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Lag0025960 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025960
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:25458206..25459328
RNA-Seq ExpressionLag0025960
SyntenyLag0025960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.4e-0938.61Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVV--------------------SNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ
        MK +V PK K+P  K+Y+G  DP+ HLD Y  W D + +                         R+SISSFKELA+AF++QF G   + +P   LLT+KQ
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVV--------------------SNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ

Query:  Q
        +
Subjt:  Q

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.3e-1044.12Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK
        MK +V PK K+PT KQ++G  D V HLD YR WMD +  VS A+                     R SISSFK LA+AF++QF+G R + +P   LLT+K
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK

Query:  QQ
        Q+
Subjt:  QQ

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]4.5e-1140.59Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDV--------------------VSNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ
        MK +  PK K+P   +Y+G  DP+ HLD YR W D +D+                         R SISSFKELA+AF++QF+G R + KP   LLT+KQ
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDV--------------------VSNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ

Query:  Q
        +
Subjt:  Q

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.8e-1043.14Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK
        M+ +V PK K+PT KQ++   DPV HLD YR WMD +  VS A+                     R SISSFK LA+AF++QF+G R + +P   LLT+K
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK

Query:  QQ
        Q+
Subjt:  QQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.5e-0338.81Show/hide
Query:  RLTKDGQDKEEPPRDIRTIFGGPVGGGSSRKRKVIARETRFELEYQGMYSVHLAKAHPPLEFTEAEA
        + T++G+  + P R+IRTI GGP+   S RKRK   RE R   E   +Y  +       +EF+E EA
Subjt:  RLTKDGQDKEEPPRDIRTIFGGPVGGGSSRKRKVIARETRFELEYQGMYSVHLAKAHPPLEFTEAEA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.5e-1043.14Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK
        M+ +V PK K+PT K ++G  +PV HLD YR WMD +  VS+AI                     R SISSFK LA+AF++QF+G R + +P   LLT+K
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK

Query:  QQ
        Q+
Subjt:  QQ

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166197.0e-1038.61Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVV--------------------SNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ
        MK +V PK K+P  K+Y+G  DP+ HLD Y  W D + +                         R+SISSFKELA+AF++QF G   + +P   LLT+KQ
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVV--------------------SNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ

Query:  Q
        +
Subjt:  Q

A0A6J1D7D2 uncharacterized protein LOC1110183076.3e-1144.12Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK
        MK +V PK K+PT KQ++G  D V HLD YR WMD +  VS A+                     R SISSFK LA+AF++QF+G R + +P   LLT+K
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK

Query:  QQ
        Q+
Subjt:  QQ

A0A6J1DWY0 uncharacterized protein LOC1110252931.8e-1043.14Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK
        M+ +V PK K+PT KQ++   DPV HLD YR WMD +  VS A+                     R SISSFK LA+AF++QF+G R + +P   LLT+K
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK

Query:  QQ
        Q+
Subjt:  QQ

A0A6J1DWY0 uncharacterized protein LOC1110252932.2e-0338.81Show/hide
Query:  RLTKDGQDKEEPPRDIRTIFGGPVGGGSSRKRKVIARETRFELEYQGMYSVHLAKAHPPLEFTEAEA
        + T++G+  + P R+IRTI GGP+   S RKRK   RE R   E   +Y  +       +EF+E EA
Subjt:  RLTKDGQDKEEPPRDIRTIFGGPVGGGSSRKRKVIARETRFELEYQGMYSVHLAKAHPPLEFTEAEA

A0A6J1DWY0 uncharacterized protein LOC1110252934.1e-1043.14Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK
        M+ +V PK K+PT K ++G  +PV HLD YR WMD +  VS+AI                     R SISSFK LA+AF++QF+G R + +P   LLT+K
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAI---------------------RRSISSFKELAQAFISQFMGAREQRKPHINLLTVK

Query:  QQ
        Q+
Subjt:  QQ

A0A6J1DZ49 uncharacterized protein LOC1110248512.2e-1140.59Show/hide
Query:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDV--------------------VSNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ
        MK +  PK K+P   +Y+G  DP+ HLD YR W D +D+                         R SISSFKELA+AF++QF+G R + KP   LLT+KQ
Subjt:  MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDV--------------------VSNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQ

Query:  Q
        +
Subjt:  Q

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGAGGTGCACCCGAAGTCCAAGGTACCCACATTCAAGCAGTATGAAGGTAAGAAAGACCCTGTGCAGCATCTAGATACCTACAGGACATGGATGGACTTCCA
TGACGTTGTTTCAAACGCAATCAGGAGGTCCATTAGTTCCTTCAAGGAACTAGCCCAAGCATTCATCTCACAGTTCATGGGAGCTAGAGAACAACGCAAGCCTCACATTA
ATCTCCTAACTGTCAAGCAACAGCCAGAAGTACATGAGTGCAGAGGAGTTGTTGAAATCAAAGAGGTTGGAACGATAGCACAAAAGACATTCTTCGTTCGACCTGGACAT
GAAAAAGGACAAAAAAACAACGGACGGACGATGGTGGTCGAGGTTGAGCACATCCCTTTGCTAAAGGAGTTCGTTGTCGAAACCGGGGTTGAGGTCGAGGCCGACCAGAG
ATGGCCGAGAGTGAGGCTGACCAAGGATGGCCAAGACAAAGAAGAACCCCCACGAGATATCAGAACCATCTTTGGAGGACCAGTTGGGGGAGGTTCAAGTAGGAAAAGAA
AAGTTATTGCAAGGGAAACAAGGTTCGAACTAGAATACCAAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCCCCTTTGGAGTTCACTGAGGCAGAGGCAGCCATC
CATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGAGGTGCACCCGAAGTCCAAGGTACCCACATTCAAGCAGTATGAAGGTAAGAAAGACCCTGTGCAGCATCTAGATACCTACAGGACATGGATGGACTTCCA
TGACGTTGTTTCAAACGCAATCAGGAGGTCCATTAGTTCCTTCAAGGAACTAGCCCAAGCATTCATCTCACAGTTCATGGGAGCTAGAGAACAACGCAAGCCTCACATTA
ATCTCCTAACTGTCAAGCAACAGCCAGAAGTACATGAGTGCAGAGGAGTTGTTGAAATCAAAGAGGTTGGAACGATAGCACAAAAGACATTCTTCGTTCGACCTGGACAT
GAAAAAGGACAAAAAAACAACGGACGGACGATGGTGGTCGAGGTTGAGCACATCCCTTTGCTAAAGGAGTTCGTTGTCGAAACCGGGGTTGAGGTCGAGGCCGACCAGAG
ATGGCCGAGAGTGAGGCTGACCAAGGATGGCCAAGACAAAGAAGAACCCCCACGAGATATCAGAACCATCTTTGGAGGACCAGTTGGGGGAGGTTCAAGTAGGAAAAGAA
AAGTTATTGCAAGGGAAACAAGGTTCGAACTAGAATACCAAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCCCCTTTGGAGTTCACTGAGGCAGAGGCAGCCATC
CATTAG
Protein sequenceShow/hide protein sequence
MKAEVHPKSKVPTFKQYEGKKDPVQHLDTYRTWMDFHDVVSNAIRRSISSFKELAQAFISQFMGAREQRKPHINLLTVKQQPEVHECRGVVEIKEVGTIAQKTFFVRPGH
EKGQKNNGRTMVVEVEHIPLLKEFVVETGVEVEADQRWPRVRLTKDGQDKEEPPRDIRTIFGGPVGGGSSRKRKVIARETRFELEYQGMYSVHLAKAHPPLEFTEAEAAI
H