; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026001 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026001
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:26670456..26671285
RNA-Seq ExpressionLag0026001
SyntenyLag0026001
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]7.2e-2838.4Show/hide
Query:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRK------------------------PHINLLTVKQ
        MK ++P KFK+P  K YDG  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS +  F++  RK                        P   LLT+KQ
Subjt:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRK------------------------PHINLLTVKQ

Query:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSEREHKR----------HSSVDQDRK------KDKRPRTDDSGRGRA
        +  E L+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S  +      SE   +           HS  D   K      K KRP     G    
Subjt:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSEREHKR----------HSSVDQDRK------KDKRPRTDDSGRGRA

Query:  DHDHGRGR---AHPYGKFEKYMPTAVPQEQVLMEIQN
          D G+GR     P  KFEKY PT VP EQVLMEI++
Subjt:  DHDHGRGR---AHPYGKFEKYMPTAVPQEQVLMEIQN

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.6e-4141.95Show/hide
Query:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELR------------------------KPHINLLTVKQ
        M+ ++P KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+RCR F  TL GSA+  F +  R                        +P   LLT+KQ
Subjt:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELR------------------------KPHINLLTVKQ

Query:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSE--REHKRHSSV----------DQDRKKDKRPRTDDSGRG-RADHD
        +  E LRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S  +   +  SE     +R+ S           D  R   KR R+ D  +G R +  
Subjt:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSE--REHKRHSSV----------DQDRKKDKRPRTDDSGRG-RADHD

Query:  HGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
            +  P  KFEKY PT VP EQVLMEI++ RLLK P RMK+S+ +R K +YCLFHRDHGH+ ++C
Subjt:  HGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

XP_022159079.1 uncharacterized protein LOC111025521 [Momordica charantia]1.2e-2734.92Show/hide
Query:  KLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFER-ELRKPHINLLTVKQQPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLE
        K YDG KDP  ++  ++  MDF   +DAI+CRAF   LTGSA+  + R   RK   +L T++Q+ GE L++Y+ RF +E L+V   S+ + +     GL 
Subjt:  KLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFER-ELRKPHINLLTVKQQPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLE

Query:  DERLLNSI---------------------EELLKSKRSEREHKRHSSVDQDRK-KDK-------RPRTDDSGRGRADH---DHGRGRAHPYGKFEKYMPT
        DE L   +                     +ELL++K    E K    +DQ R  KDK       + +   S   +AD+   D  R R+ PY   E+Y PT
Subjt:  DERLLNSI---------------------EELLKSKRSEREHKRHSSVDQDRK-KDK-------RPRTDDSGRGRADH---DHGRGRAHPYGKFEKYMPT

Query:  AVPQEQVLMEIQNT---RLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
         +P  ++L  I+ T   +LLK P +++   ++R+K +YC FHRDHGH+  NC
Subjt:  AVPQEQVLMEIQNT---RLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

XP_022159160.1 uncharacterized protein LOC111025585 [Momordica charantia]1.5e-2835.19Show/hide
Query:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRKPHINLLTVKQQPGEILRDYIMRFNDEALQVEGYS
        ++  +P KFK+P  K YDG KDP  ++  ++S MDF   SDAI+CRAF   LTG+     E   RK   +L T++Q+ GE LR+Y+ RF +E L+V   S
Subjt:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRKPHINLLTVKQQPGEILRDYIMRFNDEALQVEGYS

Query:  EGATLVAITAGLEDERLLNSIEELLKSKRSEREHKRHSSVDQDRKKDKRPRTDDSGRGRADHDHGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNT---RL
        + + +      L DE L   + E   S  +E   K    +D                GR+D D  R      G +E Y PT +P  ++L  I+     +L
Subjt:  EGATLVAITAGLEDERLLNSIEELLKSKRSEREHKRHSSVDQDRKKDKRPRTDDSGRGRADHDHGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNT---RL

Query:  LKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
        LK P +++   ++R+K +YC FHRDHG+   NC
Subjt:  LKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]7.2e-2832.03Show/hide
Query:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFE------------------------RELRKPHINLLTVKQ
        M A+ P +F +P  + YDG++DP +HL  Y++ M+  G S AI CRAF  TL G+A+  F                         R+  KP   LLTVKQ
Subjt:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFE------------------------RELRKPHINLLTVKQ

