; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025970 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025970
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetroelement pol polyprotein-like
Genome locationchr10:25753349..25754317
RNA-Seq ExpressionLag0025970
SyntenyLag0025970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030478190.1 uncharacterized protein LOC115695250 [Cannabis sativa]2.1e-4641.74Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWS-NVRGSSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        ++DASA G +L+KS+NEA+EILERI++ + QWS N   +S+KV  V+EVD ++ +   +A++ N LKN+ +  +VQ    ++ +         S VYC +
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWS-NVRGSSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMAR
         H +E CP+NPASV +VG                  W++HPNF+WGGQ ++S   QAQ K      F++ Q  PQQ  Q  PQ +  +SLE++M+DYMA+
Subjt:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMAR

Query:  NDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE------MKEPSKPQEVDMSSDRVDIVEKKLETGQGAGG
        ND IIQSQ ASLR LE Q+GQLAN+LK RL G +PSD ++  R+GK+   A+TLRS+K LE        KEPS  Q+           E K +    A  
Subjt:  NDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE------MKEPSKPQEVDMSSDRVDIVEKKLETGQGAGG

Query:  SNNDAGASGSVPDVEPPYVLAPPYDPPLPFPQR
           D  ASG     E P        PP PFPQR
Subjt:  SNNDAGASGSVPDVEPPYVLAPPYDPPLPFPQR

XP_030497851.1 uncharacterized protein LOC115713509 [Cannabis sativa]2.7e-4646.56Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        ++DASA GA+L+KS+NEA+EILERI++ + QWS  R  +S+KV  V+EVD ++ +   +A++ N LKN+ +  +VQ  PVV       Q A  SCVYCG+
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMAR
         H +E CP+NPASV +VG                  W++HPNF WGG  ++S   QAQ K      F++ Q  PQQ  Q  PQ +  +SLES+M+DYMA+
Subjt:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMAR

Query:  NDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE
        ++ +IQSQ A LR LE Q+GQLAN+LK R  G +PSD E+  R GK+  +A+TLRS K LE+
Subjt:  NDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]2.4e-4745.13Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        ++DASA GA+ +KS+NEA+EI+ERI++ + QWS  R  +S+KV  V+EVD ++ +   +A++ N LKN+ +  +VQ    +       Q A  SCVYCG+
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMAR
         H +E CP+NPASV +VG                  W++HPNF+WGGQ ++S   Q Q K      F++ Q  PQQ+ Q  PQ +  +SLES+M+DYMA+
Subjt:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMAR

Query:  NDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE------MKEPSKPQE
        ND +IQSQ ASLR LE Q+GQLAN LK R  G +PSD E+  R+GK+   A+TLRS K LE        KEPS  Q+
Subjt:  NDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE------MKEPSKPQE

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]1.6e-4645.86Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        ++DASA GA+L+KS+NEA+EILERI++ + QWS  R  +S+KV  V+EVD ++ +   +A++ N LKN+ +  +VQ    +       Q A  SCVYCG+
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQ-ESNSKVPQAQQKVVNQFRFAKSQAFP----QQNKQALPQQNSGNSLESMMK
         H +E CP+N ASV +VG                  W++HPNF+WGGQ  S+S   QAQ K          Q+FP    QQ +   PQ +  +SLES+M+
Subjt:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQ-ESNSKVPQAQQKVVNQFRFAKSQAFP----QQNKQALPQQNSGNSLESMMK

Query:  DYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLE
        DYMA+ND +IQSQ ASLR LE Q+GQLAN+LK R  G +PSD E+  R+GK+   A+TLRS K LE
Subjt:  DYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLE

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.9e-4746.04Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        ++DASA GA+L+KS+NEA+EILERI++ + QWS  R  +S+KV  V+EVD ++ +   +A++ N LKN+ +  +VQ    +       Q A  SCVYCG+
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRG-SSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQ-ESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMA
         H +E CP+NPASV +VG                  W++HPNF+WGGQ  S+S   QAQ K      F++ Q  PQQ  Q  PQ +  +SLES+M+DYMA
Subjt:  EHNYEFCPNNPASVFFVG------------------WRNHPNFAWGGQ-ESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMA

Query:  RNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE------MKEPSKPQE
        +ND +IQSQ ASLR LE Q+GQLAN+LK R  G +PSD E+  R+GK+   A+TLRS K +E        KEPS  Q+
Subjt:  RNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEE------MKEPSKPQE

TrEMBL top hitse value%identityAlignment
A0A5B6VWJ0 Retroelement pol polyprotein-like3.1e-4041.89Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGSS-KKVKSVIEVDGVSTIRDDIATLANTLKNITV---VSNVQQPPVVESIAFVNQVAAESCVY
        +VDASA GALL+KS+NEAYEI+ERI++ + QW   R +S ++V  + EVD ++++   ++++++  KN+T     S   QPP        NQ    + VY
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGSS-KKVKSVIEVDGVSTIRDDIATLANTLKNITV---VSNVQQPPVVESIAFVNQVAAESCVY

