCATCTACGTCGGACAGCACCTGTGACTGCATTTTTCGGCGATTTCGGACGTGTCCAGCGATGTGGTGTTTGGTTCCAAGAGCGATTCATCAAGGTCGAAGT
CGACTTTGCTGATTATAGATTAACTGATAAAGCTATAGAAATATCAACAAAAGTTGTTGATAAGTTAACAAGGAGGAGAGCTCAGCGAGGAAAAGGGAAAGAGCCCGTGG
TGGAAAAGAGGGAAGCTCCAAGACATTTCATTAATGTGTCAGCAGCTGAAAATTTTGAAGAAATGAAGAAAAGAGAGTTGTTGCTTCAGAAGGGATTCGACTCTAATCTG
GACAATTTGCCTCATATGTTAGTTGTAACCATAGTAAACCAATATTGGCAAAAGCTGTGTAGTAAGCCGGAACCAGCAGTGTCCAATATTGTCAAAGAGTTTTATGTCAA
CTTTCAAGATAATGGGGTTTGGATGACTAAGGTCCGCGGACAGCTCGTTGTGTGGAGTCCAACCACTATAAATGAATATTATGACGTGTCGGATTATCCTCTTGCCATAT
TCAACTCCATGGAGATTGCACCCTCCAATGATCAACTTCAGGCAGCATTGAACTACAGAGGGAGCATGTTGGAAGATCTCTAA
Protein sequenceShow/hide protein sequence
MKIDENRGRNLPFSYCIVVVSAQKLAPDASASGRLALRVLTRLLKRLDVVTISCGTSVFRGDEVATLISSPVRDFWLSWDRFGPVLVRFEVFKAGSKRFGPRWGLPHSFL
LPQPDSSLQDPRRQFFQRHPVTETAPTRSMTLPPASVSLPAAATTSASPASRFSTLQWWQFHSSRFSVSIAALQWRFGPSDSSWCRRRSGSFTVVKLQQLSTCCRWNLAS
FSRHLRRTAPVTAFFGDFGRVQRCGVWFQERFIKVEVDFADYRLTDKAIEISTKVVDKLTRRRAQRGKGKEPVVEKREAPRHFINVSAAENFEEMKKRELLLQKGFDSNL
DNLPHMLVVTIVNQYWQKLCSKPEPAVSNIVKEFYVNFQDNGVWMTKVRGQLVVWSPTTINEYYDVSDYPLAIFNSMEIAPSNDQLQAALNYRGSMLEDL