CuGenDBv2

Gene ID	Lag0026040
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	syndetin isoform X1
Genome location	chr10:27647638..27668283
RNA-Seq Expression	Lag0026040
Synteny	Lag0026040
Gene Ontology terms	GO:0032456 - endocytic recycling (biological process) GO:0042147 - retrograde transport, endosome to Golgi (biological process) GO:0005829 - cytosol (cellular component) GO:1990745 - EARP complex (cellular component)
InterPro domains	IPR019515 - Vacuolar protein sorting-associated protein 54, N-terminal IPR040047 - Syndetin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008462106.1 PREDICTED: syndetin [Cucumis melo]

6.8e-117

95.73

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGS LGNPLAFDGDLSEGFETSRFLFFVPF LLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG+E+EELEEVFYEE+FDPVRHVLEHVPSEENDLEYLEKQATKRL QLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHL SSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

XP_011654226.1 syndetin isoform X1 [Cucumis sativus]

8.8e-117

95.73

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGS LGNPLAFDGDLSEGFET RFLFFVPF LLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG+E+EELEEVFYEE+FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHL SSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

XP_022152900.1 syndetin isoform X1 [Momordica charantia]

1.4e-117

96.58

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGSVLGNPLAFDGDLSEGF TSRFLFFVPFFLLQGGGMDLS+VGEKILSSVRSARSLGLLP TSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG E+EELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

XP_022152901.1 syndetin isoform X2 [Momordica charantia]

1.4e-117

96.58

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGSVLGNPLAFDGDLSEGF TSRFLFFVPFFLLQGGGMDLS+VGEKILSSVRSARSLGLLP TSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG E+EELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

XP_038895533.1 syndetin isoform X1 [Benincasa hispida]

3.0e-117

96.15

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Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGSVLGNPLAFDGDLSEGFETSRFLFFVPF LLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVAR LAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG+E+EELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAE LS HVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHL SSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LV98 Vps54_N domain-containing protein

4.3e-117

95.73

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGS LGNPLAFDGDLSEGFET RFLFFVPF LLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG+E+EELEEVFYEE+FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHL SSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

A0A1S3CG39 syndetin

3.3e-117

95.73

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGS LGNPLAFDGDLSEGFETSRFLFFVPF LLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG+E+EELEEVFYEE+FDPVRHVLEHVPSEENDLEYLEKQATKRL QLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHL SSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

A0A6J1DF95 syndetin isoform X1

6.6e-118

96.58

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGSVLGNPLAFDGDLSEGF TSRFLFFVPFFLLQGGGMDLS+VGEKILSSVRSARSLGLLP TSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG E+EELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

A0A6J1DJ46 syndetin isoform X2

6.6e-118

96.58

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS
        MQPN FPFGSVLGNPLAFDGDLSEGF TSRFLFFVPFFLLQGGGMDLS+VGEKILSSVRSARSLGLLP TSDRPEVPARAVAAAAVARALAGLPPHQRFS
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFS

Query:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN
        +SSSSEELSSIYGSRNHG E+EELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKIAN
Subjt:  ISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIAN

Query:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
Subjt:  VICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

A0A6J1HWS6 syndetin

4.4e-114

93.64

Show/hide

Query:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPE--VPARAVAAAAVARALAGLPPHQR
        MQPN FPFGSVLGNPL ++GDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPT +DRPE  VPARAVAAAAVARALAGLPPHQR
Subjt:  MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPE--VPARAVAAAAVARALAGLPPHQR

Query:  FSISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKI
        FS+ SSSEELSSIYGSR+HG+E+EELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQAT RLAQLDKVAE LSRHVMEHHEVMVKGMHLVRELEKDLKI
Subjt:  FSISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKI

Query:  ANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        ANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
Subjt:  ANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

SwissProt top hits

e value

%identity

Alignment

F1LSG8 Syndetin

6.1e-04

31.36

Show/hide

Query:  IEELEEVFYEED-FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIANVICRNGKRHLT---SSMLE
        I  +E+V++  D FD V++ LE +P   N L+ LE+   K   Q   V++ ++  ++E     VK +  V  L+  L++A VIC N +RHL        +
Subjt:  IEELEEVFYEED-FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIANVICRNGKRHLT---SSMLE

Query:  VSRDLIVNSNSKKKQALL
         S  L+  +N +K+Q L+
Subjt:  VSRDLIVNSNSKKKQALL

Q8CI71 Syndetin

7.2e-05

32.2

Show/hide

Query:  IEELEEVFYEED-FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIANVICRNGKRHLT---SSMLE
        I  +E+V++  D FD V++ LE +P   N L+ LE+   K   Q   V++ ++  ++E     VK +  V  L+  L++A VIC NG+RHL        +
Subjt:  IEELEEVFYEED-FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIANVICRNGKRHLT---SSMLE

