; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026047 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026047
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:27823927..27824919
RNA-Seq ExpressionLag0026047
SyntenyLag0026047
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]8.2e-5145.86Show/hide
Query:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE
        W ER K P+ +++ + R       HGH T+DC  L++E+E LIR GYLKE+V     ++P  ++   G     P  EI+TI+GGP   +SGRKRKA  RE
Subjt:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE

Query:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM
        A+   +  E                   IAN +VHR+L+DGGS A +LS  A++AM L    LK S  PLVG GGE+V PEG  E  VTF  G +SVTKM
Subjt:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM

Query:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR
        ++ LVV +  +YNAILGRP +H LRA+ STYHQ +KFPT  GVG + GEQ+  REC +T ++   R
Subjt:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]3.3e-5241.61Show/hide
Query:  IEAIIRE-GYLKDFVWNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGP
        +E ++ E  Y +   W ER   P +S++ +GR      DH H T+DC  L+ E++ LI+ GYLKE+V     + P  ++ G   D   P  EI+TI+GGP
Subjt:  IEAIIRE-GYLKDFVWNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGP

Query:  SRGDSGRKRKAAAREAQLEP-----------------KYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLT
           + GRKRKA+ RE +                    ++ E E   + H HND LV+TL IANA+VHRIL+DGGS A ++S  A++AM L     K S  
Subjt:  SRGDSGRKRKAAAREAQLEP-----------------KYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLT

Query:  PLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR
         LV   GE+V PEG  EL+VTF  G +S+T +++FLV+ +  +YNAILGRP +H L+A+ STYHQ + FPT  G+G +  EQ+  REC +T +K   R
Subjt:  PLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]1.4e-5044.36Show/hide
Query:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE
        W ER K P  S++ +G+      DHGH T+DC  L++E+E LIR GYLKE+V     + P  ++ G   D + P  EI+TI+                 E
Subjt:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE

Query:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM
           + ++ E E   + H HNDALV+TL IANA+VHRIL+DGGS   ++S  A++AM L    LK S  PLVG GGE+V PEG  EL V F  G +S+ KM
Subjt:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM

Query:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR
        ++FLVV +  +YN ILGRP +H L+ + STYHQ +KFPT +G+G + GEQ+  REC    +K   R
Subjt:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]7.2e-5546.88Show/hide
Query:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLEP-----------------K
        DHGH T+DC  L++E+E LIR GYLKE+V  +  K    SE     D   P  EIQTI GGP+  + G+KRKA+ +EA+  P                 K
Subjt:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLEP-----------------K

Query:  YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVV
        + E E   + H HNDALV+TL I N +VHRIL+DGGS  G++S  A++AM L    LK +L PLVG GGE+V  +   +L VTF  G +++TK++ FLVV
Subjt:  YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVV

Query:  GFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELK
         +  +YNAILGRP +H L+A+ STYH+ LKFPT+ G+  V GEQ+   EC +T L+
Subjt:  GFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELK

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]9.1e-5044.44Show/hide
Query:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGND----RGKKPTRSEQGRGR---DGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLEPK----------
        DHGH T +C +L+++IE+L+R+G L+E+V N     + ++P  S++ +G+   D D+   ++  I GGP+ GDS + RK  AR+A+ EP           
Subjt:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGND----RGKKPTRSEQGRGR---DGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLEPK----------

Query:  -----------YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQ
                   + E +  G+HH H DALVVTL +AN R+HRILID GS A +L  + F  M L R +LK   TPL G  G  V PEG  EL V+F +   
Subjt:  -----------YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQ

Query:  SVTKMINFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFREC
         VT M+NF+VV    +YNA+LGRP L+ L+A  S YH  LKFPTE GVG+V GEQK  REC
Subjt:  SVTKMINFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFREC

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141474.0e-5145.86Show/hide
Query:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE
        W ER K P+ +++ + R       HGH T+DC  L++E+E LIR GYLKE+V     ++P  ++   G     P  EI+TI+GGP   +SGRKRKA  RE
Subjt:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE

Query:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM
        A+   +  E                   IAN +VHR+L+DGGS A +LS  A++AM L    LK S  PLVG GGE+V PEG  E  VTF  G +SVTKM
Subjt:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM

Query:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR
        ++ LVV +  +YNAILGRP +H LRA+ STYHQ +KFPT  GVG + GEQ+  REC +T ++   R
Subjt:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR

A0A6J1D8C9 uncharacterized protein LOC1110183001.6e-5241.61Show/hide
Query:  IEAIIRE-GYLKDFVWNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGP
        +E ++ E  Y +   W ER   P +S++ +GR      DH H T+DC  L+ E++ LI+ GYLKE+V     + P  ++ G   D   P  EI+TI+GGP
Subjt:  IEAIIRE-GYLKDFVWNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGP

Query:  SRGDSGRKRKAAAREAQLEP-----------------KYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLT
           + GRKRKA+ RE +                    ++ E E   + H HND LV+TL IANA+VHRIL+DGGS A ++S  A++AM L     K S  
Subjt:  SRGDSGRKRKAAAREAQLEP-----------------KYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLT

Query:  PLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR
         LV   GE+V PEG  EL+VTF  G +S+T +++FLV+ +  +YNAILGRP +H L+A+ STYHQ + FPT  G+G +  EQ+  REC +T +K   R
Subjt:  PLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR

A0A6J1DP33 uncharacterized protein LOC1110228866.8e-5144.36Show/hide
Query:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE
        W ER K P  S++ +G+      DHGH T+DC  L++E+E LIR GYLKE+V     + P  ++ G   D + P  EI+TI+                 E
Subjt:  WNERGKKPTRSEQGRGR----GGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAARE

Query:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM
           + ++ E E   + H HNDALV+TL IANA+VHRIL+DGGS   ++S  A++AM L    LK S  PLVG GGE+V PEG  EL V F  G +S+ KM
Subjt:  AQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKM

Query:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR
        ++FLVV +  +YN ILGRP +H L+ + STYHQ +KFPT +G+G + GEQ+  REC    +K   R
Subjt:  INFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR

A0A6J1DQL9 uncharacterized protein LOC1110229052.4e-4844.62Show/hide
Query:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLE-----------------PK
        DHGH T+DC  L++E+E LIR GYLKE+V + +  +        G +   P  EIQTI+GGP   +SGRK K   REA+                    +
Subjt:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLE-----------------PK

Query:  YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVV
        + + E   + H HNDALV+TL IAN +VHRIL+DGG+ A ++S  A++ M +    LK + TPLV L G   SP       VTF  G +SVTKM+ FLVV
Subjt:  YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVV

Query:  GFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR
         +  +YNAILGR  +H L+A+ STYHQ +KFPT  GVG + GEQ+  REC +T +K   R
Subjt:  GFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRR

A0A6J1DV51 uncharacterized protein LOC1110246623.5e-5546.88Show/hide
Query:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLEP-----------------K
        DHGH T+DC  L++E+E LIR GYLKE+V  +  K    SE     D   P  EIQTI GGP+  + G+KRKA+ +EA+  P                 K
Subjt:  DHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTILGGPSRGDSGRKRKAAAREAQLEP-----------------K

Query:  YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVV
        + E E   + H HNDALV+TL I N +VHRIL+DGGS  G++S  A++AM L    LK +L PLVG GGE+V  +   +L VTF  G +++TK++ FLVV
Subjt:  YQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFREGLQSVTKMINFLVV

Query:  GFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELK
         +  +YNAILGRP +H L+A+ STYH+ LKFPT+ G+  V GEQ+   EC +T L+
Subjt:  GFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCATGGAGATCACGGTCACACAACTAGAGAATGCATACAATTATGGGACGAGATAGAGGCCATAATCAGAGAGGGTTATCTGAAGGATTTTGTTTGGAACGAAAG
AGGCAAAAAACCAACACGATCAGAACAAGGTCGAGGCCGAGGTGGAGATCACGGTCACACAACCAGAGATTGCATACAGTTACGGGACGAGATAGAGACCCTAATTAGAG
AGGGTTATCTAAAGGAATTTGTTGGGAACGACAGAGGCAAAAAACCAACACGATCAGAACAAGGCCGAGGTCGAGATGGCGATGACCCCCCTCTAGAGATTCAAACCATC
TTAGGAGGGCCTTCCAGAGGGGATTCTGGTAGGAAGCGCAAAGCGGCTGCCCGGGAGGCTCAACTAGAGCCAAAGTACCAAGAAAGGGAGGTTGCAGGAATCCACCATCT
GCACAATGATGCATTGGTAGTAACCCTAAATATCGCCAATGCAAGGGTTCACCGAATCCTAATTGATGGAGGAAGCTTTGCGGGTGTTCTCTCTACAGCAGCGTTCGAGG
CCATGAGGTTACGGAGGGACCGTTTGAAGCTGAGCCTCACACCATTGGTTGGGTTGGGGGGAGAAAAAGTGAGCCCAGAGGGAAGCAACGAGCTGTCAGTAACCTTTAGA
GAAGGGTTGCAGTCAGTTACAAAGATGATCAACTTCCTGGTGGTAGGTTTCATCTTGGCCTATAACGCCATACTAGGAAGACCAGCTTTGCACGAACTCAGAGCGGTTGC
GTCAACTTACCATCAAGTCCTGAAGTTTCCAACAGAAAATGGTGTAGGAATAGTGCATGGCGAGCAGAAGACGTTCAGAGAATGCAACTTCACAGAGCTCAAAACACGTA
GAAGGAAAAACTTGAGCATCTCTCAGCTCGGGAAATGCCCGAGGCCGAGAATTCCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCATGGAGATCACGGTCACACAACTAGAGAATGCATACAATTATGGGACGAGATAGAGGCCATAATCAGAGAGGGTTATCTGAAGGATTTTGTTTGGAACGAAAG
AGGCAAAAAACCAACACGATCAGAACAAGGTCGAGGCCGAGGTGGAGATCACGGTCACACAACCAGAGATTGCATACAGTTACGGGACGAGATAGAGACCCTAATTAGAG
AGGGTTATCTAAAGGAATTTGTTGGGAACGACAGAGGCAAAAAACCAACACGATCAGAACAAGGCCGAGGTCGAGATGGCGATGACCCCCCTCTAGAGATTCAAACCATC
TTAGGAGGGCCTTCCAGAGGGGATTCTGGTAGGAAGCGCAAAGCGGCTGCCCGGGAGGCTCAACTAGAGCCAAAGTACCAAGAAAGGGAGGTTGCAGGAATCCACCATCT
GCACAATGATGCATTGGTAGTAACCCTAAATATCGCCAATGCAAGGGTTCACCGAATCCTAATTGATGGAGGAAGCTTTGCGGGTGTTCTCTCTACAGCAGCGTTCGAGG
CCATGAGGTTACGGAGGGACCGTTTGAAGCTGAGCCTCACACCATTGGTTGGGTTGGGGGGAGAAAAAGTGAGCCCAGAGGGAAGCAACGAGCTGTCAGTAACCTTTAGA
GAAGGGTTGCAGTCAGTTACAAAGATGATCAACTTCCTGGTGGTAGGTTTCATCTTGGCCTATAACGCCATACTAGGAAGACCAGCTTTGCACGAACTCAGAGCGGTTGC
GTCAACTTACCATCAAGTCCTGAAGTTTCCAACAGAAAATGGTGTAGGAATAGTGCATGGCGAGCAGAAGACGTTCAGAGAATGCAACTTCACAGAGCTCAAAACACGTA
GAAGGAAAAACTTGAGCATCTCTCAGCTCGGGAAATGCCCGAGGCCGAGAATTCCTCATTGA
Protein sequenceShow/hide protein sequence
MFHGDHGHTTRECIQLWDEIEAIIREGYLKDFVWNERGKKPTRSEQGRGRGGDHGHTTRDCIQLRDEIETLIREGYLKEFVGNDRGKKPTRSEQGRGRDGDDPPLEIQTI
LGGPSRGDSGRKRKAAAREAQLEPKYQEREVAGIHHLHNDALVVTLNIANARVHRILIDGGSFAGVLSTAAFEAMRLRRDRLKLSLTPLVGLGGEKVSPEGSNELSVTFR
EGLQSVTKMINFLVVGFILAYNAILGRPALHELRAVASTYHQVLKFPTENGVGIVHGEQKTFRECNFTELKTRRRKNLSISQLGKCPRPRIPH