; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025854 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025854
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:22174688..22176424
RNA-Seq ExpressionLag0025854
SyntenyLag0025854
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW41094.1 hypothetical protein CK203_069772 [Vitis vinifera]2.7e-0436.04Show/hide
Query:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK
        RF   QEGS C +FLA +Q  TM+ YR+EFE LA                        AE+R LKP GL  +M+  Q +EDRN    A  +  N  N  K
Subjt:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK

Query:  NSVTRIGSHRG
        ++     ++RG
Subjt:  NSVTRIGSHRG

RVX01070.1 hypothetical protein CK203_022817 [Vitis vinifera]2.1e-0436.04Show/hide
Query:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK
        RF   QEGS C +FLA +Q  TM+ YR+EFE LA                        AE+R LKP GL  +M+  Q +EDRN    A  +  N  N  K
Subjt:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK

Query:  NSVTRIGSHRG
        ++     ++RG
Subjt:  NSVTRIGSHRG

XP_022154744.1 uncharacterized protein LOC111021922 [Momordica charantia]4.2e-0539.39Show/hide
Query:  KITFKRLSKGWQEGDQGYLIELRALVAKNEEDEGLKELMNNNLPNKMKRLISKYKEVFDAPKGLPP
        ++T K+L++ W+  DQG+L+ELRA  A+ E  E ++ ++ N    +++ LI+ Y EVF  P  LPP
Subjt:  KITFKRLSKGWQEGDQGYLIELRALVAKNEEDEGLKELMNNNLPNKMKRLISKYKEVFDAPKGLPP

XP_022897442.1 uncharacterized protein LOC111411108 [Olea europaea var. sylvestris]3.8e-0641.86Show/hide
Query:  MIGRFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRN
        ++ RF  +QEGS CA+FL+ +Q  T+ EYR+ FE LA+                       AEV+ L+PLGLEQIM+  Q++EDRN
Subjt:  MIGRFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRN

XP_024017591.1 uncharacterized protein LOC112090471 [Morus notabilis]3.2e-0536.45Show/hide
Query:  MIGRFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAAL----------------------AEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTN
        ++ RF   QEG+ C KFL+  Q  T+ EYR++FE LAAL                      AEVR +KP GL +IM+ TQ +E+RN      K Q +S N
Subjt:  MIGRFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAAL----------------------AEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTN

Query:  QSKNSVT
            +++
Subjt:  QSKNSVT

TrEMBL top hitse value%identityAlignment
A0A438E000 Retrotrans_gag domain-containing protein1.3e-0436.04Show/hide
Query:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK
        RF   QEGS C +FLA +Q  TM+ YR+EFE LA                        AE+R LKP GL  +M+  Q +EDRN    A  +  N  N  K
Subjt:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK

Query:  NSVTRIGSHRG
        ++     ++RG
Subjt:  NSVTRIGSHRG

A0A438IWF3 Retrotrans_gag domain-containing protein1.0e-0436.04Show/hide
Query:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK
        RF   QEGS C +FLA +Q  TM+ YR+EFE LA                        AE+R LKP GL  +M+  Q +EDRN    A  +  N  N  K
Subjt:  RFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAA----------------------LAEVRCLKPLGLEQIMKTTQLIEDRNTTWEACKDQRNSTNQSK

