; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026004 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026004
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:26732861..26733577
RNA-Seq ExpressionLag0026004
SyntenyLag0026004
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5472015.1 hypothetical protein F2P56_008765, partial [Juglans regia]3.7e-1838.28Show/hide
Query:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD
        N+++  F+NQ DK RV  G P  FD++LL+  +  G+  L  + F Y SFW+  H LP  C  +   I +G+++G+ E V   + G   G  LRVRI V+
Subjt:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD

Query:  VNKPIRRGTNVKIRSMTGRTWIPISYEK
        +++P+ RG  +KI+  +   W+P SYEK
Subjt:  VNKPIRRGTNVKIRSMTGRTWIPISYEK

XP_018826935.1 uncharacterized protein At4g02000-like [Juglans regia]2.2e-1838.28Show/hide
Query:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD
        N+++  F+NQ DK RV  G PW FD++LL+  +  G+  L  ++F Y SFW+  H LP  C  +   I +G+++G+ E V   + G   G  LRV I V+
Subjt:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD

Query:  VNKPIRRGTNVKIRSMTGRTWIPISYEK
        +++P+ RG  +KI+  +   W+P SYEK
Subjt:  VNKPIRRGTNVKIRSMTGRTWIPISYEK

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]7.5e-1936.72Show/hide
Query:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD
        N++L  F    D+NR+++ GPW+FD  L++ ++        +++F+ +S WVHF  L   C  +     LGN+IG FE V +N      G  LRVR++ D
Subjt:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD

Query:  VNKPIRRGTNVKIRSMTGRTWIPISYEK
        V KP+ RG  + +    G  WIPI YE+
Subjt:  VNKPIRRGTNVKIRSMTGRTWIPISYEK

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.3e-2340Show/hide
Query:  LERRVEIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRT
        +E ++ +ES  +NL+L  F  + D NRV+K GPW FD  L++ +    + +++ELEF  ++FW+H   LP     +   I LGN+IG F  V  NE G +
Subjt:  LERRVEIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRT

Query:  GGETLRVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK
         G +LR+R+ +D+ KP+RRG  + I    G  WIPI YE+
Subjt:  GGETLRVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.0e-2037.78Show/hide
Query:  EIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETL
        E++S   NL+L  F    D+N++ K GPW+FD  L+L          +EL+F  +  WV F  LP  C  R   I LGN++G FE    ++     G  L
Subjt:  EIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETL

Query:  RVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK
        RVR+ +D++KP+RRG  + +    G  WIPI YE+
Subjt:  RVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK

TrEMBL top hitse value%identityAlignment
A0A2I4F5K7 uncharacterized protein At4g02000-like1.0e-1838.28Show/hide
Query:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD
        N+++  F+NQ DK RV  G PW FD++LL+  +  G+  L  ++F Y SFW+  H LP  C  +   I +G+++G+ E V   + G   G  LRV I V+
Subjt:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD

Query:  VNKPIRRGTNVKIRSMTGRTWIPISYEK
        +++P+ RG  +KI+  +   W+P SYEK
Subjt:  VNKPIRRGTNVKIRSMTGRTWIPISYEK

A0A5C7H9Y2 CCHC-type domain-containing protein3.1e-1831.65Show/hide
Query:  ERRVEIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTG
        +  V +E    N++  +F+N  D+ R+++GGPW FD  LL+  +  G+  +T+L+F+Y+ FW+  H LP  C  R   + LG  +G+ + +   E G   
Subjt:  ERRVEIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTG

Query:  GETLRVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK
        G+ +R+R+ +DV  P++RG  V +        + I YE+
Subjt:  GETLRVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK

A0A6J1BSZ1 uncharacterized protein LOC1110054813.6e-1936.72Show/hide
Query:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD
        N++L  F    D+NR+++ GPW+FD  L++ ++        +++F+ +S WVHF  L   C  +     LGN+IG FE V +N      G  LRVR++ D
Subjt:  NLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVD

Query:  VNKPIRRGTNVKIRSMTGRTWIPISYEK
        V KP+ RG  + +    G  WIPI YE+
Subjt:  VNKPIRRGTNVKIRSMTGRTWIPISYEK

A0A6J1DU55 uncharacterized protein LOC1110231356.4e-2440Show/hide
Query:  LERRVEIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRT
        +E ++ +ES  +NL+L  F  + D NRV+K GPW FD  L++ +    + +++ELEF  ++FW+H   LP     +   I LGN+IG F  V  NE G +
Subjt:  LERRVEIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRT

Query:  GGETLRVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK
         G +LR+R+ +D+ KP+RRG  + I    G  WIPI YE+
Subjt:  GGETLRVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK

A0A6J1DX30 uncharacterized protein LOC1110248741.5e-2037.78Show/hide
Query:  EIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETL
        E++S   NL+L  F    D+N++ K GPW+FD  L+L          +EL+F  +  WV F  LP  C  R   I LGN++G FE    ++     G  L
Subjt:  EIESSRQNLYLCKFKNQRDKNRVVKGGPWSFDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETL

Query:  RVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK
        RVR+ +D++KP+RRG  + +    G  WIPI YE+
Subjt:  RVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAAGAAGTCTGGGGAGCCGGCACAATGGGATCCTTAAGTGATCAGAATAACAGAGAAACAAACAGGGAGGAAAAGATGGAATCGACAGTAGGCATAGAGGAAGT
TTATGAGCAGATGGAGAATCTAAGGATTCTCGAACAGGAGGAAAGTAAAAGAGTGGTTGAGATTGAGGACGACGATATAGATGAAGCGGATAGAGATTTTCAAGACACTA
CAGGGCTGGAGAGAAGAGTTGAAATAGAAAGCTCAAGACAGAATTTATACCTTTGCAAATTTAAAAACCAAAGAGACAAGAACAGAGTGGTGAAGGGTGGCCCTTGGAGC
TTTGACGATGATTTGCTACTTTTCGAAGATCAACGGGGAAATTGCAGCTTGACAGAGCTAGAATTCAAGTATATATCATTTTGGGTGCATTTTCATAAGTTACCACGGGT
TTGTTTTTGCAGGATATATGTTATTGCGTTAGGGAATTCAATCGGTGAGTTCGAATGGGTTGGCACTAATGAGTTCGGAAGGACTGGAGGAGAGACACTCAGAGTCAGGA
TCAAAGTGGACGTCAACAAACCAATCAGACGAGGAACAAACGTTAAAATCAGATCAATGACAGGCAGAACTTGGATCCCAATCAGTTATGAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGAAGAAGTCTGGGGAGCCGGCACAATGGGATCCTTAAGTGATCAGAATAACAGAGAAACAAACAGGGAGGAAAAGATGGAATCGACAGTAGGCATAGAGGAAGT
TTATGAGCAGATGGAGAATCTAAGGATTCTCGAACAGGAGGAAAGTAAAAGAGTGGTTGAGATTGAGGACGACGATATAGATGAAGCGGATAGAGATTTTCAAGACACTA
CAGGGCTGGAGAGAAGAGTTGAAATAGAAAGCTCAAGACAGAATTTATACCTTTGCAAATTTAAAAACCAAAGAGACAAGAACAGAGTGGTGAAGGGTGGCCCTTGGAGC
TTTGACGATGATTTGCTACTTTTCGAAGATCAACGGGGAAATTGCAGCTTGACAGAGCTAGAATTCAAGTATATATCATTTTGGGTGCATTTTCATAAGTTACCACGGGT
TTGTTTTTGCAGGATATATGTTATTGCGTTAGGGAATTCAATCGGTGAGTTCGAATGGGTTGGCACTAATGAGTTCGGAAGGACTGGAGGAGAGACACTCAGAGTCAGGA
TCAAAGTGGACGTCAACAAACCAATCAGACGAGGAACAAACGTTAAAATCAGATCAATGACAGGCAGAACTTGGATCCCAATCAGTTATGAGAAATAA
Protein sequenceShow/hide protein sequence
MNEEVWGAGTMGSLSDQNNRETNREEKMESTVGIEEVYEQMENLRILEQEESKRVVEIEDDDIDEADRDFQDTTGLERRVEIESSRQNLYLCKFKNQRDKNRVVKGGPWS
FDDDLLLFEDQRGNCSLTELEFKYISFWVHFHKLPRVCFCRIYVIALGNSIGEFEWVGTNEFGRTGGETLRVRIKVDVNKPIRRGTNVKIRSMTGRTWIPISYEK