; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026015 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026015
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr10:26877603..26878631
RNA-Seq ExpressionLag0026015
SyntenyLag0026015
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]1.5e-5033.62Show/hide
Query:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNN---LKRSSLSKSKGPWRNIVKHHS
        + R FLW+G  + +N   HLV+W  +    ++GGLG+ S+ ++N+AL AKW WRF  E  +LW ++IK+ YG  +N    K+      + PWR I K + 
Subjt:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNN---LKRSSLSKSKGPWRNIVKHHS

Query:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWN--DLNLFWDLKLGRNLKDSEATEWADLSLILDPIRL-SQTIDSWKWPL
                 +GNGE   FW D W+    L   +P LY LS+ K   +    N  ++ L WD    RNL ++E  E   L  IL  +RL     D   W +
Subjt:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWN--DLNLFWDLKLGRNLKDSEATEWADLSLILDPIRL-SQTIDSWKWPL

Query:  NTNGSFSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITT
           GSFS KS  + +  T+S++ P   ++IWK   P K++FF+W  A+  INT D +Q+R P + LSP  C  CK + E+  H+F  C ++ + W R+  
Subjt:  NTNGSFSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITT

Query:  PFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          G  +++P    +LL+ +L          +L   +I A +W++W E+
Subjt:  PFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.6e-5333.43Show/hide
Query:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSP---NNLKRSSLSKSKGPWRNIVKHHSL
        +R FLW G   +  H   L++W  ++ P ++GGLG+ S+   N ALL KW W+F  EK  LW++LI + Y      +       S +  PW+ + +  S 
Subjt:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSP---NNLKRSSLSKSKGPWRNIVKHHSL

Query:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG
            I  ++ +GED  FW D+W  N  L+   P L+ LS  K  SVKE WN  +  W L + R L+D E   W ++   L     ++      W LN+N 
Subjt:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG

Query:  SFSTKSLTTDMAG---TSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP
         F T S+   +A    + +   P+L K +WK  +PKK KFF+W L H  INT D LQKR+P   LSP  C +C    E   H+F  CP++ + WS+    
Subjt:  SFSTKSLTTDMAG---TSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP

Query:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          W+   P  V+ L+  ++     +N K L+  N      W +W E+
Subjt:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-5434.29Show/hide
Query:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL
        +R FLW G   +  H   L++W  ++ P ++GGLG+ S+   N ALL KW W+F  EK  LW++LI + Y      +   R   S +  PW+ +    S 
Subjt:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL

Query:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG
            I  ++ +GED  FW D+W  N  L+   P L+ LS  K  SVK++WN     W++ + R L+D E   W ++   L      +      W LN+N 
Subjt:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG

Query:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP
         F T S+  D++  S+      PSL K +WK ++PKK KFF+W L H  INT D LQKR+P   LSP  C +C    E   H+F  CP++ + WS+    
Subjt:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP

Query:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          W+   P  V+  LA ++     K  K L+  N I    W +W E+
Subjt:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.1e-5434.01Show/hide
Query:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL
        +R FLW G   +  H   L++W  ++ P ++GGLG+  +   N ALL KW W+F  EK  LW++LI + Y      +   R   S +  PW+ +    S 
Subjt:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL

Query:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG
            I  ++ +GED  FW D+W  N  L+   P L+ LS  K  SVK++WN     W++ + R L+D E   W ++   L      +      W LN+N 
Subjt:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG

Query:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP
         F T S+  D++  S+      PSL K +WK ++PKK KFF+W L H  INT D LQKR+P   LSP  C +C    E   H+F  CP++ + WS+    
Subjt:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP

Query:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          W+   P  V+  LA ++     K  K L+  N I    W +W E+
Subjt:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

RVW74542.1 putative ribonuclease H protein [Vitis vinifera]2.0e-5033.81Show/hide
Query:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNN---LKRSSLSKSKGPWRNIVKHHS
        M R FLW G  + +    HLV W+ +  P  +GGLG   +  +N ALL KW WR+ +E  ALW ++I +IYGS +N   +  +     + PW+ I   + 
Subjt:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNN---LKRSSLSKSKGPWRNIVKHHS

Query:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLF-WDLKLGRNLKDSEATEWADLSLILDPIRLSQTI-DSWKWPLN
          +      +GNG+   FW D W     L  +YP L ++   K A +  +      F W+    RNL DSE  +   L    D + +S ++ D   W L+
Subjt:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLF-WDLKLGRNLKDSEATEWADLSLILDPIRLSQTI-DSWKWPLN