Query:  NSVTRIGSHRG
        ++     ++RG
Subjt:  NSVTRIGSHRG

A0A6J1DN22 Reverse transcriptase2.0e-0539.39Show/hide
Query:  KITFKRLSKGWQEGDQGYLIELRALVAKNEEDEGLKELMNNNLPNKMKRLISKYKEVFDAPKGLPP
        ++T K+L++ W+  DQG+L+ELRA  A+ E  E ++ ++ N    +++ LI+ Y EVF  P  LPP
Subjt:  KITFKRLSKGWQEGDQGYLIELRALVAKNEEDEGLKELMNNNLPNKMKRLISKYKEVFDAPKGLPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGGAGACTGGTCGGAGAAGAAACGTCCGCAAGGAAGAAGAAAAACCCAAATGGCTGGCAGCGAAAAGAAAAAACCACGGGGAGGCGACAATTGACGGAGGCGA
CGGCGTGACAATGATTGGAAGATTCATGCTGGCACAAGAAGGAAGCCCTTGCGCCAAGTTCTTAGCGGGCAAACAGCATAACACAATGATGGAATATCGCAAGGAATTTG
AAGAGCTCGCCGCACTAGCTGAAGTAAGATGTTTAAAACCTTTGGGCCTCGAACAAATAATGAAGACGACCCAACTGATCGAAGATCGAAATACCACTTGGGAAGCCTGC
AAGGACCAAAGGAACTCCACAAACCAATCCAAGAATTCAGTTACAAGGATTGGTAGTCACAGAGGATTTTTTGCCAATAGAATTAGGAGAATTGGACCTCGTGTTAGGAA
TACAGTGGCTACGCACTTTGGGCTCAATGAAAGTCAATTGGAGGACTTTAACCATGACCTTTTTCCAGAAAAAAGAGCGAATTTTGCTACATGGAGATCCATCGTTGACC
AAGGAAAAATAACATTCAAACGTTTATCCAAGGGATGGCAAGAAGGTGATCAGGGATACTTGATTGAGTTACGCGCACTAGTAGCAAAAAATGAAGAAGACGAAGGCTTA
AAGGAACTGATGAACAATAACCTTCCAAACAAAATGAAGAGGTTGATATCCAAGTACAAAGAGGTATTTGATGCTCCAAAAGGACTTCCCCCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATGGAGACTGGTCGGAGAAGAAACGTCCGCAAGGAAGAAGAAAAACCCAAATGGCTGGCAGCGAAAAGAAAAAACCACGGGGAGGCGACAATTGACGGAGGCGA
CGGCGTGACAATGATTGGAAGATTCATGCTGGCACAAGAAGGAAGCCCTTGCGCCAAGTTCTTAGCGGGCAAACAGCATAACACAATGATGGAATATCGCAAGGAATTTG
AAGAGCTCGCCGCACTAGCTGAAGTAAGATGTTTAAAACCTTTGGGCCTCGAACAAATAATGAAGACGACCCAACTGATCGAAGATCGAAATACCACTTGGGAAGCCTGC
AAGGACCAAAGGAACTCCACAAACCAATCCAAGAATTCAGTTACAAGGATTGGTAGTCACAGAGGATTTTTTGCCAATAGAATTAGGAGAATTGGACCTCGTGTTAGGAA
TACAGTGGCTACGCACTTTGGGCTCAATGAAAGTCAATTGGAGGACTTTAACCATGACCTTTTTCCAGAAAAAAGAGCGAATTTTGCTACATGGAGATCCATCGTTGACC
AAGGAAAAATAACATTCAAACGTTTATCCAAGGGATGGCAAGAAGGTGATCAGGGATACTTGATTGAGTTACGCGCACTAGTAGCAAAAAATGAAGAAGACGAAGGCTTA
AAGGAACTGATGAACAATAACCTTCCAAACAAAATGAAGAGGTTGATATCCAAGTACAAAGAGGTATTTGATGCTCCAAAAGGACTTCCCCCTCATTGA
Protein sequenceShow/hide protein sequence
MVMETGRRRNVRKEEEKPKWLAAKRKNHGEATIDGGDGVTMIGRFMLAQEGSPCAKFLAGKQHNTMMEYRKEFEELAALAEVRCLKPLGLEQIMKTTQLIEDRNTTWEAC
KDQRNSTNQSKNSVTRIGSHRGFFANRIRRIGPRVRNTVATHFGLNESQLEDFNHDLFPEKRANFATWRSIVDQGKITFKRLSKGWQEGDQGYLIELRALVAKNEEDEGL
KELMNNNLPNKMKRLISKYKEVFDAPKGLPPH