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Lag0026099 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026099
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr10:29151946..29157918
RNA-Seq ExpressionLag0026099
SyntenyLag0026099
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIM97577.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]1.4e-0934.78Show/hide
Query:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEER-KKPSKPQEVE----------------------------------RVVIVMLSKKSWV
        AN + +RPQG++PS+ E +P ++GK Q QAVTLR+G+ L+E  K+P+K +E E                                  + +  +LSKK  +
Subjt:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEER-KKPSKPQEVE----------------------------------RVVIVMLSKKSWV

Query:  ------------CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDL----------PQS--TPIADRSITYPKGKIEDVLVQ
                     AI++N LP K++D GS TIP +IG    G+   DL          P S    +ADRS+TYPKG IED+LV+
Subjt:  ------------CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDL----------PQS--TPIADRSITYPKGKIEDVLVQ

PIN17626.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]3.1e-0936.42Show/hide
Query:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSKPQEVE-RVVIVMLSKKSWV------------CAILKNGLPSKVEDLGSSTIP
        AN + +R QG++PS+ E +P +E K Q QAVTL +G+ L+E  K+P+KP+  E + +  ++SKK  +             AI++N LP K++D GS T+P
Subjt:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSKPQEVE-RVVIVMLSKKSWV------------CAILKNGLPSKVEDLGSSTIP

Query:  VSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ
         +IG    G+   DL  S                         +ADRS+TYPKG IED+LV+
Subjt:  VSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]4.2e-1435.33Show/hide
Query:  VELAAVVNQVAAKSRVYCGEEHNYEFCPNNPAFVFFAANELKARPQGNIPSDIEHPIREGKKQVQAVTLRSGKPLEERKKPSKPQEVERVVIVMLSKKSW
        V  AAV+NQ AA+S VYCGEEH ++ CP+NPA +F+  N+           D+                     L  R+K       E   +V L+++  
Subjt:  VELAAVVNQVAAKSRVYCGEEHNYEFCPNNPAFVFFAANELKARPQGNIPSDIEHPIREGKKQVQAVTLRSGKPLEERKKPSKPQEVERVVIVMLSKKSW

Query:  VCAILKNGLPSKVEDLGSSTIPVSIGGK---------------------VKLDLPQSTP------IADRSITYPKGKIEDVLVQ
          AILKN +P K +D GS TIP+SIGGK                      KL + ++ P      +ADRS TYP+GKIED+L+Q
Subjt:  VCAILKNGLPSKVEDLGSSTIPVSIGGK---------------------VKLDLPQSTP------IADRSITYPKGKIEDVLVQ

XP_038885994.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120076299 [Benincasa hispida]5.7e-1133.47Show/hide
Query:  VNQVAA-----KSRVYCGEEHNYEFCPNNPAF----------VFFAANELKARPQGNIPSDIEHP-IREGKKQVQAVTLRSGKPLEERK------KPSK-
        VNQV A      S V CG+ H+Y  CP NP            V   A+ELK R  G +PS+ E P    GKKQ  AVTLRSG+ LEER+       PSK 
Subjt:  VNQVAA-----KSRVYCGEEHNYEFCPNNPAF----------VFFAANELKARPQGNIPSDIEHP-IREGKKQVQAVTLRSGKPLEERK------KPSK-

Query:  --------------------PQEVERVVIV------MLSKKSWV-----------C-AILKNGLPSKVEDLGSSTIPVSIGGK-----------------
                            P+ +E++         +L+KK  V           C A++ N LP K +D GS T+P SIGG                  
Subjt:  --------------------PQEVERVVIV------MLSKKSWV-----------C-AILKNGLPSKVEDLGSSTIPVSIGGK-----------------

Query:  ----VKLDLPQSTP------IADRSITYPKGKIEDVLVQ
             KL + ++ P      + D++I YP+GKIEDVLV+
Subjt:  ----VKLDLPQSTP------IADRSITYPKGKIEDVLVQ

XP_038895995.1 uncharacterized protein LOC120084173 [Benincasa hispida]4.4e-1132.26Show/hide
Query:  SRVYCGEEHNYEFCPNNPAFVFFAANELKARPQGNIPSDIEHP-IREGKKQVQAVTLRSGKPLEER---------------------------KKPSKPQ
        S V CG+ H+Y  CP NP       +ELK R  G +PS+ E P    GK+Q   VTLRSG+ LEER                           +  S+P+
Subjt:  SRVYCGEEHNYEFCPNNPAFVFFAANELKARPQGNIPSDIEHP-IREGKKQVQAVTLRSGKPLEER---------------------------KKPSKPQ