Query:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSI---------------------EELLKSKRSEREHKRHSSVDQDRKKDKRPRTDDS
        Q GE LRDYI R+N+E  QV+GY +G  L  I  GL   +L  S+                     EE  K++  E+         +D ++++R    D 
Subjt:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSI---------------------EELLKSKRSEREHKRHSSVDQDRKKDKRPRTDDS

Query:  GRGRADHDHGR------GRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
           R     G        R     +F  +     P+EQ+LM+++N  L + P  MK++  RR+ ++YC FH+DHGH    C
Subjt:  GRGRADHDHGR------GRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

TrEMBL top hitse value%identityAlignment
A0A2N9F118 Ribonuclease H4.6e-2831.14Show/hide
Query:  MPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFER------------------------ELRKPHINLLTVKQQPGE
        +P KF++P+ +++DG KDP+ HL ++K+ M   GV D I CRAF  TL G A+  F++                           +P  +LL VKQ+ GE
Subjt:  MPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFER------------------------ELRKPHINLLTVKQQPGE

Query:  ILRDYIMRFNDEALQVEGYSEGATLVAITAGL----------------------EDERLLNSIEELLKSKRSEREHKRHSSVDQDRK-KDKRPRTDDSGR
         LR Y+ RFN E L V+G  +   L A  +GL                      E +R +N  E LL   ++  + ++    D+  +  + RP+   +  
Subjt:  ILRDYIMRFNDEALQVEGYSEGATLVAITAGL----------------------EDERLLNSIEELLKSKRSEREHKRHSSVDQDRK-KDKRPRTDDSGR

Query:  GRADHDHGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
        GR +   GRG      +F ++ P   P + + M+I+N   LK PG++ +  D+R + +YC FHRDHGH+ +NC
Subjt:  GRADHDHGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

A0A2N9F1B5 Ribonuclease H4.1e-2933.33Show/hide
Query:  MPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFER------------------------ELRKPHINLLTVKQQPGE
        +P KF++P+ +++DG KDP+ HL ++K+ M   GV D I CRAF  TL G A+  F++                           +P  +LL VKQ+ GE
Subjt:  MPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFER------------------------ELRKPHINLLTVKQQPGE

Query:  ILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSE-----REHKRHSSVDQDRKKDKRPRTDDSGRGRADHDHGRGRAHPYGKF
         LR Y+ RFN E L V+G  +   L A  +GL+ E  L SI +   S  +E     ++ K   +       + RP+   +  GR +   GRG      +F
Subjt:  ILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSE-----REHKRHSSVDQDRKKDKRPRTDDSGRGRADHDHGRGRAHPYGKF

Query:  EKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
         ++ P   P + + M+I+N   LK PG++ +  D+R + +YC FHRDHGH+ +NC
Subjt:  EKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

A0A6J1D3B7 uncharacterized protein LOC1110166193.5e-2838.4Show/hide
Query:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRK------------------------PHINLLTVKQ
        MK ++P KFK+P  K YDG  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS +  F++  RK                        P   LLT+KQ
Subjt:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRK------------------------PHINLLTVKQ

Query:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSEREHKR----------HSSVDQDRK------KDKRPRTDDSGRGRA
        +  E L+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S  +      SE   +           HS  D   K      K KRP     G    
Subjt:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSEREHKR----------HSSVDQDRK------KDKRPRTDDSGRGRA

Query:  DHDHGRGR---AHPYGKFEKYMPTAVPQEQVLMEIQN
          D G+GR     P  KFEKY PT VP EQVLMEI++
Subjt:  DHDHGRGR---AHPYGKFEKYMPTAVPQEQVLMEIQN

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-4141.95Show/hide
Query:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELR------------------------KPHINLLTVKQ
        M+ ++P KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+RCR F  TL GSA+  F +  R                        +P   LLT+KQ
Subjt:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELR------------------------KPHINLLTVKQ

Query:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSE--REHKRHSSV----------DQDRKKDKRPRTDDSGRG-RADHD
        +  E LRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S  +   +  SE     +R+ S           D  R   KR R+ D  +G R +  
Subjt:  QPGEILRDYIMRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIEELLKSKRSE--REHKRHSSV----------DQDRKKDKRPRTDDSGRG-RADHD

