| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU17915.1 hypothetical protein TSUD_330400, partial [Trifolium subterraneum] | 4.5e-82 | 32.13 | Show/hide |
Query: IKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQEY
+KLD+ N+ LW+++VL +++ +L+G++ GK P+ I S K NPE++ W A DQ L+GWL NSMT IATQ++ E + LW+
Subjt: IKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQEY
Query: YGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQALK
G +RSQ Y + TRKG M M +Y MK D L++ G P+ I GLD EY P+V + +Q + W ++Q +LL+FE R ++L L
Subjt: YGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQALK
Query: TNISVNQASANLAEVLLTSDTQKSHYQTNNQ-QNRNFSSNFSNQNRGHF----------------------------SNRGNRYREKRSNEVYMVGKLEN
TN+++N A+AN+A S+ + + + +NN + NF + RG SN + ++ S+ V++ +
Subjt: TNISVNQASANLAEVLLTSDTQKSHYQTNNQ-QNRNFSSNFSNQNRGHF----------------------------SNRGNRYREKRSNEVYMVGKLEN
Query: GLYRLLEEPQASTDSQMEIKGLEDASIVKIQRRL--DDGRQVNLVSYVLTTCK---------------------MDMWHKRLGHPSFKILSQIL------
Y + AS + +D + + L +G ++ +V+ T + + WH++LGHP+ K + +++
Subjt: GLYRLLEEPQASTDSQMEIKGLEDASIVKIQRRL--DDGRQVNLVSYVLTTCK---------------------MDMWHKRLGHPSFKILSQIL------
Query: ----------------------------------------------------QLCKVPIKSNGKPDFCEACKLEHGIDIQISCPYASAQNGRIERKHRHI
++ + G+ + +E GI ++SCPY S QNGR ERKHRHI
Subjt: ----------------------------------------------------QLCKVPIKSNGKPDFCEACKLEHGIDIQISCPYASAQNGRIERKHRHI
Query: VETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKT
E GL LLAQAKMPL++WW+AF TAV+LINRLPS V +SP+ LL ++PDY LK FG ACYPCL+PY K +FHT KCVFLG +N+HKGY+C++
Subjt: VETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKT
Query: GLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTT
G ++ISRHV FNE FP+ + F++ P+ T T
Subjt: GLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTT
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| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 8.5e-81 | 30.65 | Show/hide |
Query: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
+S+KLD+ N+ LW+++VL V++ KL+G++ G P+ I S K N + W A DQ L+GW+ NSMT EIATQ++ E +K LWD Q
Subjt: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
Query: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQA
G +RSQ Y + RKG M M +Y MK D L++ G P+ I GLD EY P+V + +Q ++W ++Q +LL+FE R ++L
Subjt: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQA
Query: LKTNISVNQASANLA------------------------------------EVLLTS------------------------DTQKSHYQTNNQQN--RNF
L TN+++N A+AN+A +V S D Q SH QN ++
Subjt: LKTNISVNQASANLA------------------------------------EVLLTS------------------------DTQKSHYQTNNQQN--RNF
Query: SSNFSNQNRGHFSNRGNRYR---EKRSNEVYMVG------------------KLENGLY------RLLEEPQASTDSQMEIKGLEDASIVK--------I
F + H +++ +++ E +VG L + LY LL + + D+ + ++ E+ VK +
Subjt: SSNFSNQNRGHFSNRGNRYR---EKRSNEVYMVG------------------KLENGLY------RLLEEPQASTDSQMEIKGLEDASIVK--------I
Query: QRRLDD------GRQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK---------------------------------
+ L D G + N ++V + WH+RLGHP+ K+L ++L+ CKV + + FCEAC+
Subjt: QRRLDD------GRQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK---------------------------------
Query: --------------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETG
+E GI ++SCPY S QNGR ERKHRHI E G
Subjt: --------------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETG
Query: LALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIY
L LLAQA+MPLH+WW+AF TAV+LINRLPS V +SP+ L+ ++PDYK LKTFG ACYPCL+PY K ++HT +CVFLG +N+HKGY+C++ G I+
Subjt: LALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIY
Query: ISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINP
ISRHV FNE FP+ + F++ P+ TT + +PST P
Subjt: ISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINP
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| GAU21262.1 hypothetical protein TSUD_286720 [Trifolium subterraneum] | 9.0e-83 | 34.59 | Show/hide |
Query: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
+S+KLD+ N+ LW+++VL +++ +L+G++ G P+ + + K NPEY+ W+A DQ L+GWL NSM +IATQ++ E +K LWD Q
Subjt: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
Query: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQ-
G +RS+ Y + TRKG M M +Y MK D L+M G P+ + GLD E+ P+V + +Q N++W ++Q +LL+FE R ++L
Subjt: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQ-
Query: --ALKTNISVNQASANLAEVLLTSDTQK-----------SHYQTNNQQN-----------RNFSSNFSNQNRGHFSNRGNRYREKRSNEVYMVGKLE---
+L N S N AS N L T++ + Y NN+ N +++ F + H +++ + ++ GKL
Subjt: --ALKTNISVNQASANLAEVLLTSDTQK-----------SHYQTNNQQN-----------RNFSSNFSNQNRGHFSNRGNRYREKRSNEVYMVGKLE---
Query: -NGLYRLLEEPQASTDSQM--EIKGLEDASIVKIQRRLDDGRQVNLV---SYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACKLE
N +EP S + L ++I +DD + + T K + F +++Q G+ + +E
Subjt: -NGLYRLLEEPQASTDSQM--EIKGLEDASIVKIQRRLDDGRQVNLV---SYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACKLE
Query: HGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQK
GI ++SCPY S QNGR ERKHRH+ E G+ LLAQAKMPLH+WW+AF T+V+LINRLPSSV +SP+ LL ++PDY LK FG ACYPCL+PY K
Subjt: HGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQK
Query: FEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS-----TINPHIHPT
+FH KCVFLG +N+HKGY+C++ I++SR V FNE FP+ + F+ + P+ T T ++ + PS T + I PT
Subjt: FEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS-----TINPHIHPT
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 2.9e-81 | 29.58 | Show/hide |
Query: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
+S+KLD+ N+ LW+++VL +++ KL+G++ G T P+ + K NP++ W+A DQ L+GWL NSM +IATQ++ E +K LWD Q
Subjt: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
Query: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDR---
G ++S+ Y + TRKG M M EY MK D L++ G P+ + GLD EY P+V + +Q N++W ++Q +LL+FE R D+
Subjt: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDR---
Query: LQALKTNISVNQASANLAEVLLTSDTQKSHYQTNN--------------------------------------QQNRNFSS-------------------
L N S N AN E + +++ +N RN+S+
Subjt: LQALKTNISVNQASANLAEVLLTSDTQKSHYQTNN--------------------------------------QQNRNFSS-------------------
Query: -------NFSNQNRGHFSNRGNRYREKRSNEVYMVG-------------KLEN-GLYRLLEEPQASTDSQMEIKGLEDASIV------------------
+ +N + H +++ + E MVG KL N L+ +L PQ + + K D +I+
Subjt: -------NFSNQNRGHFSNRGNRYREKRSNEVYMVG-------------KLEN-GLYRLLEEPQASTDSQMEIKGLEDASIV------------------
Query: KIQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK------------------------------------
++ RL DG Q++ + + WH++LGHP+ K+L ++L+ C V I + + FCEAC+
Subjt: KIQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK------------------------------------
Query: -----------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETGLAL
+E GI ++SCPY S QNGR ERKHRH+ E GL L
Subjt: -----------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETGLAL
Query: LAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISR
LAQAKMPL +WW+AF TAV+LINRLPSSV +SP+ L+ ++PDY LK FG ACYPCL+PY K +FHT +CVF+G +N+HKGY+C++ G I++SR
Subjt: LAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISR
Query: HVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS
HV FNE FP+ F+ + + P+ T T S + LP+
Subjt: HVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 2.9e-81 | 30.22 | Show/hide |
Query: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
+S+KLD+ N+ LWQ++VL +++ +L+G++ GK P+ I S K NPE++ W A DQ L+GWL NSMT IATQ++ E + LWD Q
Subjt: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
Query: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQA
G +RSQ Y + TRKG M M +Y MK D L++ G P+ I GLD EY P+V + +Q ++W ++Q +LL+FE R ++L +
Subjt: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQA
Query: LKTNISVNQASANLAEVLLTSDTQKSHYQTNNQ---QNRNF-SSNF---------------------------------------------SNQNRG---
L TN+++N A+AN+A+ SD + + + +NN N N+ SNF +N +G
Subjt: LKTNISVNQASANLAEVLLTSDTQKSHYQTNNQ---QNRNF-SSNF---------------------------------------------SNQNRG---
Query: -------------------------HFSNRGNRYREKRSNEVYMVG------------------KLENGLY------RLLEEPQASTDSQMEIKGLEDAS
H +++ E +VG L + LY LL + + D+ + ++ E+
Subjt: -------------------------HFSNRGNRYREKRSNEVYMVG------------------KLENGLY------RLLEEPQASTDSQMEIKGLEDAS
Query: IVK--------IQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK--------------------------
VK ++ L DG Q++ + WH++LGHP+ K+L +L+ C V + + + FCEAC+
Subjt: IVK--------IQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK--------------------------
Query: ---------------------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKH
+E GI ++SCPY S QNGR ERKH
Subjt: ---------------------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKH
Query: RHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCM
RHI E GL LLAQAKMPL++WW+AF TAV+LINRLPSSV KSP+ LL ++PDY LK FG ACYP L+PY K +FHT +CVFLG +N+HKGY+C+
Subjt: RHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCM
Query: SKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINP-HIHPTPMPSELSSSTGLAS
+ G I+ISRHV FNE FP+ + F++ P+ T T PS+ P H TP+ E++ + +++
Subjt: SKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINP-HIHPTPMPSELSSSTGLAS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 1.4e-81 | 30.22 | Show/hide |
Query: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
+S+KLD+ N+ LWQ++VL +++ +L+G++ GK P+ I S K NPE++ W A DQ L+GWL NSMT IATQ++ E + LWD Q
Subjt: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
Query: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQA
G +RSQ Y + TRKG M M +Y MK D L++ G P+ I GLD EY P+V + +Q ++W ++Q +LL+FE R ++L +
Subjt: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQA
Query: LKTNISVNQASANLAEVLLTSDTQKSHYQTNNQ---QNRNF-SSNF---------------------------------------------SNQNRG---
L TN+++N A+AN+A+ SD + + + +NN N N+ SNF +N +G
Subjt: LKTNISVNQASANLAEVLLTSDTQKSHYQTNNQ---QNRNF-SSNF---------------------------------------------SNQNRG---
Query: -------------------------HFSNRGNRYREKRSNEVYMVG------------------KLENGLY------RLLEEPQASTDSQMEIKGLEDAS
H +++ E +VG L + LY LL + + D+ + ++ E+
Subjt: -------------------------HFSNRGNRYREKRSNEVYMVG------------------KLENGLY------RLLEEPQASTDSQMEIKGLEDAS
Query: IVK--------IQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK--------------------------
VK ++ L DG Q++ + WH++LGHP+ K+L +L+ C V + + + FCEAC+
Subjt: IVK--------IQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK--------------------------
Query: ---------------------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKH
+E GI ++SCPY S QNGR ERKH
Subjt: ---------------------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKH
Query: RHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCM
RHI E GL LLAQAKMPL++WW+AF TAV+LINRLPSSV KSP+ LL ++PDY LK FG ACYP L+PY K +FHT +CVFLG +N+HKGY+C+
Subjt: RHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCM
Query: SKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINP-HIHPTPMPSELSSSTGLAS
+ G I+ISRHV FNE FP+ + F++ P+ T T PS+ P H TP+ E++ + +++
Subjt: SKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINP-HIHPTPMPSELSSSTGLAS
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| A0A2Z6M732 Integrase catalytic domain-containing protein | 4.4e-83 | 34.59 | Show/hide |
Query: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
+S+KLD+ N+ LW+++VL +++ +L+G++ G P+ + + K NPEY+ W+A DQ L+GWL NSM +IATQ++ E +K LWD Q
Subjt: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
Query: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQ-
G +RS+ Y + TRKG M M +Y MK D L+M G P+ + GLD E+ P+V + +Q N++W ++Q +LL+FE R ++L
Subjt: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQ-
Query: --ALKTNISVNQASANLAEVLLTSDTQK-----------SHYQTNNQQN-----------RNFSSNFSNQNRGHFSNRGNRYREKRSNEVYMVGKLE---
+L N S N AS N L T++ + Y NN+ N +++ F + H +++ + ++ GKL
Subjt: --ALKTNISVNQASANLAEVLLTSDTQK-----------SHYQTNNQQN-----------RNFSSNFSNQNRGHFSNRGNRYREKRSNEVYMVGKLE---
Query: -NGLYRLLEEPQASTDSQM--EIKGLEDASIVKIQRRLDDGRQVNLV---SYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACKLE
N +EP S + L ++I +DD + + T K + F +++Q G+ + +E
Subjt: -NGLYRLLEEPQASTDSQM--EIKGLEDASIVKIQRRLDDGRQVNLV---SYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACKLE
Query: HGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQK
GI ++SCPY S QNGR ERKHRH+ E G+ LLAQAKMPLH+WW+AF T+V+LINRLPSSV +SP+ LL ++PDY LK FG ACYPCL+PY K
Subjt: HGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQK
Query: FEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS-----TINPHIHPT
+FH KCVFLG +N+HKGY+C++ I++SR V FNE FP+ + F+ + P+ T T ++ + PS T + I PT
Subjt: FEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS-----TINPHIHPT
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| A0A2Z6P4D5 Integrase catalytic domain-containing protein | 1.4e-81 | 29.58 | Show/hide |
Query: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
+S+KLD+ N+ LW+++VL +++ KL+G++ G T P+ + K NP++ W+A DQ L+GWL NSM +IATQ++ E +K LWD Q
Subjt: MSIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQ
Query: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDR---
G ++S+ Y + TRKG M M EY MK D L++ G P+ + GLD EY P+V + +Q N++W ++Q +LL+FE R D+
Subjt: EYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDR---
Query: LQALKTNISVNQASANLAEVLLTSDTQKSHYQTNN--------------------------------------QQNRNFSS-------------------
L N S N AN E + +++ +N RN+S+
Subjt: LQALKTNISVNQASANLAEVLLTSDTQKSHYQTNN--------------------------------------QQNRNFSS-------------------
Query: -------NFSNQNRGHFSNRGNRYREKRSNEVYMVG-------------KLEN-GLYRLLEEPQASTDSQMEIKGLEDASIV------------------
+ +N + H +++ + E MVG KL N L+ +L PQ + + K D +I+
Subjt: -------NFSNQNRGHFSNRGNRYREKRSNEVYMVG-------------KLEN-GLYRLLEEPQASTDSQMEIKGLEDASIV------------------
Query: KIQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK------------------------------------
++ RL DG Q++ + + WH++LGHP+ K+L ++L+ C V I + + FCEAC+
Subjt: KIQRRLDDG-RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKSNGKPDFCEACK------------------------------------
Query: -----------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETGLAL
+E GI ++SCPY S QNGR ERKHRH+ E GL L
Subjt: -----------------------------------------------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETGLAL
Query: LAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISR
LAQAKMPL +WW+AF TAV+LINRLPSSV +SP+ L+ ++PDY LK FG ACYPCL+PY K +FHT +CVF+G +N+HKGY+C++ G I++SR
Subjt: LAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISR
Query: HVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS
HV FNE FP+ F+ + + P+ T T S + LP+
Subjt: HVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPS
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| A0A803NU85 Uncharacterized protein | 7.5e-83 | 31.88 | Show/hide |
Query: SIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIP----NPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWD
S+KLD+ NF LW+ +V +++ ++LEG+L+G AP + PSE G P NPEY+ WL DQLL+GWL +LW
Subjt: SIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIP----NPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWD
Query: SIQEYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIR-NQNMTWSEIQLELLSFEQRQDR
+++E YG SR+ D R +Q TRKGT M +Y + + + D+L + G P + +S+V +GLD EY IV +I ++ TW ++Q LLSF+ R +R
Subjt: SIQEYYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIR-NQNMTWSEIQLELLSFEQRQDR
Query: LQALKTNIS-VNQASANLAEVLLTSDTQK-----------------SHYQTNNQQNRNFSSNFSNQNRGHFSNRG---------------NRYREK----
L A+ TN +N SAN A+ S+ Q+ +H T N + +F RG+ S NRY E
Subjt: LQALKTNIS-VNQASANLAEVLLTSDTQK-----------------SHYQTNNQQNRNFSSNFSNQNRGHFSNRG---------------NRYREK----
Query: -------------------------------------RSNEVYMVGKLENG-------------------------------LYRLLEEPQAS-------
S+ + K E G L+ +L P S
Subjt: -------------------------------------RSNEVYMVGKLENG-------------------------------LYRLLEEPQAS-------
Query: ---TDSQMEIKGLEDASIVK--------IQRRLDDG-----------------------RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPI
+D+ + ++ D +VK +Q L DG S+V D+WH++LGHPS +L+Q+L+L V +
Subjt: ---TDSQMEIKGLEDASIVK--------IQRRLDDG-----------------------RQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPI
Query: KSNGKPDFCEACK---------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRL
N FC+AC+ L+ GI SCP+ S QNGR ERKHRHIVE GL L+AQA +PL +W DAF TAV+LINRL
Subjt: KSNGKPDFCEACK---------------------------LEHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRL
Query: PSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISRHVCFNEGDFPYQELFM-HHEPEPPI
P++V+ +SP+ L +QPDYK LKTFG AC+PCLR Y KF+FH+ KCV LG + +HKGY+C+S G IYISRHV FNE +FP++ F+ ++ E +
Subjt: PSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYISRHVCFNEGDFPYQELFM-HHEPEPPI
Query: STTTILSWLPLP
W LP
Subjt: STTTILSWLPLP
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| A0A803PM38 Uncharacterized protein | 2.8e-82 | 28.88 | Show/hide |
Query: SIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQE
++KLD+ NF LW+ +V +++ ++L+G+L G P P + + + NP ++ W+ DQLL+GWLY SMT IA +VMG + + +LW +++E
Subjt: SIKLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQE
Query: YYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQAL
+G S+++ D R +Q RKG + M +Y +++ D L + G P +S+V +GLD EY P+V +I + + TW ++Q LLS + + +RL +
Subjt: YYGVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVIRNQ-NMTWSEIQLELLSFEQRQDRLQAL
Query: K-----TNISVNQASANLAEVLLTSDTQKSHYQTNNQQNRNFSSNFSNQNRG-----------------------HFSNR--------------------
T + +N SA+LA + ++ NN+ + + +N++RG H NR
Subjt: K-----TNISVNQASANLAEVLLTSDTQKSHYQTNNQQNRNFSSNFSNQNRG-----------------------HFSNR--------------------
Query: ---------GNR--------------------------------------------------------YREKRSNEVYMVGKLENGLYRLLEEPQASTDS
GNR ++K + +V + GKL++GLY+ + ST S
Subjt: ---------GNR--------------------------------------------------------YREKRSNEVYMVGKLENGLYRLLEEPQASTDS
Query: QMEIKGLEDASIVK--IQRRLDDGRQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKS-NGKPDFCEACKL--------------------
+ + + + ++ + + +L + K D WH+RLGHPS ++L +L K+ +K+ N FC+AC+L
Subjt: QMEIKGLEDASIVK--IQRRLDDGRQVNLVSYVLTTCKMDMWHKRLGHPSFKILSQILQLCKVPIKS-NGKPDFCEACKL--------------------
Query: ---------------------------------------------------------------------------------EHGIDIQISCPYASAQNGR
+HGI Q CP+ S QNGR
Subjt: ---------------------------------------------------------------------------------EHGIDIQISCPYASAQNGR
Query: IERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHK
ERKHRHIVE GL LLAQA +P +WWDAF TAV+LINRLP+ V+ K+PFE+L QQPDYK LK FG +C+PCLR YQ+ KF+FH+ KCV LG ++ HK
Subjt: IERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQKFEFHTEKCVFLGCTNTHK
Query: GYRCMSKTGLIYISRHVCFNEGDFPYQELFMH-HEPEPPIS
GY+C+S TG +YISR V FNE +FP++ F++ ++PE P+S
Subjt: GYRCMSKTGLIYISRHVCFNEGDFPYQELFMH-HEPEPPIS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.7e-12 | 32.81 | Show/hide |
Query: SNGKPDFCEACKLEHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVI--DGKSPFELLKGQQPDYKGLKT
SN FC ++ GI ++ P+ NG ER R I E +++ AK+ W +A TA +LINR+PS + K+P+E+ ++P K L+
Subjt: SNGKPDFCEACKLEHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVI--DGKSPFELLKGQQPDYKGLKT
Query: FGAACYPCLRPYQHQKFEFHTEKCVFLG
FGA Y ++ Q KF+ + K +F+G
Subjt: FGAACYPCLRPYQHQKFEFHTEKCVFLG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-13 | 28.71 | Show/hide |
Query: DFCEACKLEHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYP
+F E C HGI + + P NG ER +R IVE ++L AK+P W +A TA +LINR PS + + P + ++ Y LK FG +
Subjt: DFCEACKLEHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYP
Query: CLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYI-SRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINPHIHPTPMPSELSSSTG
+ Q K + + C+F+G + GYR I SR V F E E+ + + I +++ +PST N P+ S+T
Subjt: CLRPYQHQKFEFHTEKCVFLGCTNTHKGYRCMSKTGLIYI-SRHVCFNEGDFPYQELFMHHEPEPPISTTTILSWLPLPSTINPHIHPTPMPSELSSSTG
Query: LASPPSHTP
S P
Subjt: LASPPSHTP
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 5.1e-04 | 35.29 | Show/hide |
Query: HRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACY
+R I+E ++L + +P DA +TAVH+IN+ PS+ I+ P E+ P Y L+ FG Y
Subjt: HRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.9e-36 | 42.64 | Show/hide |
Query: EHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQ
+HGI S P+ NG ERKHRHIVETGL LL+ A +P +W AF AV+LINRLP+ ++ +SPF+ L G P+Y L+ FG ACYP LRPY
Subjt: EHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQ
Query: KFEFHTEKCVFLGCTNTHKGYRCMS-KTGLIYISRHVCFNEGDFPYQELFMHHEP------------EPPISTTTILSWLPLPSTINPHIHPTPMPS
K + + +CVFLG + T Y C+ +T +YISRHV F+E FP+ P P + T LP PS +PH TP S
Subjt: KFEFHTEKCVFLGCTNTHKGYRCMS-KTGLIYISRHVCFNEGDFPYQELFMHHEP------------EPPISTTTILSWLPLPSTINPHIHPTPMPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.4e-15 | 25.7 | Show/hide |
Query: KLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQEYY
KL TN+L+W V + Y+L G L G T P TI + NP+Y W D+L+ + +++ + V A +W+++++ Y
Subjt: KLDQTNFLLWQNIVLLVLKSYKLEGHLSGKTPAPDMTIIVPPSEEDPLGLKIPNPEYDLWLAADQLLVGWLYNSMTPEIATQVMGHEEAKNLWDSIQEYY
Query: GVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVI--RNQNMTWSEIQLELLSFEQRQDRLQALK
S R L+Q KGT + +Y + + FD L ++G PMD + V L EEY P++ I ++ T +EI LL+ E +
Subjt: GVQSRSQEDYNRLMLQQTRKGTMMMYEYFETMKKYFDNLQMVGFPMDMRSFISHVTAGLDEEYTPIVCVI--RNQNMTWSEIQLELLSFEQRQDRLQALK
Query: TNISVNQASANLAEVLLTSDTQKSHYQTNNQQNRNFSSNFSNQNRGHFS
+ +SA + + + + ++ TNN N N ++ + N+N + S
Subjt: TNISVNQASANLAEVLLTSDTQKSHYQTNNQQNRNFSSNFSNQNRGHFS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.6e-37 | 41.15 | Show/hide |
Query: EHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQ
+HGI S P+ NG ERKHRHIVE GL LL+ A +P +W AF AV+LINRLP+ ++ +SPF+ L GQ P+Y+ LK FG ACYP LRPY
Subjt: EHGIDIQISCPYASAQNGRIERKHRHIVETGLALLAQAKMPLHHWWDAFHTAVHLINRLPSSVIDGKSPFELLKGQQPDYKGLKTFGAACYPCLRPYQHQ
Query: KFEFHTEKCVFLGCTNTHKGYRCMS-KTGLIYISRHVCFNEGDFPY----------QELFMHHEPEPPISTT--TILSWLPLPSTINPHIHPTPMP----
K E +++C F+G + T Y C+ TG +Y SRHV F+E FP+ QE P P TT T LP P + PH+ +P P
Subjt: KFEFHTEKCVFLGCTNTHKGYRCMS-KTGLIYISRHVCFNEGDFPY----------QELFMHHEPEPPISTT--TILSWLPLPSTINPHIHPTPMP----
Query: -----SELSS----STGLASPPSHTP
+++SS S+ ++SP S P
Subjt: -----SELSS----STGLASPPSHTP
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