Query:  EVERVVIV------MLSKKSWVC------------AILKNGLPSKVEDLGSSTIPVSIGG-----------------------KVKLDLPQSTPI----A
         +E++         +L+KK  V             A++ N LP K +D  S T+P SIGG                       K+ +D  Q T +    A
Subjt:  EVERVVIV------MLSKKSWVC------------AILKNGLPSKVEDLGSSTIPVSIGG-----------------------KVKLDLPQSTPI----A

Query:  DRSITYPKGKIEDVLVQ
        DR+I YP+GKIEDVLV+
Subjt:  DRSITYPKGKIEDVLVQ

TrEMBL top hitse value%identityAlignment
A0A2G9FWY3 Reverse transcriptase6.8e-1034.78Show/hide
Query:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEER-KKPSKPQEVE----------------------------------RVVIVMLSKKSWV
        AN + +RPQG++PS+ E +P ++GK Q QAVTLR+G+ L+E  K+P+K +E E                                  + +  +LSKK  +
Subjt:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEER-KKPSKPQEVE----------------------------------RVVIVMLSKKSWV

Query:  ------------CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDL----------PQS--TPIADRSITYPKGKIEDVLVQ
                     AI++N LP K++D GS TIP +IG    G+   DL          P S    +ADRS+TYPKG IED+LV+
Subjt:  ------------CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDL----------PQS--TPIADRSITYPKGKIEDVLVQ

A0A2G9H400 Reverse transcriptase2.9e-0832.82Show/hide
Query:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSK-------PQEVERVVIVMLSK--------------KSWV-------------
        AN + +RPQG++ S+ E +P ++GK Q QAVTLR+G+ L+E  K+P+K       P+E E+ V  +L K               S+V             
Subjt:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSK-------PQEVERVVIVMLSK--------------KSWV-------------

Query:  ------------CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ
                     AI++N LP K++D GS TIP +IG    G+   DL  S                         +ADRS+TYPKG IED+LV+
Subjt:  ------------CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ

A0A2G9HJB6 Reverse transcriptase1.5e-0936.42Show/hide
Query:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSKPQEVE-RVVIVMLSKKSWV------------CAILKNGLPSKVEDLGSSTIP
        AN + +R QG++PS+ E +P +E K Q QAVTL +G+ L+E  K+P+KP+  E + +  ++SKK  +             AI++N LP K++D GS T+P
Subjt:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSKPQEVE-RVVIVMLSKKSWV------------CAILKNGLPSKVEDLGSSTIP

Query:  VSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ
         +IG    G+   DL  S                         +ADRS+TYPKG IED+LV+
Subjt:  VSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ

A0A2G9HWL8 DNA-directed DNA polymerase1.5e-0934.22Show/hide
Query:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSKPQEVE--------------------------RVVIVMLSKKSWV--------
        AN +  RPQG++PS+IE +P ++GK Q QAVTLR+G+ L+E  K+P K +E E                          + +  +LSKK  +        
Subjt:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE-RKKPSKPQEVE--------------------------RVVIVMLSKKSWV--------

Query:  ----CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ
             AI++N LP K++D GS TIP +IG    G+   DL  S                         +ADRS+TYPKG IED+LV+
Subjt:  ----CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDLPQS-----------------------TPIADRSITYPKGKIEDVLVQ

A0A2G9I3H5 Reverse transcriptase1.5e-0934.68Show/hide
Query:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE------------------RKKPSKPQEVE---------RVVIVMLSKKSWV--------
        AN + +RPQG++PS+ E +P ++GK Q QAVTLR+G+ L+E                   K+   P EV+         + +  +LSKK  +        
Subjt:  ANELKARPQGNIPSDIE-HPIREGKKQVQAVTLRSGKPLEE------------------RKKPSKPQEVE---------RVVIVMLSKKSWV--------

