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Lag0026042 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026042
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:27720603..27721121
RNA-Seq ExpressionLag0026042
SyntenyLag0026042
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]5.5e-4152.3Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSIA+P  N+VHLYV V  VD  A NL  +      + + +D+EPE   PP  H+ E++V  N + E RT+TDDEFE +DFD  E+++PS TF  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD++  HDPI+ P+V +N  LY G+IC++K+++QH+VKCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]1.2e-3851.72Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVP--PHDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSIA+   N+VHLYV V  VD  A NL  +      + + +D+EPE   P   H+ E++V  N + E RT+TDDEFE +DFD  E+++PS TF  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVP--PHDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD +  HDPI+ P+V +N  LY G+IC++K++LQH+VKCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.0e-3951.15Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSI +P  N+VHLYV V  VD  A NL  +      + + +D+EPE   PP  H+ E++V  N + E RT+TDDEFE +DFD  E+++PS  F  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD +  HDPI+ P+V +N  LY G+IC++K++LQH++KCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.4e-4152.87Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSIA+P  N+VHLYV V  VD  A NL  +      + + +D+EPE   PP  H+ E++V  N + E RT+TDDEFE +DFD  E+++PS TF  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD +  HDPI+ P+V +N  LY G+IC++K++LQH+VKCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

XP_022143566.1 uncharacterized protein LOC111013435 [Momordica charantia]3.0e-3950Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP----HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFN
        + LMF+IA+    LV L+V VR++ ++     E+ SQC++ S+CLD+EPELVVPP     +  D++ D+ F ELRT TDDEF+ LD +  EHDIPS TFN
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP----HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFN

Query:  QLEMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
         +  D+V+  A HD I+ P+  EN++LYK  +C DK+ +QH+VKCFA++ H PY++VES P+   IRCKKW+D CK
Subjt:  QLEMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein2.7e-4152.3Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSIA+P  N+VHLYV V  VD  A NL  +      + + +D+EPE   PP  H+ E++V  N + E RT+TDDEFE +DFD  E+++PS TF  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD++  HDPI+ P+V +N  LY G+IC++K+++QH+VKCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

A0A5A7T1X8 SWIM-type domain-containing protein5.6e-3951.72Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVP--PHDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSIA+   N+VHLYV V  VD  A NL  +      + + +D+EPE   P   H+ E++V  N + E RT+TDDEFE +DFD  E+++PS TF  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVP--PHDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD +  HDPI+ P+V +N  LY G+IC++K++LQH+VKCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein4.6e-4152.87Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSIA+P  N+VHLYV V  VD  A NL  +      + + +D+EPE   PP  H+ E++V  N + E RT+TDDEFE +DFD  E+++PS TF  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD +  HDPI+ P+V +N  LY G+IC++K++LQH+VKCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein5.1e-4051.15Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL
        M  MFSI +P  N+VHLYV V  VD  A NL  +      + + +D+EPE   PP  H+ E++V  N + E RT+TDDEFE +DFD  E+++PS  F  L
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP--HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQL

Query:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
        +M+ VD +  HDPI+ P+V +N  LY G+IC++K++LQH++KCFAIK HAPYEVVESTPT   IRCKK  + CK
Subjt:  EMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

A0A6J1CQN0 uncharacterized protein LOC1110134351.5e-3950Show/hide
Query:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP----HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFN
        + LMF+IA+    LV L+V VR++ ++     E+ SQC++ S+CLD+EPELVVPP     +  D++ D+ F ELRT TDDEF+ LD +  EHDIPS TFN
Subjt:  MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPP----HDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFN

Query:  QLEMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK
         +  D+V+  A HD I+ P+  EN++LYK  +C DK+ +QH+VKCFA++ H PY++VES P+   IRCKKW+D CK
Subjt:  QLEMDVVDSVAGHDPIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAATGTTCTCAATTGCGATGCCTATATCAAATTTAGTGCATTTATATGTCATTGTGAGGAGTGTAGACATGGATGCACATAATTTAAGAGAAGACTCTAGCCA
ATGTGTTGACTTGAGTAAATGTCTTGATATCGAGCCTGAATTAGTGGTGCCACCACATGATGGTGAAGATGTGGTGGTAGATAATAGTTTCAAAGAGCTAAGAACAAAGA
CAGACGATGAATTTGAACATTTGGACTTTGATAGTCATGAACATGATATCCCCTCAGAAACATTCAATCAACTTGAGATGGATGTTGTAGATAGTGTTGCAGGACATGAT
CCCATTGTAGCTCCTGTGGTTGTTGAAAATAATTTATTATATAAGGGGTTAATATGCCAAGACAAACAAATTCTTCAGCATTTGGTAAAGTGTTTTGCTATTAAGTGTCA
TGCACCATACGAAGTTGTTGAGTCAACCCCAACGATACAGGCAATACGATGTAAAAAGTGGAAGGATGATTGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAATGTTCTCAATTGCGATGCCTATATCAAATTTAGTGCATTTATATGTCATTGTGAGGAGTGTAGACATGGATGCACATAATTTAAGAGAAGACTCTAGCCA
ATGTGTTGACTTGAGTAAATGTCTTGATATCGAGCCTGAATTAGTGGTGCCACCACATGATGGTGAAGATGTGGTGGTAGATAATAGTTTCAAAGAGCTAAGAACAAAGA
CAGACGATGAATTTGAACATTTGGACTTTGATAGTCATGAACATGATATCCCCTCAGAAACATTCAATCAACTTGAGATGGATGTTGTAGATAGTGTTGCAGGACATGAT
CCCATTGTAGCTCCTGTGGTTGTTGAAAATAATTTATTATATAAGGGGTTAATATGCCAAGACAAACAAATTCTTCAGCATTTGGTAAAGTGTTTTGCTATTAAGTGTCA
TGCACCATACGAAGTTGTTGAGTCAACCCCAACGATACAGGCAATACGATGTAAAAAGTGGAAGGATGATTGCAAATGA
Protein sequenceShow/hide protein sequence
MKLMFSIAMPISNLVHLYVIVRSVDMDAHNLREDSSQCVDLSKCLDIEPELVVPPHDGEDVVVDNSFKELRTKTDDEFEHLDFDSHEHDIPSETFNQLEMDVVDSVAGHD
PIVAPVVVENNLLYKGLICQDKQILQHLVKCFAIKCHAPYEVVESTPTIQAIRCKKWKDDCK