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Lag0026008 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026008
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:26785513..26786295
RNA-Seq ExpressionLag0026008
SyntenyLag0026008
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015383577.1 uncharacterized protein LOC107176071 [Citrus sinensis]2.7e-1543.81Show/hide
Query:  DLQKSKDSKEQ------DMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRR
        DLQ+     EQ        ++++ + +PPFT+E M+   P  F++P  +PYDG+KDP++H+  Y+S M+  GV  AI CRAF  TL+G+A+ WF RL+  
Subjt:  DLQKSKDSKEQ------DMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRR

Query:  SISSF
        SISSF
Subjt:  SISSF

XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]2.2e-1758.33Show/hide
Query:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK
        MK+++P KFK+P  K YDG  DP+ HL+ Y  W D +G+ +AIRCR F FTLTGS + WF++LKR+SISSFK
Subjt:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]9.3e-1656.94Show/hide
Query:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK
        MK++   KFK+P    YDG  DP+ HL+AY+ W D + + +AIRCR F FTLTGSA++WF +LKR SISSFK
Subjt:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.3e-2134.04Show/hide
Query:  LVRDPRKGKEPMEHTAESETGSKGKKTDSMTNKVRGLKPTDRTILRSPESSTLKGRDCTVSTPSYGHTKTNLRNLIEEKRRSAKTAESEARAAEAEARAT
        LVRDP+KGK P E   E  T S G K         G     RT +  P  +  + +    +     H   N   +  +K + A   ES  +         
Subjt:  LVRDPRKGKEPMEHTAESETGSKGKKTDSMTNKVRGLKPTDRTILRSPESSTLKGRDCTVSTPSYGHTKTNLRNLIEEKRRSAKTAESEARAAEAEARAT

Query:  EAEASATEAEAKKDNLPWKTELLNTLKELRNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHG
                                            + S   K  D+EEL+DQ D PFTEE M++++P KFK+P  K +D   DPV HL+AY+ WMD +G
Subjt:  EAEASATEAEAKKDNLPWKTELLNTLKELRNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHG

Query:  VLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFKN
        V +A+RCR F  TL GSA+ WF +LKR SISSFK+
Subjt:  VLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFKN

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]9.3e-2453.91Show/hide
Query:  LNTLKELRNPQGDLQKSKDSKEQ--DMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKH
        LN  K +  P+   +K  + KE+  D+EEL+ Q D PFTEE M++++P KFK+P  KP+DG  +PV HL+AY+ WMD +GV DAIRCR F  TL GSA+ 
Subjt:  LNTLKELRNPQGDLQKSKDSKEQ--DMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKH

Query:  WFERLKRRSISSFKN
        WF +LKR SISSFK+
Subjt:  WFERLKRRSISSFKN

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.1e-1758.33Show/hide
Query:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK
        MK+++P KFK+P  K YDG  DP+ HL+ Y  W D +G+ +AIRCR F FTLTGS + WF++LKR+SISSFK
Subjt:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK

A0A6J1D7D2 uncharacterized protein LOC1110183071.3e-1556.58Show/hide
Query:  EEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFKN
        EE MK ++P KFK+P  K +DG  D V HL+AY+ WMD +GV +A++CR F  TL+GSA+ WF +LKR SISSFK+
Subjt:  EEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFKN

A0A6J1DWY0 uncharacterized protein LOC1110252931.6e-2134.04Show/hide
Query:  LVRDPRKGKEPMEHTAESETGSKGKKTDSMTNKVRGLKPTDRTILRSPESSTLKGRDCTVSTPSYGHTKTNLRNLIEEKRRSAKTAESEARAAEAEARAT
        LVRDP+KGK P E   E  T S G K         G     RT +  P  +  + +    +     H   N   +  +K + A   ES  +         
Subjt:  LVRDPRKGKEPMEHTAESETGSKGKKTDSMTNKVRGLKPTDRTILRSPESSTLKGRDCTVSTPSYGHTKTNLRNLIEEKRRSAKTAESEARAAEAEARAT

Query:  EAEASATEAEAKKDNLPWKTELLNTLKELRNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHG
                                            + S   K  D+EEL+DQ D PFTEE M++++P KFK+P  K +D   DPV HL+AY+ WMD +G
Subjt:  EAEASATEAEAKKDNLPWKTELLNTLKELRNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHG

Query:  VLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFKN
        V +A+RCR F  TL GSA+ WF +LKR SISSFK+
Subjt:  VLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFKN

A0A6J1DZ49 uncharacterized protein LOC1110248514.5e-1656.94Show/hide
Query:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK
        MK++   KFK+P    YDG  DP+ HL+AY+ W D + + +AIRCR F FTLTGSA++WF +LKR SISSFK
Subjt:  MKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFK

A0A6J1E1E7 uncharacterized protein LOC1110255484.5e-2453.91Show/hide
Query:  LNTLKELRNPQGDLQKSKDSKEQ--DMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKH
        LN  K +  P+   +K  + KE+  D+EEL+ Q D PFTEE M++++P KFK+P  KP+DG  +PV HL+AY+ WMD +GV DAIRCR F  TL GSA+ 
Subjt:  LNTLKELRNPQGDLQKSKDSKEQ--DMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSWMDFHGVLDAIRCRAFFFTLTGSAKH

Query:  WFERLKRRSISSFKN
        WF +LKR SISSFK+
Subjt:  WFERLKRRSISSFKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATAATTTCTCCAGGATACTTCGTATCTTGGATAAACCTGGTCATAGTACTAAAACCCTTAATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCAT
GGAGCACACTGCAGAATCAGAGACGGGGTCGAAGGGAAAGAAGACTGACAGCATGACCAACAAGGTTAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAG
AGTCAAGCACACTTAAGGGACGTGACTGTACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAAACCTGAGAAATCTAATCGAGGAGAAGCGCAGAAGTGCCAAAACT
GCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTACCGAGGCCGAGGCTAGTGCAACCGAGGCCGAGGCCAAGAAAGACAATCTCCCTTGGAAGACTGAGCT
TCTAAACACACTAAAGGAGCTTAGAAATCCACAAGGAGACCTGCAGAAGTCAAAGGACTCAAAAGAGCAAGACATGGAAGAACTAATCGACCAAGTCGACCCACCCTTCA
CAGAAGAAGCCATGAAAGATGAGATGCCCCAGAAGTTCAAGGTACCTATATTCAAGCCGTATGATGGCAAGAAAGACCCTGTTCAACATCTAAATGCCTACAAAAGCTGG
ATGGACTTCCACGGCGTCTTAGATGCAATTAGGTGTCGAGCTTTCTTTTTCACCCTAACAGGATCAGCCAAGCATTGGTTTGAAAGGTTGAAAAGGAGGTCCATCAGTTC
TTTCAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCATAATTTCTCCAGGATACTTCGTATCTTGGATAAACCTGGTCATAGTACTAAAACCCTTAATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCAT
GGAGCACACTGCAGAATCAGAGACGGGGTCGAAGGGAAAGAAGACTGACAGCATGACCAACAAGGTTAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAG
AGTCAAGCACACTTAAGGGACGTGACTGTACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAAACCTGAGAAATCTAATCGAGGAGAAGCGCAGAAGTGCCAAAACT
GCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTACCGAGGCCGAGGCTAGTGCAACCGAGGCCGAGGCCAAGAAAGACAATCTCCCTTGGAAGACTGAGCT
TCTAAACACACTAAAGGAGCTTAGAAATCCACAAGGAGACCTGCAGAAGTCAAAGGACTCAAAAGAGCAAGACATGGAAGAACTAATCGACCAAGTCGACCCACCCTTCA
CAGAAGAAGCCATGAAAGATGAGATGCCCCAGAAGTTCAAGGTACCTATATTCAAGCCGTATGATGGCAAGAAAGACCCTGTTCAACATCTAAATGCCTACAAAAGCTGG
ATGGACTTCCACGGCGTCTTAGATGCAATTAGGTGTCGAGCTTTCTTTTTCACCCTAACAGGATCAGCCAAGCATTGGTTTGAAAGGTTGAAAAGGAGGTCCATCAGTTC
TTTCAAGAATTAG
Protein sequenceShow/hide protein sequence
MDHNFSRILRILDKPGHSTKTLNERLVRDPRKGKEPMEHTAESETGSKGKKTDSMTNKVRGLKPTDRTILRSPESSTLKGRDCTVSTPSYGHTKTNLRNLIEEKRRSAKT
AESEARAAEAEARATEAEASATEAEAKKDNLPWKTELLNTLKELRNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEAMKDEMPQKFKVPIFKPYDGKKDPVQHLNAYKSW
MDFHGVLDAIRCRAFFFTLTGSAKHWFERLKRRSISSFKN