| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.4e-242 | 49.7 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M++SIV LL +EKL +NY+ WKSNLNTILVVDDLRFVL E+CP A A NA++ V +AYDRW KANDK RVYILAS+++VLAK+H+ + K IM+SL+E
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQPS+ L H+A+K++Y+ RMKEGTSVREHVLDMM+ FN+ E N IDE +QV+FIL+SLPKSF+ F++NA +NKI FN T+LLNELQ +++L +KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSLKKTQKKKGNKGKAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEK--EGKFDLLVLET
+ E EANV +KRKF + SSS K K Q KK KGKAP T+ K K ADKGKCFHCN DGHWKRNCPKYLAEK EK +GK+DLLV+ET
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSLKKTQKKKGNKGKAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEK--EGKFDLLVLET
Query: CLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA------------------------------------------------
CLVE D TWILDSGATNH+C FQE +S+++L +GE+TL+VGTGEV+SA+A
Subjt: CLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRSKLC
QNGVSERRNRTLLDMVRSMMS AQLP FWGYA+ETA+HILNNVPSKSV ETP+ELWKGRK SL +F IWGC AHVLV NPKKLE RSKLC
Subjt: ---------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRSKLC
Query: QFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKESPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIVLQPDRYL
FVGYPKE+RGG FY PQENKV VSTN TFLEEDH R+H+P +KI+L E K + D+ ST+V + N D S SQ LR+P+RSGR+V QP+RYL
Subjt: QFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKESPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIVLQPDRYL
Query: GLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEET
GL ETQI+I +D EDPL+Y QAMND D+D+W+KAMNLEMESM+ NSVW L DLP +VKPIGCKWIYKRKRD GKVQTFKARLVAKGYTQKEGVDYEET
Subjt: GLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEET
Query: FSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRRYAKFQNTAFSDW
FSPVAMLK IRILL IAT+Y+YEIWQMDVKT FLNGNLEE+I+M Q +GFIAQ QEQK V LQ ++ + ASR + +TA +
Subjt: FSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRRYAKFQNTAFSDW
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| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-238 | 49.85 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ KAKA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
|
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-238 | 49.85 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ KAKA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-238 | 49.85 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ KAKA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 2.4e-237 | 49.75 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ K KA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 4.0e-238 | 49.85 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ KAKA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
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| A0A5A7TWB9 Gag/pol protein | 4.0e-238 | 49.85 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ KAKA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
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| A0A5A7UGV2 Gag/pol protein | 4.0e-238 | 49.85 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ KAKA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
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| A0A5D3CPJ6 Gag/pol protein | 1.2e-237 | 49.75 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M+S+ +++L +KL NYA+WK+ +NT+L++DDLRFVL+E+CP A NA++ V + Y+RW KAN+K R YILASLSEVLAK+HE M+ +EIM+SLQE
