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Lag0025853 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025853
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr10:22164084..22169127
RNA-Seq ExpressionLag0025853
SyntenyLag0025853
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC10042.1 Cysteine desulfurase 2 [Morus notabilis]1.9e-1663.49Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +W+KR+ EE K P   P+++YCDNKAAI+I +NPV HDRTKH+E+D+HFIKEKID GAI + F
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

MCH80620.1 cysteine-rich RLK (receptor-like protein kinase) 8 [Trifolium medium]3.3e-1666.67Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +WIK+  EE K P   PI+ YCDNKAAISI  NPV HDRTKH+EVDKHFIKEKID+G I + +
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

RVX10880.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]5.0e-1763.49Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +WI+R+PEE K   + P+++YCDNKAAIS+  NPVLHDRTKH+EVDKHFIKEKID G + + +
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

XP_019054402.1 PREDICTED: uncharacterized protein LOC109115164 [Nelumbo nucifera]2.3e-1768.25Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +WIKR+ EE K P   PI++YCDNKA ISI  NPVLHDRTKH+EVDKHFIKEKID+G I + +
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

XP_039037215.1 probable galacturonosyltransferase 6 [Hibiscus syriacus]3.3e-1666.67Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +WIKRI EE KF  + PI++YCDNKAAI+I  NPVLHDRTKHIEVDKHFI EK++ G I + +
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

TrEMBL top hitse value%identityAlignment
A0A1S8ACK5 Cysteine-rich RLK RECEPTOR-like protein kinase3.2e-1764.18Show/hide
Query:  VFKGIWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        + + IWIKR+  + K P + P++IYCDNKAAISI  NPVLHDRTKHIEVDKHFIKEKI++G I + +
Subjt:  VFKGIWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

A0A1U8Q723 uncharacterized protein LOC1091151641.1e-1768.25Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +WIKR+ EE K P   PI++YCDNKA ISI  NPVLHDRTKH+EVDKHFIKEKID+G I + +
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

A0A392M017 Cysteine-rich RLK (Receptor-like protein kinase) 81.6e-1666.67Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +WIK+  EE K P   PI+ YCDNKAAISI  NPV HDRTKH+EVDKHFIKEKID+G I + +
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

A0A438JPI4 Retrovirus-related Pol polyprotein from transposon RE12.4e-1763.49Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +WI+R+PEE K   + P+++YCDNKAAIS+  NPVLHDRTKH+EVDKHFIKEKID G + + +
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

W9SIB2 Cysteine desulfurase 29.2e-1763.49Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        +W+KR+ EE K P   P+++YCDNKAAI+I +NPV HDRTKH+E+D+HFIKEKID GAI + F
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.9e-0732.98Show/hide
Query:  IC-SIKRRVLVAVIFCQTEVLVKRIKNVFKGIWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF
        IC + KR+  VA    + E +    + V + +W+K +          PI+IY DN+  ISI  NP  H R KHI++  HF +E++    I L++
Subjt:  IC-SIKRRVLVAVIFCQTEVLVKRIKNVFKGIWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAIWLKF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-0645.45Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKID
        IW+KR  +E    Q K   +YCD+++AI + KN + H RTKHI+V  H+I+E +D
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKID

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.9e-0735.44Show/hide
Query:  VIFCQTEVLVKRIKNVFKGI-WIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAI
        V+   TE   + + N    + WI  +  E      +P  IYCDN  A  +  NPV H R KHI +D HFI+ ++ +GA+
Subjt:  VIFCQTEVLVKRIKNVFKGI-WIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE28.3e-0735.44Show/hide
Query:  VIFCQTEVLVKRIKNVFKGI-WIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAI
        V+   TE   + + N    + WI  +  E     + P  IYCDN  A  +  NPV H R KHI +D HFI+ ++ +GA+
Subjt:  VIFCQTEVLVKRIKNVFKGI-WIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEKIDTGAI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.1e-0945.28Show/hide
Query:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEK
        +W+ +   E + P +KP  ++CDN AAI I  N V H+RTKHIE D H ++E+
Subjt:  IWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEVDKHFIKEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTACCCTCTTTATTGCACGAGAGGGACATCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGGAGATTTG
CAGCATCAAAAGAAGAGTACTTGTTGCTGTAATTTTCTGTCAAACCGAGGTTTTGGTGAAGCGGATCAAGAACGTCTTCAAAGGCATATGGATCAAAAGAATACCTGAAG
AATTCAAGTTCCCTCAGGCTAAGCCTATTCGAATTTATTGTGACAATAAGGCTGCCATATCTATAGTTAAGAATCCAGTTCTACACGATAGAACAAAACATATTGAGGTT
GACAAACACTTTATTAAAGAAAAGATTGATACTGGTGCAATATGGCTGAAATTTTCTGGACCTTGGATTGCAATTCTTCCATTGCTTGATCACGCTTCCAACCTGTTGAG
GATGAGCTCATGGTTGACTGGGTTGAGGAGTTACACCAAGAGTTTCGTCCTCATCTTGAGGAGTAAGGCTCGGGTGGATGCTCATCATCATGCATTGGATTTCCAAGTTG
GTGACCTTGTTATGGTGCATTTAAAGAAGTCTCACCTACCCCCCCGGTGTTCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTACCCTCTTTATTGCACGAGAGGGACATCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGGAGATTTG
CAGCATCAAAAGAAGAGTACTTGTTGCTGTAATTTTCTGTCAAACCGAGGTTTTGGTGAAGCGGATCAAGAACGTCTTCAAAGGCATATGGATCAAAAGAATACCTGAAG
AATTCAAGTTCCCTCAGGCTAAGCCTATTCGAATTTATTGTGACAATAAGGCTGCCATATCTATAGTTAAGAATCCAGTTCTACACGATAGAACAAAACATATTGAGGTT
GACAAACACTTTATTAAAGAAAAGATTGATACTGGTGCAATATGGCTGAAATTTTCTGGACCTTGGATTGCAATTCTTCCATTGCTTGATCACGCTTCCAACCTGTTGAG
GATGAGCTCATGGTTGACTGGGTTGAGGAGTTACACCAAGAGTTTCGTCCTCATCTTGAGGAGTAAGGCTCGGGTGGATGCTCATCATCATGCATTGGATTTCCAAGTTG
GTGACCTTGTTATGGTGCATTTAAAGAAGTCTCACCTACCCCCCCGGTGTTCATTCTAA
Protein sequenceShow/hide protein sequence
MGPTLFIAREGHLFVGWTSNRLFIRGALVLKDQEEICSIKRRVLVAVIFCQTEVLVKRIKNVFKGIWIKRIPEEFKFPQAKPIRIYCDNKAAISIVKNPVLHDRTKHIEV
DKHFIKEKIDTGAIWLKFSGPWIAILPLLDHASNLLRMSSWLTGLRSYTKSFVLILRSKARVDAHHHALDFQVGDLVMVHLKKSHLPPRCSF