; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025857 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025857
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:22202382..22203111
RNA-Seq ExpressionLag0025857
SyntenyLag0025857
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]5.8e-4768.53Show/hide
Query:  LAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAATS
        LAQAFL K+FPPAK+ +LR EIGTFRQL++EQLYEA ERYK++LRRCPQHGY DWLQ+QLFYNGL  STK +LD +AGGS  SK   EA  +LE++A TS
Subjt:  LAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAATS

Query:  YQWPTERGA--ISKKAGIYELDESSSLKAQMASLTNVLNKLTS
        Y WP ER +  I K AG+YE+DE +SLKAQMASLTN L+KLT+
Subjt:  YQWPTERGA--ISKKAGIYELDESSSLKAQMASLTNVLNKLTS

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]9.6e-4260.99Show/hide
Query:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT
        E+ QAFLT FFPPAKTT+LR EI +FR+ D EQL+E  ERYKE+LR+CPQHG L+WLQ+Q+FYNGLN  T+ +LD +AGG+ LS+T   A  LL++MA  
Subjt:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT

Query:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLT
        S+QWP+ER    K AG+YE+DE SSLKAQ+ +LTN ++KL+
Subjt:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLT

XP_022866538.1 uncharacterized protein LOC111386305 [Olea europaea var. sylvestris]3.6e-4162.41Show/hide
Query:  LAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAATS
        LA+ FLTKFFPP+K  +LR EIG FRQLD E  YEA ERYK++ RRCPQHGY DWLQ Q FYNGLN  T+IV+D++ GG+ LSKT  EA  LL+E+A  S
Subjt:  LAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAATS

Query:  YQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTS
        YQWP+ER +  K AG+YE+D  + L AQM+SLTN +  LTS
Subjt:  YQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTS

XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber]1.2e-3956.76Show/hide
Query:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT
        ++A+ FL KFFPPAKT +LR EIG FRQ D E LYEA ERYK+++R CPQHG LDWLQVQ+FYNGLN  T+ ++D ++GG+ +SKT   A  LLEEMA+ 
Subjt:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT

Query:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTSSEVVTS
         YQWPTER    K AGI+EL+  ++L AQ+ASL++ ++ LT+  +  S
Subjt:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTSSEVVTS

XP_024030361.1 uncharacterized protein LOC112094221 [Morus notabilis]2.0e-3954.36Show/hide
Query:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT
        ELAQ FLTKFFPP+KT  LR EI  FRQ+D E LYEA ER+KE+LR+CPQHGY DW Q+Q+FYNG N  T+ ++D ++GG  LSKT  EA+ LLEEMA+ 
Subjt:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT

Query:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTSSEVVTSR
        + QWP+ER ++ +  G++E+D   +  AQ+++LTN +++LT+ E  +S+
Subjt:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTSSEVVTSR

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047126.5e-3652.7Show/hide
Query:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT
        ++A+ F  KFFPPAKTT+LR EIG F+Q D E LYEA E YK+++RRCPQHG  DWLQVQ+FYNGLN  T+ ++D ++GG+ + KT+  A  LLEEMA+ 
Subjt:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT

Query:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTSSEVVTS
        +YQWP ER    K A I+EL+  ++L AQ+A+L++ ++ LT+  +  S
Subjt:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLTSSEVVTS

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129452.2e-3655.32Show/hide
Query:  DELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAA
        ++LAQ FL KFFPPAKT K+R +I +F Q D E LYEA ER+KE+LRRCP HG  DWLQVQ FYNGL  S K ++D +AGG+ +SK   +A +LLEEMA+
Subjt:  DELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAA

Query:  TSYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKL
         +YQWP+ER    K  G YE+D   +L  Q+A+L+  L+ L
Subjt:  TSYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKL

A0A6J0ZYV0 uncharacterized protein LOC1104134132.2e-3655.32Show/hide
Query:  DELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAA
        ++LAQ FL KFFPPAKT K+R +I +F Q D E LYEA ER+KE+LRRCP HG  DWLQVQ FYNGL  S K ++D +AGG+ +SK   +A +LLEEMA+
Subjt:  DELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAA

Query:  TSYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKL
         +YQWP+ER    K  G YE+D   +L  Q+A+L+  L+ L
Subjt:  TSYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKL

