; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025871 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025871
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationchr10:22623333..22623856
RNA-Seq ExpressionLag0025871
SyntenyLag0025871
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON32444.1 hypothetical protein PanWU01x14_361130 [Parasponia andersonii]5.5e-0740.45Show/hide
Query:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA
        F+   I    W Q+CA P      LVREFYA+L D EE  V VRGM V WS EAIN ++ L D P    +E +   +  +L   +  +A
Subjt:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.5e-0739.62Show/hide
Query:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA
        E+GF  D S       F+   I    W Q+CA P      LVREFYANL D  E  V VRG+ V WS EAIN +F L D P    +E +   +   L   
Subjt:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA

Query:  VREVAL
        +  VA+
Subjt:  VREVAL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.5e-0840.95Show/hide
Query:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA
        E+GF  D S       F+   I    W Q+CA P      LVREFYANL D EE  V VRG+ V WS EAIN +F L D P    +E +   +   L   
Subjt:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA

Query:  VREVA
        +  VA
Subjt:  VREVA

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]1.5e-0742.7Show/hide
Query:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA
        F+   I    W Q+CA P      LVREFYANL D EE  V VRG+ V W+ EAIN +F L D P    +E V   +  +L   +  VA
Subjt:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA

XP_017625033.1 PREDICTED: E3 ubiquitin-protein ligase COP1-like [Gossypium arboreum]7.2e-0734.95Show/hide
Query:  LFERGFGDDLSRFLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREV
        L E  + D +SR +R   E L W  +C K  SV+  LVREFYANL   E  +V V G+ V  +  AIN+ F L DF +  ++ ++     + L     + 
Subjt:  LFERGFGDDLSRFLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREV

Query:  ALT
         +T
Subjt:  ALT

TrEMBL top hitse value%identityAlignment
A0A2P5A7C9 Uncharacterized protein2.7e-0740.45Show/hide
Query:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA
        F+   I    W Q+CA P      LVREFYA+L D EE  V VRGM V WS EAIN ++ L D P    +E +   +  +L   +  +A
Subjt:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA

A0A2P5AGA5 Uncharacterized protein (Fragment)2.7e-0739.62Show/hide
Query:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA
        E+GF  D S       F+   I    W Q+CA P      LVREFYANL D  E  V VRG+ V WS EAIN +F L D P    +E +   +   L   
Subjt:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA

Query:  VREVAL
        +  VA+
Subjt:  VREVAL

A0A2P5BCG4 Uncharacterized protein (Fragment)4.1e-0840.95Show/hide
Query:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA
        E+GF  D S       F+   I    W Q+CA P      LVREFYANL D EE  V VRG+ V WS EAIN +F L D P    +E +   +   L   
Subjt:  ERGFGDDLSR------FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAA

Query:  VREVA
        +  VA
Subjt:  VREVA

A0A2P5EK98 Uncharacterized protein (Fragment)7.0e-0842.7Show/hide
Query:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA
        F+   I    W Q+CA P      LVREFYANL D EE  V VRG+ V W+ EAIN +F L D P    +E V   +  +L   +  VA
Subjt:  FLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVA

A0A6P4NL39 E3 ubiquitin-protein ligase COP1-like3.5e-0734.95Show/hide
Query:  LFERGFGDDLSRFLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREV
        L E  + D +SR +R   E L W  +C K  SV+  LVREFYANL   E  +V V G+ V  +  AIN+ F L DF +  ++ ++     + L     + 
Subjt:  LFERGFGDDLSRFLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREV

Query:  ALT
         +T
Subjt:  ALT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAACGGGACTTCCTATTTGAACGAGGATTTGGCGATGATTTGTCACGGTTCTTGAGGACTGGAATAGAGAACCTTGGCTGGAGCCAATATTGTGCGAAACCAGC
GTCTGTTAATTCCAACCTTGTTCGAGAATTTTACGCAAATCTTGACGATAAGGAAGAATTTCAGGTTATAGTTCGAGGAATGCCCGTGGACTGGAGCCCAGAGGCCATTA
ATGATTTGTTCAATCTCCAGGATTTTCCGCATGCAGCATTTAATGAGATGGTGGTTGCACCATCTAGTGACCAGCTAAGTGCGGCTGTCCGAGAGGTTGCGCTTACTGCC
AACAACTCACGACTCCACAGTATCTTGGGACCAGGTACTCACCCTTCCCTGTGGATTCGACCCTGGAATACTCCAGGTATTACTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAACGGGACTTCCTATTTGAACGAGGATTTGGCGATGATTTGTCACGGTTCTTGAGGACTGGAATAGAGAACCTTGGCTGGAGCCAATATTGTGCGAAACCAGC
GTCTGTTAATTCCAACCTTGTTCGAGAATTTTACGCAAATCTTGACGATAAGGAAGAATTTCAGGTTATAGTTCGAGGAATGCCCGTGGACTGGAGCCCAGAGGCCATTA
ATGATTTGTTCAATCTCCAGGATTTTCCGCATGCAGCATTTAATGAGATGGTGGTTGCACCATCTAGTGACCAGCTAAGTGCGGCTGTCCGAGAGGTTGCGCTTACTGCC
AACAACTCACGACTCCACAGTATCTTGGGACCAGGTACTCACCCTTCCCTGTGGATTCGACCCTGGAATACTCCAGGTATTACTTGGTAG
Protein sequenceShow/hide protein sequence
MLKRDFLFERGFGDDLSRFLRTGIENLGWSQYCAKPASVNSNLVREFYANLDDKEEFQVIVRGMPVDWSPEAINDLFNLQDFPHAAFNEMVVAPSSDQLSAAVREVALTA
NNSRLHSILGPGTHPSLWIRPWNTPGITW