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNV E N AVIDE SQV+FILESLP+SFLQFRSNA+MNKI + T+LLNELQ ++SL+K KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Q +GEANV S RKF + S+SGTKS+ +S KK +KKKG +G KA AAK+ K KA KG CFHCN +GHWKRNCPKYLAEK K K+GK+DLLVLE
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSL--KKTQKKKGNKG-KAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEKEGKFDLLVLE
Query: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
TCLVE+D+ WI+DSGATNHVCS FQ +S+RQL GEMT+RVGTG V+SA A
Subjt: TCLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
QNGVSERRNRTLLDMVRSMMS A LP+ FWGYAV+TA++ILN VPSKSVSETP +LW GRK SL HF IWGC AHVL NPKKLE RS
Subjt: ------------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRS
Query: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
KLC FVGYPK TRGGYFYDP++NKV VSTN TFLEEDH+R+HKP +KI+L E +KE S RVV+E TRV S + Q Q+LR P+RSGR+
Subjt: KLCQFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKE----SPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIV
Query: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
P RY+ LTET VI + EDPL++ +AM D DKDEW+KAMNLE+ESM+ NSVW+L D PD VKPIGCKWIYKRKR A GKVQTFKARLVAKGYTQ E
Subjt: LQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKE
Query: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
GVDYEETFSPVAMLK IRILL IA Y+DYEIWQMDVKT FLNGNLEE I+M Q +GFI GQEQK S+ L+ A R
Subjt: GVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALR
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| E2GK51 Gag/pol protein (Fragment) | 7.0e-243 | 49.7 | Show/hide |
Query: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
M++SIV LL +EKL +NY+ WKSNLNTILVVDDLRFVL E+CP A A NA++ V +AYDRW KANDK RVYILAS+++VLAK+H+ + K IM+SL+E
Subjt: MSSSIVSLLKNEKLTSENYATWKSNLNTILVVDDLRFVLMEDCPPALARNASQAVNDAYDRWTKANDKTRVYILASLSEVLAKRHEGMVIVKEIMNSLQE
Query: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
MFGQPS+ L H+A+K++Y+ RMKEGTSVREHVLDMM+ FN+ E N IDE +QV+FIL+SLPKSF+ F++NA +NKI FN T+LLNELQ +++L +KG
Subjt: MFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVVEANRAVIDELSQVAFILESLPKSFLQFRSNAMMNKIVFNPTSLLNELQLYKSLLKNKG
Query: QVEGEANVVHSKRKFEKSSSSGTKSVATSLKKTQKKKGNKGKAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEK--EGKFDLLVLET
+ E EANV +KRKF + SSS K K Q KK KGKAP T+ K K ADKGKCFHCN DGHWKRNCPKYLAEK EK +GK+DLLV+ET
Subjt: QVEGEANVVHSKRKFEKSSSSGTKSVATSLKKTQKKKGNKGKAPGTAAKSKGKAKAVADKGKCFHCNVDGHWKRNCPKYLAEKNKEK--EGKFDLLVLET
Query: CLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA------------------------------------------------
CLVE D TWILDSGATNH+C FQE +S+++L +GE+TL+VGTGEV+SA+A
Subjt: CLVEHDEFTWILDSGATNHVCSYFQENNSFRQLNDGEMTLRVGTGEVISAKA------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRSKLC
QNGVSERRNRTLLDMVRSMMS AQLP FWGYA+ETA+HILNNVPSKSV ETP+ELWKGRK SL +F IWGC AHVLV NPKKLE RSKLC
Subjt: ---------QNGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVSETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRSKLC
Query: QFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKESPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIVLQPDRYL
FVGYPKE+RGG FY PQENKV VSTN TFLEEDH R+H+P +KI+L E K + D+ ST+V + N D S SQ LR+P+RSGR+V QP+RYL
Subjt: QFVGYPKETRGGYFYDPQENKVIVSTNVTFLEEDHMRDHKPHNKIILGEATKESPRVVDEARPSTRVDEGTNSLDPSRQSQTLRMPQRSGRIVLQPDRYL
Query: GLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEET
GL ETQI+I +D EDPL+Y QAMND D+D+W+KAMNLEMESM+ NSVW L DLP +VKPIGCKWIYKRKRD GKVQTFKARLVAKGYTQKEGVDYEET
Subjt: GLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEET
Query: FSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRRYAKFQNTAFSDW
FSPVAMLK IRILL IAT+Y+YEIWQMDVKT FLNGNLEE+I+M Q +GFIAQ QEQK V LQ ++ + ASR + +TA +
Subjt: FSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRRYAKFQNTAFSDW
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.3e-40 | 27.48 | Show/hide |
Query: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSV---SETPFELWKGRKPSLCHFWIWGCLAHVLVTNPK-KLESRSKLCQFVGYP
NGVSER RT+ + R+M+S A+L FWG AV TA +++N +PS+++ S+TP+E+W +KP L H ++G +V + N + K + +S FVGY
Subjt: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSV---SETPFELWKGRKPSLCHFWIWGCLAHVLVTNPK-KLESRSKLCQFVGYP
Query: KETRGGYFYD-------------------------------------------PQENKVIVST----------NVTFLEEDHMRDHK----PHNKIILGE
E G +D P +++ I+ T N+ FL++ ++K KII E
Subjt: KETRGGYFYD-------------------------------------------PQENKVIVST----------NVTFLEEDHMRDHK----PHNKIILGE
Query: ATKESPR----------------VVDEARPSTRVD-----EGTNSLDPSRQSQTLR------------------MPQRSGRIVLQP-----DRYLGLTET
ES ++E++ R D +G+ + + SR+S+T + +RS R+ +P + L +
Subjt: ATKESPR----------------VVDEARPSTRVD-----EGTNSLDPSRQSQTLR------------------MPQRSGRIVLQP-----DRYLGLTET
Query: QIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVA
+ H + P S+ + +DK W +A+N E+ + N+ W + P+ + +W++ K + G +KARLVA+G+TQK +DYEETF+PVA
Subjt: QIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVA
Query: MLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDG
+ R +L + Y+ ++ QMDVKT FLNG L+E I+M G
Subjt: MLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-56 | 34.48 | Show/hide |
Query: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGC--LAHVLVTNPKKLESRSKLCQFVGYPK
NGV+ER NRT+++ VRSM+ A+LP FWG AV+TA +++N PS ++ E P +W ++ S H ++GC AHV KL+ +S C F+GY
Subjt: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGC--LAHVLVTNPKKLESRSKLCQFVGYPK
Query: ETRGGYFYDPQENKVIVSTNVTFLEEDHM----RDHKPHNKII-------------------LGEATKESPRVVDEARPSTRVDEGTNSLDPSRQSQTLR
E G +DP + KVI S +V F E + K N II E +++ + + ++DEG ++ Q +
Subjt: ETRGGYFYDPQENKVIVSTNVTFLEEDHM----RDHKPHNKII-------------------LGEATKESPRVVDEARPSTRVDEGTNSLDPSRQSQTLR
Query: MP-QRSGRIVLQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKAR
P +RS R ++ RY T+ V+ +D +P S + ++ +K++ +KAM EMES+ N ++L +LP +P+ CKW++K K+D K+ +KAR
Subjt: MP-QRSGRIVLQPDRYLGLTETQIVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKAR
Query: LVAKGYTQKEGVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRR-
LV KG+ QK+G+D++E FSPV + IR +L +A D E+ Q+DVKT FL+G+LEE I+M Q +GF G++ V L +L + A R+
Subjt: LVAKGYTQKEGVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRR-
Query: YAKFQN
Y KF +
Subjt: YAKFQN
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 5.9e-13 | 36.04 | Show/hide |
Query: IVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVAM
+ I + ++P S A+ D W +AM E++++ N W L P +GCKW++K K + G + KARLVAKG+ Q+EG+ + ET+SPV
Subjt: IVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVAM
Query: LKFIRILLFIA
IR +L +A
Subjt: LKFIRILLFIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.6e-29 | 23.82 | Show/hide |
Query: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGCLAHVLVT--NPKKLESRSKLCQFVGYPK
NG+SER++R +++ +++S A +P +W YA A++++N +P+ + E+PF+ G P+ ++GC + + N KL+ +S+ C F+GY
Subjt: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGCLAHVLVT--NPKKLESRSKLCQFVGYPK
Query: ETRGGYFYDPQENKVIVSTNVTFLE---------------EDHMRDH----KPHNKIILGEATKESPRVVD-----------------------------
Q +++ +S +V F E ++ R+ PH + +P D
Subjt: ETRGGYFYDPQENKVIVSTNVTFLE---------------EDHMRDH----KPHNKIILGEATKESPRVVD-----------------------------