Query:  HGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
            +  P  KFEKY PT VP EQVLMEI++ RLLK P RMK+S+ +R K +YCLFHRDHGH+ ++C
Subjt:  HGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

A0A6J1DXW4 uncharacterized protein LOC1110255857.0e-2935.19Show/hide
Query:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRKPHINLLTVKQQPGEILRDYIMRFNDEALQVEGYS
        ++  +P KFK+P  K YDG KDP  ++  ++S MDF   SDAI+CRAF   LTG+     E   RK   +L T++Q+ GE LR+Y+ RF +E L+V   S
Subjt:  MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRKPHINLLTVKQQPGEILRDYIMRFNDEALQVEGYS

Query:  EGATLVAITAGLEDERLLNSIEELLKSKRSEREHKRHSSVDQDRKKDKRPRTDDSGRGRADHDHGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNT---RL
        + + +      L DE L   + E   S  +E   K    +D                GR+D D  R      G +E Y PT +P  ++L  I+     +L
Subjt:  EGATLVAITAGLEDERLLNSIEELLKSKRSEREHKRHSSVDQDRKKDKRPRTDDSGRGRADHDHGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNT---RL

Query:  LKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC
        LK P +++   ++R+K +YC FHRDHG+   NC
Subjt:  LKLPGRMKSSADRRDKSQYCLFHRDHGHSNKNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGAGATGCCCCAGAAGTTCAAGGTACCTACATTCAAGCTGTATGATGGCAAGAAAGACCCTGTTCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCA
CGGCGTCTCAGATGCAATCAGGTGTCGAGCTTTCTTTTTCACCCTAACAGGATCAGCCAAGCATCGGTTTGAAAGAGAACTGCGCAAGCCTCACATCAACCTCTTAACAG
TCAAACAACAGCCAGGTGAGATCTTGCGTGATTACATAATGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAGCGAGGGAGCAACCCTAGTAGCCATCACAGCC
GGATTGGAGGATGAGAGATTGCTCAATTCAATAGAGGAGTTACTGAAATCAAAGAGGTCAGAACGAGAGCACAAAAGACATTCTTCAGTCGATCAAGACAGAAAGAAAGA
TAAGAGACCGCGGACAGACGATAGTGGCCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTATGGTAAGTTCGAGAAATATATGCCAACAGCTGTTC
CACAGGAGCAAGTACTGATGGAGATCCAAAATACGAGACTCCTGAAATTGCCGGGGAGGATGAAGTCGAGTGCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCAC
CGGGACCATGGGCATTCAAACAAGAATTGTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGAGATGCCCCAGAAGTTCAAGGTACCTACATTCAAGCTGTATGATGGCAAGAAAGACCCTGTTCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCA
CGGCGTCTCAGATGCAATCAGGTGTCGAGCTTTCTTTTTCACCCTAACAGGATCAGCCAAGCATCGGTTTGAAAGAGAACTGCGCAAGCCTCACATCAACCTCTTAACAG
TCAAACAACAGCCAGGTGAGATCTTGCGTGATTACATAATGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAGCGAGGGAGCAACCCTAGTAGCCATCACAGCC
GGATTGGAGGATGAGAGATTGCTCAATTCAATAGAGGAGTTACTGAAATCAAAGAGGTCAGAACGAGAGCACAAAAGACATTCTTCAGTCGATCAAGACAGAAAGAAAGA
TAAGAGACCGCGGACAGACGATAGTGGCCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTATGGTAAGTTCGAGAAATATATGCCAACAGCTGTTC
CACAGGAGCAAGTACTGATGGAGATCCAAAATACGAGACTCCTGAAATTGCCGGGGAGGATGAAGTCGAGTGCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCAC
CGGGACCATGGGCATTCAAACAAGAATTGTATTTAA
Protein sequenceShow/hide protein sequence
MKAEMPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSAKHRFERELRKPHINLLTVKQQPGEILRDYIMRFNDEALQVEGYSEGATLVAITA
GLEDERLLNSIEELLKSKRSEREHKRHSSVDQDRKKDKRPRTDDSGRGRADHDHGRGRAHPYGKFEKYMPTAVPQEQVLMEIQNTRLLKLPGRMKSSADRRDKSQYCLFH
RDHGHSNKNCI