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Lag0026101 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026101
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationchr10:29235637..29235969
RNA-Seq ExpressionLag0026101
SyntenyLag0026101
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]1.9e-3472.73Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+ HKSD +K ++T K LE  DRS +E   EAL+ A D  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SS+KRRCTSV
Subjt:  SSAKRRCTSV

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]1.8e-2164.44Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV
        MS+FHKSD QK ++  +  E  DRS +E   EAL+ A    GESCRTPTS +HRIP  +SCPTTPRK++VV KRKFSDQSFFEATGRGE+
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3375.45Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+FHKSD QK  +  KP EE DRS +EDG      A D GGESCRTPTSLRHRIPT RS PTTPRKRKV SKRKFSDQSFFE TGRGEVESLF LFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SSAKRR T++
Subjt:  SSAKRRCTSV

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3877.27Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSEF  SD QKS++ QKP EE DRS +EDG EAL    DGGGESCRTP+SL+HRIP  RSCPTTPRK+KVVSKRKFSDQSFFE+T R EVESLFGLFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SS KRRCTS+
Subjt:  SSAKRRCTSV

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-3273.64Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+FHKSD QK  +  KP EE DRS +EDG      A D  GESCRTPTSLRHRIPT RS PTTPRKRK+ SKRKFSDQSFFE TGRGEVESLF LFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SSAKRR T++
Subjt:  SSAKRRCTSV

TrEMBL top hitse value%identityAlignment
A0A0A0LV74 Uncharacterized protein2.0e-2165.17Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGE
        MS+FHKSD QK ++  +  E  DRS +E   EAL+ A    GESCRTPTS +HRIP  +SCPTTPRK++VV KRKFSDQSFFEATGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGE

A0A2H5Q221 Uncharacterized protein1.6e-1047.87Show/hide
Query:  RSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV
        ++++E G E    + D   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV

A0A2P5C2R0 Uncharacterized protein9.2e-1141.18Show/hide
Query:  EFHKSDLQKSVQTQKPLEE-----ADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRK-----RKVVSKRKFSDQSFFEATGRGEVES
        + H+  L+K+ + +  LE+     AD ++DE+G +  +       E+CRTPTS   +IP ++SCP TPRK     +  V+KRKFS+  FFE+T R EVES
Subjt:  EFHKSDLQKSVQTQKPLEE-----ADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRK-----RKVVSKRKFSDQSFFEATGRGEVES

Query:  LF-GLFYRVSSAKRRCTSV
         F  +F ++S  K+RC SV
Subjt:  LF-GLFYRVSSAKRRCTSV

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR29.1e-3572.73Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+ HKSD +K ++T K LE  DRS +E   EAL+ A D  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SS+KRRCTSV
Subjt:  SSAKRRCTSV

V4RSW1 Uncharacterized protein1.6e-1047.87Show/hide
Query:  RSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV
        ++++E G E    + D   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV

SwissProt top hitse value%identityAlignment
Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR24.7e-0438.95Show/hide
Query:  SDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        S L ++++ +K +E+  RS +E+  +      +   ES  TPTS  H+IP V +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  SDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein3.3e-0538.95Show/hide
Query:  SDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        S L ++++ +K +E+  RS +E+  +      +   ES  TPTS  H+IP V +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  SDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAATTTCACAAATCCGATCTCCAAAAGTCAGTACAAACTCAAAAGCCACTGGAAGAAGCTGATCGGAGCGACGACGAAGACGGTCGAGAAGCCCTTCAGGTGGC
ACCCGATGGTGGCGGAGAGAGCTGTCGAACTCCGACATCTCTCCGACATCGAATTCCGACCGTGCGAAGCTGCCCGACGACGCCAAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAATTTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGGTAGAGTCTTTGTTTGGCTTATTTTATAGGGTTTCTTCTGCCAAAAGAAGATGCACTAGTGTA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAATTTCACAAATCCGATCTCCAAAAGTCAGTACAAACTCAAAAGCCACTGGAAGAAGCTGATCGGAGCGACGACGAAGACGGTCGAGAAGCCCTTCAGGTGGC
ACCCGATGGTGGCGGAGAGAGCTGTCGAACTCCGACATCTCTCCGACATCGAATTCCGACCGTGCGAAGCTGCCCGACGACGCCAAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAATTTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGGTAGAGTCTTTGTTTGGCTTATTTTATAGGGTTTCTTCTGCCAAAAGAAGATGCACTAGTGTA
TAA
Protein sequenceShow/hide protein sequence
MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSSAKRRCTSV