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Lag0025989 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025989
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc CCHC-type-like protein
Genome locationchr10:26307367..26307938
RNA-Seq ExpressionLag0025989
SyntenyLag0025989
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU30026.1 hypothetical protein TSUD_161120 [Trifolium subterraneum]6.5e-0626.99Show/hide
Query:  WDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDFDEYG
        W L+  V+ ++ G N YL +F   RD   V + GPW +                                           + LS V+G FE  D  +  
Subjt:  WDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDFDEYG

Query:  KMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEG
        +M G  LR KV I++ +PLKRGT ++      K +   + R P    L  +IG   +DC+E G
Subjt:  KMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEG

PNY15110.1 cysteine desulfurase mitochondrial-like [Trifolium pratense]6.5e-0627.22Show/hide
Query:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDF
        M + W L+  V+V+    N +L +F   +D   V + GPW +                                           + L ++IG FE TD 
Subjt:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDF

Query:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEGEI
         E  +  G  LR+KV I++ +PLKRGT IK +    K +   + R P F  +  +IG   ++CEE GE+
Subjt:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEGEI

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]2.9e-0625Show/hide
Query:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDF
        + ++W     VK++  G N ++ KF    DK RV  GGPW +                                          ++ L  +IGA E  + 
Subjt:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDF

Query:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEE-EGE--------------II---ARKNFSKW
        DE G+  GE  R++V INI  PLK+  ++K     + +   ++ R P F      IG  +++C + +G+              II   ARKN +KW
Subjt:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEE-EGE--------------II---ARKNFSKW

XP_024036844.1 uncharacterized protein LOC112096879 [Citrus clementina]3.8e-0623.46Show/hide
Query:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPW------------------------------------------KYVEALSSVIGAFETTDF
        + ++W     VK+   G N ++ KF +  DK RV  GGPW                                           +++ L  +IG  E  + 
Subjt:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPW------------------------------------------KYVEALSSVIGAFETTDF

Query:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEE-EGEIIARKNFSKW
        DE G   GE  R+++ INI +PLK+  ++K     +     ++ R P F      IG  F++C + +G+     +F  W
Subjt:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEE-EGEIIARKNFSKW

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]3.1e-0829.73Show/hide
Query:  MMPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY----------------VEALSSVIGAFETTDFDEYGKMEGETLRVKVKINIDEPLKR
        MM ++W     V  K  G+N +L +F+  RDK R+   GPW +                   + + IG  E  D ++     GE LR++V++NI +PL R
Subjt:  MMPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY----------------VEALSSVIGAFETTDFDEYGKMEGETLRVKVKINIDEPLKR

Query:  GTYIKTRSMVEKKWIPL-HMRNPGFLLLLWQIGTCFQDCEEEGEIIAR
        G  +K        WI   + R P F  +  ++G   +DCE  G   AR
Subjt:  GTYIKTRSMVEKKWIPL-HMRNPGFLLLLWQIGTCFQDCEEEGEIIAR

TrEMBL top hitse value%identityAlignment
A0A2K3PII7 Cysteine desulfurase mitochondrial-like3.1e-0627.22Show/hide
Query:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDF
        M + W L+  V+V+    N +L +F   +D   V + GPW +                                           + L ++IG FE TD 
Subjt:  MPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDF

Query:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEGEI
         E  +  G  LR+KV I++ +PLKRGT IK +    K +   + R P F  +  +IG   ++CEE GE+
Subjt:  DEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEGEI

A0A2Z6MBL0 Uncharacterized protein3.1e-0626.99Show/hide
Query:  WDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDFDEYG
        W L+  V+ ++ G N YL +F   RD   V + GPW +                                           + LS V+G FE  D  +  
Subjt:  WDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTDFDEYG

Query:  KMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEG
        +M G  LR KV I++ +PLKRGT ++      K +   + R P    L  +IG   +DC+E G
Subjt:  KMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEEEG

A0A392MFB2 Zinc CCHC-type-like protein7.0e-0625.9Show/hide
Query:  MMPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTD
        M+   W L+  V+ ++ G N YL +F   RD   V + GPW +                                             L  V+G FE  D
Subjt:  MMPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY------------------------------------------VEALSSVIGAFETTD

Query:  FDEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEE
          +  +M G  LR KV+I++ +PLKRGT ++      K +   + R P F  +  +IG   +DC+E
Subjt:  FDEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLLLLWQIGTCFQDCEE

A0A5C7GVA6 CCHC-type domain-containing protein7.0e-0631.91Show/hide
Query:  RIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKYVE-------------ALSSVIGAFETTDFDEYGKMEGETLRVKVKINIDEPLKR
        RIW +   + ++    N ++  F+   D+ RV  GGPW +                L S+IG  E  D   YG  +G+ +RV+V IN+D+PL+R
Subjt:  RIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKYVE-------------ALSSVIGAFETTDFDEYGKMEGETLRVKVKINIDEPLKR

A0A6P9EID8 uncharacterized protein LOC1183488561.5e-0829.73Show/hide
Query:  MMPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY----------------VEALSSVIGAFETTDFDEYGKMEGETLRVKVKINIDEPLKR
        MM ++W     V  K  G+N +L +F+  RDK R+   GPW +                   + + IG  E  D ++     GE LR++V++NI +PL R
Subjt:  MMPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKY----------------VEALSSVIGAFETTDFDEYGKMEGETLRVKVKINIDEPLKR

Query:  GTYIKTRSMVEKKWIPL-HMRNPGFLLLLWQIGTCFQDCEEEGEIIAR
        G  +K        WI   + R P F  +  ++G   +DCE  G   AR
Subjt:  GTYIKTRSMVEKKWIPL-HMRNPGFLLLLWQIGTCFQDCEEEGEIIAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCTAGAATATGGGATCTGGAGGGATTAGTTAAAGTCAAAAAGGCAGGAGCAAACGCATACTTGTGTAAATTCAAAAGGAGCAGAGATAAAGCAAGAGTTACCAG
AGGAGGACCGTGGAAATATGTTGAGGCGTTGAGCAGCGTCATTGGAGCTTTTGAAACAACCGATTTCGACGAATATGGGAAGATGGAAGGAGAGACTCTCAGAGTCAAAG
TAAAAATCAATATAGATGAGCCTCTCAAGCGAGGAACATACATCAAAACAAGGTCAATGGTGGAAAAGAAATGGATCCCATTACATATGAGAAATCCTGGATTTTTGCTA
TTACTGTGGCAAATTGGGACATGTTTTCAAGATTGTGAAGAAGAAGGGGAAATCATAGCAAGGAAAAACTTTTCGAAGTGGAACTCCGAGAAACAAAGGGAAGCAAAGGC
TATATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCCTAGAATATGGGATCTGGAGGGATTAGTTAAAGTCAAAAAGGCAGGAGCAAACGCATACTTGTGTAAATTCAAAAGGAGCAGAGATAAAGCAAGAGTTACCAG
AGGAGGACCGTGGAAATATGTTGAGGCGTTGAGCAGCGTCATTGGAGCTTTTGAAACAACCGATTTCGACGAATATGGGAAGATGGAAGGAGAGACTCTCAGAGTCAAAG
TAAAAATCAATATAGATGAGCCTCTCAAGCGAGGAACATACATCAAAACAAGGTCAATGGTGGAAAAGAAATGGATCCCATTACATATGAGAAATCCTGGATTTTTGCTA
TTACTGTGGCAAATTGGGACATGTTTTCAAGATTGTGAAGAAGAAGGGGAAATCATAGCAAGGAAAAACTTTTCGAAGTGGAACTCCGAGAAACAAAGGGAAGCAAAGGC
TATATAG
Protein sequenceShow/hide protein sequence
MMPRIWDLEGLVKVKKAGANAYLCKFKRSRDKARVTRGGPWKYVEALSSVIGAFETTDFDEYGKMEGETLRVKVKINIDEPLKRGTYIKTRSMVEKKWIPLHMRNPGFLL
LLWQIGTCFQDCEEEGEIIARKNFSKWNSEKQREAKAI