Query:  TNGSFSTKS--LTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRIT
        ++G F+ KS  L       S  I P+  K +W    P KVK F+W +AHK +NTND+LQ R PY  LSP  C LC    E+  H+F  C      W R+ 
Subjt:  TNGSFSTKS--LTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRIT

Query:  TPFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
              ++ P  + D+LAS+  G  F     +LW N   A  W +WRE+
Subjt:  TPFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein4.7e-5333.43Show/hide
Query:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSP---NNLKRSSLSKSKGPWRNIVKHHSL
        +R FLW G   +  H   L++W  ++ P ++GGLG+ S+   N ALL KW W+F  EK  LW++LI + Y      +       S +  PW+ + +  S 
Subjt:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSP---NNLKRSSLSKSKGPWRNIVKHHSL

Query:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG
            I  ++ +GED  FW D+W  N  L+   P L+ LS  K  SVKE WN  +  W L + R L+D E   W ++   L     ++      W LN+N 
Subjt:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG

Query:  SFSTKSLTTDMAG---TSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP
         F T S+   +A    + +   P+L K +WK  +PKK KFF+W L H  INT D LQKR+P   LSP  C +C    E   H+F  CP++ + WS+    
Subjt:  SFSTKSLTTDMAG---TSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP

Query:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          W+   P  V+ L+  ++     +N K L+  N      W +W E+
Subjt:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein8.5e-5534.29Show/hide
Query:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL
        +R FLW G   +  H   L++W  ++ P ++GGLG+ S+   N ALL KW W+F  EK  LW++LI + Y      +   R   S +  PW+ +    S 
Subjt:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL

Query:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG
            I  ++ +GED  FW D+W  N  L+   P L+ LS  K  SVK++WN     W++ + R L+D E   W ++   L      +      W LN+N 
Subjt:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG

Query:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP
         F T S+  D++  S+      PSL K +WK ++PKK KFF+W L H  INT D LQKR+P   LSP  C +C    E   H+F  CP++ + WS+    
Subjt:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP

Query:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          W+   P  V+  LA ++     K  K L+  N I    W +W E+
Subjt:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein2.5e-5434.01Show/hide
Query:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL
        +R FLW G   +  H   L++W  ++ P ++GGLG+  +   N ALL KW W+F  EK  LW++LI + Y      +   R   S +  PW+ +    S 
Subjt:  FRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLK---RSSLSKSKGPWRNIVKHHSL

Query:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG
            I  ++ +GED  FW D+W  N  L+   P L+ LS  K  SVK++WN     W++ + R L+D E   W ++   L      +      W LN+N 
Subjt:  ITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNG

Query:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP
         F T S+  D++  S+      PSL K +WK ++PKK KFF+W L H  INT D LQKR+P   LSP  C +C    E   H+F  CP++ + WS+    
Subjt:  SFSTKSLTTDMAGTSSL---IDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTP

Query:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          W+   P  V+  LA ++     K  K L+  N I    W +W E+
Subjt:  FGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

A0A5H2XQW2 TatD related DNase7.4e-5133.62Show/hide
Query:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNN---LKRSSLSKSKGPWRNIVKHHS
        + R FLW+G  + +N   HLV+W  +    ++GGLG+ S+ ++N+AL AKW WRF  E  +LW ++IK+ YG  +N    K+      + PWR I K + 
Subjt:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNN---LKRSSLSKSKGPWRNIVKHHS

Query:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWN--DLNLFWDLKLGRNLKDSEATEWADLSLILDPIRL-SQTIDSWKWPL
                 +GNGE   FW D W+    L   +P LY LS+ K   +    N  ++ L WD    RNL ++E  E   L  IL  +RL     D   W +
Subjt:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWN--DLNLFWDLKLGRNLKDSEATEWADLSLILDPIRL-SQTIDSWKWPL

Query:  NTNGSFSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITT
           GSFS KS  + +  T+S++ P   ++IWK   P K++FF+W  A+  INT D +Q+R P + LSP  C  CK + E+  H+F  C ++ + W R+  
Subjt:  NTNGSFSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITT

Query:  PFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
          G  +++P    +LL+ +L          +L   +I A +W++W E+
Subjt:  PFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

A0A803P465 Uncharacterized protein2.2e-5535.51Show/hide
Query:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNL---KRSSLSKSKGPWRNIVKHHS
        M R FLW+G   +    +HLV W+ +  P  +GGLG+  +  +NK+LL KW WRF  E+ +LW +++ + YG  +NL   K+ S    KGPWR+I   + 
Subjt:  MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNL---KRSSLSKSKGPWRNIVKHHS