A0A6J1DU19 uncharacterized protein LOC1110243614.6e-4260.99Show/hide
Query:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT
        E+ QAFLT FFPPAKTT+LR EI +FR+ D EQL+E  ERYKE+LR+CPQHG L+WLQ+Q+FYNGLN  T+ +LD +AGG+ LS+T   A  LL++MA  
Subjt:  ELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAAT

Query:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLT
        S+QWP+ER    K AG+YE+DE SSLKAQ+ +LTN ++KL+
Subjt:  SYQWPTERGAISKKAGIYELDESSSLKAQMASLTNVLNKLT

A0A803PT47 Uncharacterized protein2.5e-3553.68Show/hide
Query:  DELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAA
        DE+A+ F+ KFFPP+K+ +LR EIG FR LD E  YEA ER K++LR  PQHGY  W+QV +FYNGLN  T+ ++D + GG+ LSK +TEA +LLEEMA 
Subjt:  DELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAA

Query:  TSYQWPTERGAISKKAGIYELDESSSLKAQMASLTN
         SY WP ER    K AG++E+D  +++ AQ+++L+N
Subjt:  TSYQWPTERGAISKKAGIYELDESSSLKAQMASLTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGCTTGCCCAGGCTTTTCTGACGAAATTTTTCCCGCCTGCCAAGACTACCAAACTCCGGATTGAAATTGGAACGTTTAGGCAGCTTGATGAGGAGCAGTTGTA
TGAGGCATGTGAGAGATACAAGGAGATGCTTAGGCGGTGCCCCCAACATGGATATCTGGATTGGCTCCAAGTGCAGTTGTTTTACAATGGATTGAATCCCTCCACCAAGA
TAGTTCTAGACACATCAGCTGGAGGAAGTTTTCTTTCCAAGACAGTAACAGAAGCCAAAGATCTGCTTGAGGAAATGGCGGCAACCAGTTATCAGTGGCCGACCGAGAGG
GGAGCAATTTCTAAGAAGGCTGGAATTTATGAATTAGATGAGTCGAGTTCGTTGAAGGCACAGATGGCATCTTTGACCAACGTCTTGAACAAGCTGACTTCGTCTGAGGT
GGTCACATCTAGGGGTGTTCAACATAACCCCAAAACCGACCCGACCGCCCAAAACCGACCGAACCGACGTCGGTGGGTCGGTTTAGAGGGCATGTCGGTGGTTTTGGTGC
CCATGGTTTTTTCAAAACCACCTTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGCTTGCCCAGGCTTTTCTGACGAAATTTTTCCCGCCTGCCAAGACTACCAAACTCCGGATTGAAATTGGAACGTTTAGGCAGCTTGATGAGGAGCAGTTGTA
TGAGGCATGTGAGAGATACAAGGAGATGCTTAGGCGGTGCCCCCAACATGGATATCTGGATTGGCTCCAAGTGCAGTTGTTTTACAATGGATTGAATCCCTCCACCAAGA
TAGTTCTAGACACATCAGCTGGAGGAAGTTTTCTTTCCAAGACAGTAACAGAAGCCAAAGATCTGCTTGAGGAAATGGCGGCAACCAGTTATCAGTGGCCGACCGAGAGG
GGAGCAATTTCTAAGAAGGCTGGAATTTATGAATTAGATGAGTCGAGTTCGTTGAAGGCACAGATGGCATCTTTGACCAACGTCTTGAACAAGCTGACTTCGTCTGAGGT
GGTCACATCTAGGGGTGTTCAACATAACCCCAAAACCGACCCGACCGCCCAAAACCGACCGAACCGACGTCGGTGGGTCGGTTTAGAGGGCATGTCGGTGGTTTTGGTGC
CCATGGTTTTTTCAAAACCACCTTGGTTTTAA
Protein sequenceShow/hide protein sequence
MDELAQAFLTKFFPPAKTTKLRIEIGTFRQLDEEQLYEACERYKEMLRRCPQHGYLDWLQVQLFYNGLNPSTKIVLDTSAGGSFLSKTVTEAKDLLEEMAATSYQWPTER
GAISKKAGIYELDESSSLKAQMASLTNVLNKLTSSEVVTSRGVQHNPKTDPTAQNRPNRRRWVGLEGMSVVLVPMVFSKPPWF