Query:  CGEEHNYEFCPNNPASVFFVG-------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKD
        CGE H  E CP+NP SV+++G                   WRNH +F+W  Q + +        V  Q R  +   FPQQ  Q L Q  + NSLES++K 
Subjt:  CGEEHNYEFCPNNPASVFFVG-------------------WRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKD

Query:  YMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLE
        YMA+ND +IQSQ A+L+ LE QVGQLA EL+ RL G +PSD E+    GK+   A+TLRS+K +E
Subjt:  YMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLE

A0A6J1DYG0 uncharacterized protein LOC1110257647.0e-3236.12Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGSSKKVK----SVIEVDGVSTIRDDIATLANTLKNITV-VSNVQQPPV--VES----IAFVNQV
        M++ +A GA   K+FNE  +IL  +++++  W + R  +   K     V+ +D  S+++ +  T+   LK + + + N    P+  V+S     A V QV
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGSSKKVK----SVIEVDGVSTIRDDIATLANTLKNITV-VSNVQQPPV--VES----IAFVNQV

Query:  AAESCVYCGEEHNYEFCPNNPASVFFV-----------------GWRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAF---PQ----QNKQALPQQ
            C +C E H Y+ CP+NPASVF+V                 GWR+HPNF+W GQ  +    Q Q +   Q     +Q +   PQ    Q  Q  P Q
Subjt:  AAESCVYCGEEHNYEFCPNNPASVFFV-----------------GWRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAF---PQ----QNKQALPQQ

Query:  NSGNSLESMMKDYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEEMKEPSKPQEVDMSSDRVDIVE
        N+ ++LE+MMK+YMAR D +IQSQ AS+R  E Q+GQLANELK R  G+ P   E   REGK+Q  A+TLRS    +E   P+   ++  +   V I E
Subjt:  NSGNSLESMMKDYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEEMKEPSKPQEVDMSSDRVDIVE

A0A6J1EEI2 uncharacterized protein LOC1114333944.3e-4244.25Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        +VDASA GA+L+K++NEAYEILERI++ +CQW++VR +  +K + V+EVD +S+I   +A++ N L+N+ +  +      V ++A +NQ AAESCVYCGE
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFV--------------------GWRNHPNFAWGGQES-NSKVPQAQQ-----KVVNQFRFAKSQAFPQQNKQALPQQNSGNSLES
        EH ++ CP+NPAS+F+V                    GWRNHPNF+W GQ S N ++P          + NQ  ++  Q   Q       Q   G S+ES
Subjt:  EHNYEFCPNNPASVFFV--------------------GWRNHPNFAWGGQES-NSKVPQAQQ-----KVVNQFRFAKSQAFPQQNKQALPQQNSGNSLES

Query:  MMKDYMARNDVIIQSQQASLRVLEFQ
        ++K+YMA+NDV+IQ+QQASLR LE Q
Subjt:  MMKDYMARNDVIIQSQQASLRVLEFQ

A0A6J1EQ90 uncharacterized protein LOC1114364111.0e-4339.93Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        +VDASA GA+L+K++NEAYEILERI++ +CQW++VR +  +K + V+EVD +S+I   +A++ N L+N+ +  +      V + A +NQ AAESCVYCGE
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFV--------------------GWRNHPNFAWGGQE-SNSKVPQAQQ-----KVVNQFRFAKSQAFPQQNKQALPQQNSGNSLES
        EH ++ CP+NPAS+F+V                    GWRNHPNF+W GQ   N ++P         ++ NQ  ++  Q   Q       Q  S  S+ES
Subjt:  EHNYEFCPNNPASVFFV--------------------GWRNHPNFAWGGQE-SNSKVPQAQQ-----KVVNQFRFAKSQAFPQQNKQALPQQNSGNSLES

Query:  MMKDYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEEMKEPSKPQ
        ++K+YMA+ND +IQSQQASLR LE Q+G   N  +   H    +D + R  E      A+     K   E++E  K Q
Subjt:  MMKDYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREGKKQVHAMTLRSDKPLEEMKEPSKPQ

A0A6J1G7Q6 uncharacterized protein LOC1114515981.6e-4444.27Show/hide
Query:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE
        +VDASA G +L+K++NEAYEILERI++ +CQW +VR +  KK + V+EVD +S+I   +A++ N L+N+             +   + Q A ESCVYCGE
Subjt:  MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGS-SKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGE

Query:  EHNYEFCPNNPASVFFV--------------------GWRNHPNFAWGGQES-NSKVPQAQQ-----KVVNQFRFAKSQAFPQQNKQALPQQNSGNSLES
        +H ++ CP+NPAS+F+V                    GWRNHPNF   GQ S N ++P          + NQ  +   QA  Q    +  Q  SG  LES
Subjt:  EHNYEFCPNNPASVFFV--------------------GWRNHPNFAWGGQES-NSKVPQAQQ-----KVVNQFRFAKSQAFPQQNKQALPQQNSGNSLES