Query:  VSRDLIVNSNSKKKQALL
         S  L+  +N +K+Q L+
Subjt:  VSRDLIVNSNSKKKQALL

Q96JG6 Syndetin

2.8e-04

32.2

Show/hide

Query:  IEELEEVFYEED-FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIANVICRNGKRHLT---SSMLE
        I  +E+V++  D FD V++ LE +P   N L+ LE    K   Q   V++ ++  ++E     VK +  V  L+  L++A VIC NG+RHL        +
Subjt:  IEELEEVFYEED-FDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIANVICRNGKRHLT---SSMLE

Query:  VSRDLIVNSNSKKKQALL
         S  L+  +N +K+Q L+
Subjt:  VSRDLIVNSNSKKKQALL

Arabidopsis top hits

e value

%identity

Alignment

AT2G27900.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

1.2e-84

72.24

Show/hide

Query:  MQPNP-FPFGSVLGNPLAFD--GDLSE-----GFETSRFLFFVPFFLLQGGG-MDLSKVGEKILSSVRSARSLGLL--PTTSDRPEVPARAVAAAAVARA
        MQPN  FPFGSVLGNP  F+  GDL+E      FE+SR  F +PF L QG G MDLSKVGEK LSSV+SA SLGLL  P+ SDRPE+PARA AAAAVARA
Subjt:  MQPNP-FPFGSVLGNPLAFD--GDLSE-----GFETSRFLFFVPFFLLQGGG-MDLSKVGEKILSSVRSARSLGLL--PTTSDRPEVPARAVAAAAVARA

Query:  LAGLPPHQRFSISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLV
        LAGLP  QR SISS++ EL+SIYG+R    ++EELEE FYEEDFDPVRH+LE+VP +E++L Y EKQAT RL QLDKVAE LS HVMEHHEVMVKGM+LV
Subjt:  LAGLPPHQRFSISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLV

Query:  RELEKDLKIANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        RELEKDLKIANVIC+NG+R+LTSSM E SRDLIV+++SKKKQALL
Subjt:  RELEKDLKIANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

AT2G27900.2 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

1.2e-84

72.24

Show/hide

Query:  MQPNP-FPFGSVLGNPLAFD--GDLSE-----GFETSRFLFFVPFFLLQGGG-MDLSKVGEKILSSVRSARSLGLL--PTTSDRPEVPARAVAAAAVARA
        MQPN  FPFGSVLGNP  F+  GDL+E      FE+SR  F +PF L QG G MDLSKVGEK LSSV+SA SLGLL  P+ SDRPE+PARA AAAAVARA
Subjt:  MQPNP-FPFGSVLGNPLAFD--GDLSE-----GFETSRFLFFVPFFLLQGGG-MDLSKVGEKILSSVRSARSLGLL--PTTSDRPEVPARAVAAAAVARA

Query:  LAGLPPHQRFSISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLV
        LAGLP  QR SISS++ EL+SIYG+R    ++EELEE FYEEDFDPVRH+LE+VP +E++L Y EKQAT RL QLDKVAE LS HVMEHHEVMVKGM+LV
Subjt:  LAGLPPHQRFSISSSSEELSSIYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLV

Query:  RELEKDLKIANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL
        RELEKDLKIANVIC+NG+R+LTSSM E SRDLIV+++SKKKQALL
Subjt:  RELEKDLKIANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGCCAAATCCGTTTCCATTTGGCAGTGTTCTTGGAAACCCTCTGGCGTTCGATGGTGATTTGAGCGAAGGATTCGAGACTTCCAGGTTTCTCTTCTTTGTTCCGTT
TTTTCTGCTGCAAGGAGGTGGAATGGACTTGTCCAAGGTTGGGGAGAAGATTTTGAGCTCGGTGAGGTCAGCTAGATCGCTTGGACTTCTTCCTACCACTTCTGATCGTC
CGGAGGTTCCAGCACGTGCTGTGGCTGCGGCAGCTGTTGCTCGTGCGCTTGCAGGATTGCCTCCTCATCAGAGATTTAGTATCTCATCTAGCTCTGAAGAACTGAGCTCA
ATATATGGAAGTAGAAATCATGGTTACGAAATAGAGGAACTAGAGGAAGTTTTCTATGAAGAGGACTTTGACCCAGTTAGGCATGTACTAGAGCATGTTCCATCGGAAGA
AAATGATCTGGAATATTTGGAGAAACAGGCTACTAAGAGATTAGCTCAACTTGATAAAGTGGCTGAGCATTTATCTCGCCATGTAATGGAGCATCATGAAGTGATGGTGA
AAGGGATGCATTTGGTCAGGGAATTGGAAAAAGACTTGAAAATTGCGAATGTCATCTGCAGGAATGGGAAGAGACACCTAACTTCGTCAATGCTTGAAGTTTCTAGAGAT
CTCATTGTGAACTCTAATTCCAAGAAGAAACAAGCACTTCTGATTCCTAATGGCTCCTTCAAAAACGAGGTTGGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MQPNPFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFSISSSSEELSS
IYGSRNHGYEIEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAEHLSRHVMEHHEVMVKGMHLVRELEKDLKIANVICRNGKRHLTSSMLEVSRD
LIVNSNSKKKQALLIPNGSFKNEVG

Lag0026040 (gene) of Sponge gourd (AG-4) v1 genome