; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025961 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025961
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein .
Genome locationchr10:25558461..25558819
RNA-Seq ExpressionLag0025961
SyntenyLag0025961
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152888.1 uncharacterized protein LOC111020511 [Momordica charantia]1.8e-2789.77Show/hide
Query:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        +ASVALRSSCLRAICRI+TSSA RNVSVSSVLPS+RSSFV  RTSISP H LRLLRRELSSLRPVHSAIASACLVSELPAEA+ASVEG
Subjt:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

XP_022937479.1 uncharacterized protein LOC111443881 [Cucurbita moschata]6.1e-2888.64Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        MAASVALRSSCLRAI RI+T SA RNVSVSSVLPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEA+ASV+G
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

XP_022969556.1 uncharacterized protein LOC111468540 [Cucurbita maxima]3.0e-2786.36Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        MAASVALRSSCLRAI RI+T+S+ RNVSVSS LPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEA+ASV+G
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

XP_023912928.1 uncharacterized protein LOC112024538 [Quercus suber]9.5e-1363.33Show/hide
Query:  MAASVALRSSCLRAICR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        MAASVA RS+ +RA CR  ++ SSATR  S    LP   S+FV  R+  S  PLRLLRRELSSL+PVHSAIASACLVS+LP EA+ S EG
Subjt:  MAASVALRSSCLRAICR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

XP_030957939.1 uncharacterized protein LOC115979952 [Quercus lobata]9.5e-1363.33Show/hide
Query:  MAASVALRSSCLRAICR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        MAASVA RS+ +RA CR  ++ SSATR  S    LP   S+FV  R+  S  PLRLLRRELSSL+PVHSAIASACLVS+LP+EA+ S EG
Subjt:  MAASVALRSSCLRAICR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

TrEMBL top hitse value%identityAlignment
A0A2N9FKA7 Uncharacterized protein4.6e-1365.56Show/hide
Query:  MAASVALRSSCLRAICRITT--SSATRNVSVSSVLPSVRSSFVSPRTSI-SPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVE
        MAASVA RS  +RA+CR +T  SSATR  S    LPS  S+FV  R+ I SP PLRLLRRELSSL+PVHS IASACLVS+LP+EA+ S E
Subjt:  MAASVALRSSCLRAICRITT--SSATRNVSVSSVLPSVRSSFVSPRTSI-SPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVE

A0A6J1DG34 uncharacterized protein LOC1110205118.6e-2889.77Show/hide
Query:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        +ASVALRSSCLRAICRI+TSSA RNVSVSSVLPS+RSSFV  RTSISP H LRLLRRELSSLRPVHSAIASACLVSELPAEA+ASVEG
Subjt:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

A0A6J1FBA6 uncharacterized protein LOC1114438813.0e-2888.64Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        MAASVALRSSCLRAI RI+T SA RNVSVSSVLPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEA+ASV+G
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

A0A6J1HY48 uncharacterized protein LOC1114685401.5e-2786.36Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        MAASVALRSSCLRAI RI+T+S+ RNVSVSS LPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEA+ASV+G
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

A0A7N2KM76 Uncharacterized protein4.6e-1363.33Show/hide
Query:  MAASVALRSSCLRAICR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG
        MAASVA RS+ +RA CR  ++ SSATR  S    LP   S+FV  R+  S  PLRLLRRELSSL+PVHSAIASACLVS+LP+EA+ S EG
Subjt:  MAASVALRSSCLRAICR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27775.1 FUNCTIONS IN: molecular_function unknown2.0e-0544.94Show/hide
Query:  AASVALRSSC-LRAICRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATA
        A  +A RS+  +R+I R  T+   RN+  S   PSV   +F SPR    + I     RLLRRELS+ +P HS IA+ACLVS+LP++ T+
Subjt:  AASVALRSSC-LRAICRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATA

AT2G27775.2 FUNCTIONS IN: molecular_function unknown2.0e-0544.94Show/hide
Query:  AASVALRSSC-LRAICRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATA
        A  +A RS+  +R+I R  T+   RN+  S   PSV   +F SPR    + I     RLLRRELS+ +P HS IA+ACLVS+LP++ T+
Subjt:  AASVALRSSC-LRAICRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTCAGTTGCACTCAGATCCTCGTGTCTGCGAGCAATTTGTAGAATAACCACCAGTTCCGCCACTAGAAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTGCG
TTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTAAGGCTCTTGCGACGAGAATTGAGCTCTCTTCGACCTGTTCATAGCGCAATTGCCTCCGCCTGCC
TTGTTTCTGAGCTGCCCGCCGAAGCCACCGCCTCCGTAGAAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTTCAGTTGCACTCAGATCCTCGTGTCTGCGAGCAATTTGTAGAATAACCACCAGTTCCGCCACTAGAAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTGCG
TTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTAAGGCTCTTGCGACGAGAATTGAGCTCTCTTCGACCTGTTCATAGCGCAATTGCCTCCGCCTGCC
TTGTTTCTGAGCTGCCCGCCGAAGCCACCGCCTCCGTAGAAGGTTAG
Protein sequenceShow/hide protein sequence
MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEATASVEG