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Lag0025867 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025867
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr10:22550342..22550996
RNA-Seq ExpressionLag0025867
SyntenyLag0025867
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.9e-1845.04Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        AV GA W +S       + + L P A VW  F +S LLPTTH  T+SK+R+LL+ S+    SI+VGR++  EI AC  RK G LFFP+LIT LC  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT
           +EE L + G ID+   A I  + PT +T
Subjt:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.4e-1945.04Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A  GA W +S       + + L P A VW+ F +SRLLPTTH  T+SK+R+LL+ S+    SI+VGR++  EI AC  RK G LFFP+LIT LC  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT
           +EE L + G ID+   A I  + PT +T
Subjt:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]6.4e-1943.7Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A+ GA W +S   +   L + L P A +W+ F +SRLLPTTH   +SKERVLL++S+    SI++GR++ +EI AC  RK G LFFP+LI  +C  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDSASI
           +EE L + G ID+ ++
Subjt:  VDEDEEILMDKGIIDSASI

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.1e-1845.38Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A+ GA W +S       L + L P A VW+ F +SRLLPTTH  T+SKERVLL++S+    SI+VG+++ +EI A   RK G LFFP+LIT +C  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDSASI
           +EE L + G ID+ ++
Subjt:  VDEDEEILMDKGIIDSASI

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.2e-1743.51Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A  GA W +S       + + L P A VW+ F +SRLLPTTH   +SK+R+LL+ S+    SI+VGR++  EI AC  +K G LFFP+LIT LC  A   
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT
        V+E++  L + G ID+   A I  + PT +T
Subjt:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)9.1e-1945.04Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        AV GA W +S       + + L P A VW  F +S LLPTTH  T+SK+R+LL+ S+    SI+VGR++  EI AC  RK G LFFP+LIT LC  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT
           +EE L + G ID+   A I  + PT +T
Subjt:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT

A0A2P5BCG4 Uncharacterized protein (Fragment)3.1e-1945.04Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A  GA W +S       + + L P A VW+ F +SRLLPTTH  T+SK+R+LL+ S+    SI+VGR++  EI AC  RK G LFFP+LIT LC  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT
           +EE L + G ID+   A I  + PT +T
Subjt:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT

A0A2P5BNT0 Uncharacterized protein (Fragment)3.1e-1943.7Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A+ GA W +S   +   L + L P A +W+ F +SRLLPTTH   +SKERVLL++S+    SI++GR++ +EI AC  RK G LFFP+LI  +C  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDSASI
           +EE L + G ID+ ++
Subjt:  VDEDEEILMDKGIIDSASI

A0A2P5CPE8 Uncharacterized protein5.3e-1945.38Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A+ GA W +S       L + L P A VW+ F +SRLLPTTH  T+SKERVLL++S+    SI+VG+++ +EI A   RK G LFFP+LIT +C  A+  
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDSASI
           +EE L + G ID+ ++
Subjt:  VDEDEEILMDKGIIDSASI

A0A2P5DXM3 Uncharacterized protein5.9e-1843.51Show/hide
Query:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ
        A  GA W +S       + + L P A VW+ F +SRLLPTTH   +SK+R+LL+ S+    SI+VGR++  EI AC  +K G LFFP+LIT LC  A   
Subjt:  AVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQ

Query:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT
        V+E++  L + G ID+   A I  + PT +T
Subjt:  VDEDEEILMDKGIIDS---ASIVSKRPTGNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCAGTTGAAGGAGCAAGCTGGAAAATGTCAAGGAACTCCATCCGAATTTTGTTGGCAGCTTACCTAAAGCCCGAAGCAAATGTATGGCATACCTTTGCAAGGAG
TAGGTTGCTCCCTACCACTCATGACACCACTATGTCTAAAGAAAGAGTTCTCTTAGTTTTTTCCATCTTTAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGG
AGATTTTGGCGTGTGGAAAAAGGAAGGTAGGAAGGCTATTTTTCCCAAATCTTATTACAACATTGTGTTTGAGGGCTCAAGTTCAAGTGGATGAGGATGAAGAGATTCTA
ATGGACAAGGGTATAATTGATTCAGCATCTATAGTAAGCAAAAGACCTACTGGGAATACGCTCATCACAGAGACTCTGCCATGGAAAAAACATTTGAATATGGCTTTGAG
GAACTTCCTCAGCCATTCCCTTAATTCCCCTCAAGCTTATTTGACCCGTGGTGCCCTTCCCCATCTCCAAGCGGGAACGATGATGATGCTGATGCTTATCAAGAAAATTG
ATGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCAGTTGAAGGAGCAAGCTGGAAAATGTCAAGGAACTCCATCCGAATTTTGTTGGCAGCTTACCTAAAGCCCGAAGCAAATGTATGGCATACCTTTGCAAGGAG
TAGGTTGCTCCCTACCACTCATGACACCACTATGTCTAAAGAAAGAGTTCTCTTAGTTTTTTCCATCTTTAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGG
AGATTTTGGCGTGTGGAAAAAGGAAGGTAGGAAGGCTATTTTTCCCAAATCTTATTACAACATTGTGTTTGAGGGCTCAAGTTCAAGTGGATGAGGATGAAGAGATTCTA
ATGGACAAGGGTATAATTGATTCAGCATCTATAGTAAGCAAAAGACCTACTGGGAATACGCTCATCACAGAGACTCTGCCATGGAAAAAACATTTGAATATGGCTTTGAG
GAACTTCCTCAGCCATTCCCTTAATTCCCCTCAAGCTTATTTGACCCGTGGTGCCCTTCCCCATCTCCAAGCGGGAACGATGATGATGCTGATGCTTATCAAGAAAATTG
ATGAAGATTGA
Protein sequenceShow/hide protein sequence
MCAVEGASWKMSRNSIRILLAAYLKPEANVWHTFARSRLLPTTHDTTMSKERVLLVFSIFKILSIDVGRLLAKEILACGKRKVGRLFFPNLITTLCLRAQVQVDEDEEIL
MDKGIIDSASIVSKRPTGNTLITETLPWKKHLNMALRNFLSHSLNSPQAYLTRGALPHLQAGTMMMLMLIKKIDED