Query:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNL------FWDLKLGRNLKDSEATEWADLSLILDPIR-LSQTIDSW
             +  +LG G+   FW D WI++  L + +P L  +S+ +   +KE+  D  L       W+ K  RNL D E      L   ++ +R LS + DS 
Subjt:  LITSRIVHQLGNGEDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNL------FWDLKLGRNLKDSEATEWADLSLILDPIR-LSQTIDSW

Query:  KWPLNTNGSFSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWS
         W  + +G FS KS  + M    S       K++WK   P KVK F W LA + +N +D +QKR P++ +SPG C  CK   ES  H+F  C F G  W 
Subjt:  KWPLNTNGSFSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWS

Query:  RITTPFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK
         +   FG S+++P  V  L+AS L+G      K  LW + I A  W++W E+
Subjt:  RITTPFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNIIRAFYWSLWREK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.4e-2525.7Show/hide
Query:  RMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLKRSSLSKSKGPWRNIVKHHSLITSR
        R FLW  G+      QHLVKW  +  P  +GGLG+ +    N+AL++K  WR  QEK +LW  +++  Y     ++ S     KG W +  +  ++    
Subjt:  RMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLKRSSLSKSKGPWRNIVKHHSLITSR

Query:  IVHQ-----LGNGEDTCFWTDSWINNLSLATRYPLL-----YKLSQCKTASVKEVWNDLNLFWDL-KLGRNLKDSEATEWADLSLILDPIRLSQTIDSWK
        +V        G+G+   FWTD W++        PLL      + + C T   K++W      WD  K+     ++   E    +++LD +  ++  D   
Subjt:  IVHQ-----LGNGEDTCFWTDSWINNLSLATRYPLL-----YKLSQCKTASVKEVWNDLNLFWDL-KLGRNLKDSEATEWADLSLILDPIRLSQTIDSWK

Query:  WPLNTNGSFSTKSLTTDMAGTSSLIDPSLA---KAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEF
        W  + +G FS +S   +M     +  P++A     +WK   P++VK FLW + ++A+ T +   +R  ++  S   C +CK   ES  H+   CP     
Subjt:  WPLNTNGSFSTKSLTTDMAGTSSLIDPSLA---KAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEF

Query:  WSRITTPFGWSFILPGRVEDLLASSLMGHPFKNI------KALLWLNIIRAFYWSLWR
        W R+        +   R +   + SL    + N+      + + W  I     W  W+
Subjt:  WSRITTPFGWSFILPGRVEDLLASSLMGHPFKNI------KALLWLNIIRAFYWSLWR

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein7.2e-0626.98Show/hide
Query:  KAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTPFGWSFILPGRVEDLLASSLMGHPFKN
        +AIWK +   K+K FLW     A+ TN  L+ R   I   P  C  C  ++E+  HI   CP+    W       G  +  P   ED L   +     + 
Subjt:  KAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTPFGWSFILPGRVEDLLASSLMGHPFKN

Query:  IKAL-----LWLNIIRAFYWSLWREK
          +L      W+       W LW+ +
Subjt:  IKAL-----LWLNIIRAFYWSLWREK

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-1122.97Show/hide
Query:  FLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLKRSSLSKSKGPWRNIVKHHSLITSRIV
        FLW G     N  +  V W ++  P D+GGLG+ S+ + NK               + W        GS               W+ I+KH +L +  + 
Subjt:  FLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLKRSSLSKSKGPWRNIVKHHSLITSRIV

Query:  HQLGNGEDTCFWTDSW--INNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTN---GS
        H + NG +T FW D+W  I  L   T +     +     ASV E   +          R  +        D+   +    L+   D+ +W  N +     
Subjt:  HQLGNGEDTCFWTDSW--INNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTN---GS

Query:  FSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGE--FWSRIT
        F+TK   T  A     +  +  K +W  +   K     W      + T D   + + +   +   C LC    E++ H+F  CP++ E  F +R T
Subjt:  FSTKSLTTDMAGTSSLIDPSLAKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGE--FWSRIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAGGATGTTTCTTTGGAAAGGTGGGACTCAGACTCGCAATCATGTACAGCATCTTGTCAAATGGGAAAATCTCCTACATCCCATTGATCAAGGTGGCCTAGGTCT
TCTTTCCATGATGGACAAAAACAAAGCCTTATTGGCTAAGTGGACTTGGAGATTCAATCAGGAAAAATATGCTCTTTGGAGAAAGCTCATCAAAGCCATCTATGGATCCC
CAAACAACCTGAAAAGGTCTTCCCTATCTAAATCCAAAGGTCCATGGCGCAATATTGTTAAGCACCACAGCCTCATTACCAGCCGTATAGTTCATCAGCTTGGAAATGGT
GAGGATACTTGTTTTTGGACCGACTCTTGGATAAACAATTTGTCGTTGGCTACTAGATATCCCCTTCTTTATAAACTTTCCCAATGCAAAACAGCATCTGTCAAGGAGGT
TTGGAATGATTTGAATCTTTTTTGGGACCTTAAATTGGGCAGGAATTTGAAGGACTCCGAGGCTACAGAATGGGCTGATCTTAGCTTGATTCTCGACCCCATTCGTTTAT
CCCAAACAATAGACTCCTGGAAATGGCCTCTCAATACTAATGGCAGCTTCTCCACTAAATCCCTCACCACCGACATGGCTGGAACCTCTAGCCTTATAGACCCATCTTTG
GCCAAGGCAATCTGGAAAGAGAACTATCCCAAGAAAGTTAAATTTTTCTTATGGGAGCTAGCACATAAAGCCATCAATACCAACGACATTTTACAAAAGCGTATGCCTTA
TATTCCTCTTTCCCCCGGGAGGTGTCCTTTATGCAAAGCGGATGACGAATCACAGACTCATATATTTGCCTTATGCCCCTTTGCCGGAGAATTTTGGTCCAGAATTACGA
CTCCCTTTGGCTGGTCCTTTATTCTCCCGGGTCGAGTGGAGGATCTCCTCGCATCATCCTTGATGGGCCACCCTTTCAAGAATATTAAAGCACTGTTATGGCTGAACATC
ATCAGAGCCTTCTATTGGAGCTTGTGGAGAGAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAGGATGTTTCTTTGGAAAGGTGGGACTCAGACTCGCAATCATGTACAGCATCTTGTCAAATGGGAAAATCTCCTACATCCCATTGATCAAGGTGGCCTAGGTCT
TCTTTCCATGATGGACAAAAACAAAGCCTTATTGGCTAAGTGGACTTGGAGATTCAATCAGGAAAAATATGCTCTTTGGAGAAAGCTCATCAAAGCCATCTATGGATCCC
CAAACAACCTGAAAAGGTCTTCCCTATCTAAATCCAAAGGTCCATGGCGCAATATTGTTAAGCACCACAGCCTCATTACCAGCCGTATAGTTCATCAGCTTGGAAATGGT
GAGGATACTTGTTTTTGGACCGACTCTTGGATAAACAATTTGTCGTTGGCTACTAGATATCCCCTTCTTTATAAACTTTCCCAATGCAAAACAGCATCTGTCAAGGAGGT
TTGGAATGATTTGAATCTTTTTTGGGACCTTAAATTGGGCAGGAATTTGAAGGACTCCGAGGCTACAGAATGGGCTGATCTTAGCTTGATTCTCGACCCCATTCGTTTAT
CCCAAACAATAGACTCCTGGAAATGGCCTCTCAATACTAATGGCAGCTTCTCCACTAAATCCCTCACCACCGACATGGCTGGAACCTCTAGCCTTATAGACCCATCTTTG
GCCAAGGCAATCTGGAAAGAGAACTATCCCAAGAAAGTTAAATTTTTCTTATGGGAGCTAGCACATAAAGCCATCAATACCAACGACATTTTACAAAAGCGTATGCCTTA
TATTCCTCTTTCCCCCGGGAGGTGTCCTTTATGCAAAGCGGATGACGAATCACAGACTCATATATTTGCCTTATGCCCCTTTGCCGGAGAATTTTGGTCCAGAATTACGA
CTCCCTTTGGCTGGTCCTTTATTCTCCCGGGTCGAGTGGAGGATCTCCTCGCATCATCCTTGATGGGCCACCCTTTCAAGAATATTAAAGCACTGTTATGGCTGAACATC
ATCAGAGCCTTCTATTGGAGCTTGTGGAGAGAGAAATAA
Protein sequenceShow/hide protein sequence
MFRMFLWKGGTQTRNHVQHLVKWENLLHPIDQGGLGLLSMMDKNKALLAKWTWRFNQEKYALWRKLIKAIYGSPNNLKRSSLSKSKGPWRNIVKHHSLITSRIVHQLGNG
EDTCFWTDSWINNLSLATRYPLLYKLSQCKTASVKEVWNDLNLFWDLKLGRNLKDSEATEWADLSLILDPIRLSQTIDSWKWPLNTNGSFSTKSLTTDMAGTSSLIDPSL
AKAIWKENYPKKVKFFLWELAHKAINTNDILQKRMPYIPLSPGRCPLCKADDESQTHIFALCPFAGEFWSRITTPFGWSFILPGRVEDLLASSLMGHPFKNIKALLWLNI
IRAFYWSLWREK