Query:  ----CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDLPQS---------TPIADRSITYPKGKIEDVLVQ
              I++N LP K++D GS  IP +IG    G+   DL  S           +ADRS+TYPKG IED+LV+
Subjt:  ----CAILKNGLPSKVEDLGSSTIPVSIG----GKVKLDLPQS---------TPIADRSITYPKGKIEDVLVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTAATGGGAGAAGCTTGAAGAACAAGCTATGGAGGTTGGTTTTGGAGTGGAGTGATTTTGGCAGCAATTCCCTAAGGAAGAAGATCAATTTCTTCAGCAATTC
ACTTCCCTTTTATAGAGGGAAGATAGCTGAAGAAGGTGACCAGGGATTGACACCAAATTACCCAACATTAAGTGGAGATGGAGCAAAAGCGTGGTTGAATTCTCTTACTC
CAGGATCACTGCCAGTGGTGGAGCTTGCTGCAGTTGTAAACCAAGTGGCAGCCAAATCTCGTGTCTATTGTGGTGAAGAGCATAATTATGAGTTTTGTCCTAACAATCCA
GCTTTTGTGTTTTTTGCAGCTAATGAGCTGAAGGCACGACCTCAAGGGAACATTCCTTCAGATATTGAACACCCTATAAGGGAAGGTAAGAAGCAGGTGCAAGCAGTGAC
TTTAAGGAGTGGTAAGCCACTAGAAGAGAGGAAAAAGCCTAGTAAACCTCAGGAAGTAGAAAGAGTAGTGATAGTAATGTTGTCGAAAAAGAGTTGGGTCTGTGCTATTC
TTAAGAATGGGCTACCTTCCAAGGTTGAGGATCTAGGATCATCCACTATTCCTGTCTCTATAGGTGGAAAGGTGAAGCTAGACCTACCACAGTCAACTCCAATAGCAGAT
AGGTCTATCACATATCCTAAAGGTAAAATTGAGGATGTTCTGGTCCAGCAACCTGAGATTAGGAAATCCTTCTTGATGATCATTATTTACTGTAGCTCATATCAAGGCAG
TGAAAACACCTTGATTAGGAGCGCAGTTTTGAGGGAGCAAAATTTCAGCATTCTAATAGAAGCTCCCATTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTAATGGGAGAAGCTTGAAGAACAAGCTATGGAGGTTGGTTTTGGAGTGGAGTGATTTTGGCAGCAATTCCCTAAGGAAGAAGATCAATTTCTTCAGCAATTC
ACTTCCCTTTTATAGAGGGAAGATAGCTGAAGAAGGTGACCAGGGATTGACACCAAATTACCCAACATTAAGTGGAGATGGAGCAAAAGCGTGGTTGAATTCTCTTACTC
CAGGATCACTGCCAGTGGTGGAGCTTGCTGCAGTTGTAAACCAAGTGGCAGCCAAATCTCGTGTCTATTGTGGTGAAGAGCATAATTATGAGTTTTGTCCTAACAATCCA
GCTTTTGTGTTTTTTGCAGCTAATGAGCTGAAGGCACGACCTCAAGGGAACATTCCTTCAGATATTGAACACCCTATAAGGGAAGGTAAGAAGCAGGTGCAAGCAGTGAC
TTTAAGGAGTGGTAAGCCACTAGAAGAGAGGAAAAAGCCTAGTAAACCTCAGGAAGTAGAAAGAGTAGTGATAGTAATGTTGTCGAAAAAGAGTTGGGTCTGTGCTATTC
TTAAGAATGGGCTACCTTCCAAGGTTGAGGATCTAGGATCATCCACTATTCCTGTCTCTATAGGTGGAAAGGTGAAGCTAGACCTACCACAGTCAACTCCAATAGCAGAT
AGGTCTATCACATATCCTAAAGGTAAAATTGAGGATGTTCTGGTCCAGCAACCTGAGATTAGGAAATCCTTCTTGATGATCATTATTTACTGTAGCTCATATCAAGGCAG
TGAAAACACCTTGATTAGGAGCGCAGTTTTGAGGGAGCAAAATTTCAGCATTCTAATAGAAGCTCCCATTATTTGA
Protein sequenceShow/hide protein sequence
MEFNGRSLKNKLWRLVLEWSDFGSNSLRKKINFFSNSLPFYRGKIAEEGDQGLTPNYPTLSGDGAKAWLNSLTPGSLPVVELAAVVNQVAAKSRVYCGEEHNYEFCPNNP
AFVFFAANELKARPQGNIPSDIEHPIREGKKQVQAVTLRSGKPLEERKKPSKPQEVERVVIVMLSKKSWVCAILKNGLPSKVEDLGSSTIPVSIGGKVKLDLPQSTPIAD
RSITYPKGKIEDVLVQQPEIRKSFLMIIIYCSSYQGSENTLIRSAVLREQNFSILIEAPII