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Lag0026062 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026062
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description1-deoxy-D-xylulose 5-phosphate synthase family protein
Genome locationchr10:28316609..28316992
RNA-Seq ExpressionLag0026062
SyntenyLag0026062
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCI09484.1 hypothetical protein [Trifolium medium]2.0e-0842.27Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPTIDLPLIGKLQQTISKGKT
        MPTTHN T++  R++LL+CI+ G +I+VG II   I+ C  K++  G L+F  LIT+LC++  + V G+DE    F+PT       K  +T+ KG T
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPTIDLPLIGKLQQTISKGKT

PIN02048.1 hypothetical protein CDL12_25440 [Handroanthus impetiginosus]7.8e-0842.31Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTID
        +PT+H+  ++ DR +LLYCIM G  I +G II D I+         L+F SLIT+LC R  +   K+EE  F +  ID
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTID

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.8e-0836.08Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP
        +PTTH  T+S DR++LL+ ++ G  I+VG +I   I AC  ++ G LFF SLIT+LC+  +     +EE+      ID   + ++ Q      T+ P
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.9e-0938.14Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP
        +PTTH  T+S DR++LLY ++ G  I+VG +I   I AC  +++G LFF SLITQLC+  +     +EE+      ID   + ++ Q      T+ P
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]9.8e-1135.85Show/hide
Query:  PTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDE---ERHFFKPTIDLPLIGKLQQTISKGKTKPPH
        PTTH+++ISV++++LLYC++ G  I+VG ++   IL C ++R GKLFF SLI +L  +  +    D+   +    K TID+  + KL++   +G+  P  
Subjt:  PTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDE---ERHFFKPTIDLPLIGKLQQTISKGKTKPPH

Query:  LRPLHQ
         R + +
Subjt:  LRPLHQ

TrEMBL top hitse value%identityAlignment
A0A2G9G9R6 Uncharacterized protein3.8e-0842.31Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTID
        +PT+H+  ++ DR +LLYCIM G  I +G II D I+         L+F SLIT+LC R  +   K+EE  F +  ID
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTID

A0A2P5AGA5 Uncharacterized protein (Fragment)3.8e-0836.08Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP
        +PTTH  T+S DR++LL+ ++ G  I+VG +I   I AC  ++ G LFF SLIT+LC+  +     +EE+      ID   + ++ Q      T+ P
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP

A0A2P5BCG4 Uncharacterized protein (Fragment)3.8e-0836.08Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP
        +PTTH  T+S DR++LL+ ++ G  I+VG +I   I AC  ++ G LFF SLIT+LC+  +     +EE+      ID   + ++ Q      T+ P
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP

A0A2P5CEY2 Uncharacterized protein9.0e-1038.14Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP
        +PTTH  T+S DR++LLY ++ G  I+VG +I   I AC  +++G LFF SLITQLC+  +     +EE+      ID   + ++ Q      T+ P
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPP

A0A392PCH7 Uncharacterized protein9.9e-0942.27Show/hide
Query:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPTIDLPLIGKLQQTISKGKT
        MPTTHN T++  R++LL+CI+ G +I+VG II   I+ C  K++  G L+F  LIT+LC++  + V G+DE    F+PT       K  +T+ KG T
Subjt:  MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPTIDLPLIGKLQQTISKGKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCCACAACAACACGATCTCAGTGGATAGAGTGATGTTACTCTATTGCATTATGAAAGGGTTGGAAATCAGCGTTGGGAGCATTATCAGGGATGGGATTTT
AGCCTGTGGGAGAAAAAGAGCAGGTAAGCTTTTCTTTAGATCACTCATCACCCAGCTTTGCCAAAGGGTGAAGATCGTTCCAGGCAAGGATGAGGAGCGTCATTTCTTCA
AGCCAACCATTGACCTGCCCTTGATCGGGAAGCTCCAGCAGACAATATCCAAAGGAAAGACAAAGCCTCCACATCTCAGGCCACTCCACCAGCAGGGCCGAGCATGGCTT
CTTCATCCCAGCACACTCCTTTCACAGGGCCTTCGCCATCATCAGAAGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCCACAACAACACGATCTCAGTGGATAGAGTGATGTTACTCTATTGCATTATGAAAGGGTTGGAAATCAGCGTTGGGAGCATTATCAGGGATGGGATTTT
AGCCTGTGGGAGAAAAAGAGCAGGTAAGCTTTTCTTTAGATCACTCATCACCCAGCTTTGCCAAAGGGTGAAGATCGTTCCAGGCAAGGATGAGGAGCGTCATTTCTTCA
AGCCAACCATTGACCTGCCCTTGATCGGGAAGCTCCAGCAGACAATATCCAAAGGAAAGACAAAGCCTCCACATCTCAGGCCACTCCACCAGCAGGGCCGAGCATGGCTT
CTTCATCCCAGCACACTCCTTTCACAGGGCCTTCGCCATCATCAGAAGCCCTAG
Protein sequenceShow/hide protein sequence
MPTTHNNTISVDRVMLLYCIMKGLEISVGSIIRDGILACGRKRAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQTISKGKTKPPHLRPLHQQGRAWL
LHPSTLLSQGLRHHQKP