Query:  MMKDYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREG
        ++K+YMARND +IQSQQ SLR LE QVGQLANEL+ R  G +P+D E   REG
Subjt:  MMKDYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIEHRIREG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCTTCTGCGGAAGGGGCTCTTTTGGCAAAATCTTTTAATGAAGCTTATGAGATTTTAGAGAGAATATCAACCTACAGTTGTCAATGGTCAAACGTTAGAGG
CTCTAGTAAGAAAGTTAAGAGTGTGATAGAAGTGGATGGTGTGTCTACCATTAGGGACGATATTGCAACATTAGCTAACACTCTTAAAAACATAACTGTGGTAAGTAATG
TTCAGCAACCACCAGTGGTGGAATCTATTGCATTTGTGAATCAAGTGGCAGCTGAATCTTGTGTCTATTGTGGTGAAGAGCATAATTATGAGTTTTGTCCTAACAATCCA
GCTTCTGTGTTTTTTGTAGGTTGGCGCAACCACCCAAACTTTGCGTGGGGAGGGCAAGAGAGCAATTCAAAAGTCCCCCAAGCACAGCAAAAGGTGGTGAACCAGTTCAG
ATTTGCTAAATCACAGGCATTTCCCCAGCAAAATAAGCAGGCTTTGCCCCAGCAAAATTCAGGTAATTCTCTGGAGTCAATGATGAAGGATTATATGGCTCGTAATGATG
TCATAATCCAAAGTCAGCAGGCTTCTTTGAGAGTCCTAGAGTTTCAGGTGGGCCAGCTAGCTAATGAGCTGAAGGCACGACTTCACGGGAACATTCCTTCAGATATTGAA
CACCGTATAAGGGAAGGTAAGAAGCAGGTGCATGCAATGACTTTAAGGAGTGATAAGCCACTAGAAGAGATGAAAGAGCCTAGTAAACCCCAAGAAGTAGATATGAGTAG
TGATAGAGTTGATATTGTTGAAAAAAAATTGGAAACTGGTCAGGGTGCTGGAGGCAGCAATAATGATGCTGGAGCATCTGGTTCTGTTCCAGATGTGGAACCACCTTATG
TACTGGCCCCACCCTATGACCCACCCTTACCTTTTCCACAAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCTTCTGCGGAAGGGGCTCTTTTGGCAAAATCTTTTAATGAAGCTTATGAGATTTTAGAGAGAATATCAACCTACAGTTGTCAATGGTCAAACGTTAGAGG
CTCTAGTAAGAAAGTTAAGAGTGTGATAGAAGTGGATGGTGTGTCTACCATTAGGGACGATATTGCAACATTAGCTAACACTCTTAAAAACATAACTGTGGTAAGTAATG
TTCAGCAACCACCAGTGGTGGAATCTATTGCATTTGTGAATCAAGTGGCAGCTGAATCTTGTGTCTATTGTGGTGAAGAGCATAATTATGAGTTTTGTCCTAACAATCCA
GCTTCTGTGTTTTTTGTAGGTTGGCGCAACCACCCAAACTTTGCGTGGGGAGGGCAAGAGAGCAATTCAAAAGTCCCCCAAGCACAGCAAAAGGTGGTGAACCAGTTCAG
ATTTGCTAAATCACAGGCATTTCCCCAGCAAAATAAGCAGGCTTTGCCCCAGCAAAATTCAGGTAATTCTCTGGAGTCAATGATGAAGGATTATATGGCTCGTAATGATG
TCATAATCCAAAGTCAGCAGGCTTCTTTGAGAGTCCTAGAGTTTCAGGTGGGCCAGCTAGCTAATGAGCTGAAGGCACGACTTCACGGGAACATTCCTTCAGATATTGAA
CACCGTATAAGGGAAGGTAAGAAGCAGGTGCATGCAATGACTTTAAGGAGTGATAAGCCACTAGAAGAGATGAAAGAGCCTAGTAAACCCCAAGAAGTAGATATGAGTAG
TGATAGAGTTGATATTGTTGAAAAAAAATTGGAAACTGGTCAGGGTGCTGGAGGCAGCAATAATGATGCTGGAGCATCTGGTTCTGTTCCAGATGTGGAACCACCTTATG
TACTGGCCCCACCCTATGACCCACCCTTACCTTTTCCACAAAGGTAG
Protein sequenceShow/hide protein sequence
MVDASAEGALLAKSFNEAYEILERISTYSCQWSNVRGSSKKVKSVIEVDGVSTIRDDIATLANTLKNITVVSNVQQPPVVESIAFVNQVAAESCVYCGEEHNYEFCPNNP
ASVFFVGWRNHPNFAWGGQESNSKVPQAQQKVVNQFRFAKSQAFPQQNKQALPQQNSGNSLESMMKDYMARNDVIIQSQQASLRVLEFQVGQLANELKARLHGNIPSDIE
HRIREGKKQVHAMTLRSDKPLEEMKEPSKPQEVDMSSDRVDIVEKKLETGQGAGGSNNDAGASGSVPDVEPPYVLAPPYDPPLPFPQR