Query: -------------------------EARPSTRVDEGTNSLDPSRQS-----QTLRMPQRSGRIVLQPDRYLGLTET----------------QIVIHND-
+ + T + T+ +P+ +S Q+L P +S P + T QIV +N+
Subjt: -------------------------EARPSTRVDEGTNSLDPSRQS-----QTLRMPQRSGRIVLQPDRYLGLTET----------------QIVIHND-
Query: ------------------------------VFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELA-DLPDEVKPIGCKWIYKRKRDATGKVQTFK
+P + QA+ DE W AM E+ + N W+L P V +GC+WI+ +K ++ G + +K
Subjt: ------------------------------VFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELA-DLPDEVKPIGCKWIYKRKRDATGKVQTFK
Query: ARLVAKGYTQKEGVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASR
ARLVAKGY Q+ G+DY ETFSPV IRI+L +A + I Q+DV FL G L ++++MSQ GFI +D V L+ AL + A R
Subjt: ARLVAKGYTQKEGVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASR
Query: R-YAKFQN
Y + +N
Subjt: R-YAKFQN
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.8e-28 | 24.47 | Show/hide |
Query: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGCLAHVLVT--NPKKLESRSKLCQFVGYPK
NG+SER++R +++M +++S A +P +W YA A++++N +P+ + ++PF+ G+ P+ ++GC + + N KLE +SK C F+GY
Subjt: NGVSERRNRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGCLAHVLVT--NPKKLESRSKLCQFVGYPK
Query: ETRGGYFYDPQENKVIVSTNVTFLE---------------EDHMRDHKP----HNKI-----------ILGEATKESPRVVDEARP--STRVDEGT----
++ S +V F E ++ D P H + LG SPR P +T+V
Subjt: ETRGGYFYDPQENKVIVSTNVTFLE---------------EDHMRDHKP----HNKI-----------ILGEATKESPRVVDEARP--STRVDEGT----
Query: ------------------------------------------NSLDPSRQSQTLRMPQRSGRIVLQPDRYLGLTETQIVIHNDVFEDPL-----------
NS P+ +Q +PQ P ++E + PL
Subjt: ------------------------------------------NSLDPSRQSQTLRMPQRSGRIVLQPDRYLGLTETQIVIHNDVFEDPL-----------
Query: ---------------------------SYG-------------QAMNDEDKDEWVKAMNLEMESMHSNSVWELA-DLPDEVKPIGCKWIYKRKRDATGKV
SY QAM D D W +AM E+ + N W+L P V +GC+WI+ +K ++ G +
Subjt: ---------------------------SYG-------------QAMNDEDKDEWVKAMNLEMESMHSNSVWELA-DLPDEVKPIGCKWIYKRKRDATGKV
Query: QTFKARLVAKGYTQKEGVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFI
+KARLVAKGY Q+ G+DY ETFSPV IRI+L +A + I Q+DV FL G L + ++MSQ GF+
Subjt: QTFKARLVAKGYTQKEGVDYEETFSPVAMLKFIRILLFIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.1e-29 | 35.61 | Show/hide |
Query: EDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKFIRILL
++P +Y +A ++ W AM+ E+ +M + WE+ LP KPIGCKW+YK K ++ G ++ +KARLVAKGYTQ+EG+D+ ETFSPV L ++++L
Subjt: EDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKFIRILL
Query: FIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRR-YAKFQNT----AFSDWTTSNSFLIN-----F
I+ Y++ + Q+D+ FLNG+L+E I+M G+ A+ + +A V L+ ++ + ASR+ + KF T F + +++ + F
Subjt: FIATYYDYEIWQMDVKTTFLNGNLEENIFMSQQDGFIAQGQEQKRRDAIGSVTTLQAALRRSRAASRR-YAKFQNT----AFSDWTTSNSFLIN-----F
Query: LCILL
LC+L+
Subjt: LCILL
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 5.8e-08 | 35.37 | Show/hide |
Query: NRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRSK
NRT+++ VRSM+ LP F A TA+HI+N PS +++ P E+W P+ + +GC+A++ + KL+ R+K
Subjt: NRTLLDMVRSMMSSAQLPSLFWGYAVETALHILNNVPSKSVS-ETPFELWKGRKPSLCHFWIWGCLAHVLVTNPKKLESRSK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 4.2e-14 | 36.04 | Show/hide |
Query: IVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVAM
+ I + ++P S A+ D W +AM E++++ N W L P +GCKW++K K + G + KARLVAKG+ Q+EG+ + ET+SPV
Subjt: IVIHNDVFEDPLSYGQAMNDEDKDEWVKAMNLEMESMHSNSVWELADLPDEVKPIGCKWIYKRKRDATGKVQTFKARLVAKGYTQKEGVDYEETFSPVAM
Query: LKFIRILLFIA
IR +L +A
Subjt: LKFIRILLFIA
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