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Lag0026105 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026105
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationchr10:29433699..29434436
RNA-Seq ExpressionLag0026105
SyntenyLag0026105
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63566.1 hypothetical protein L484_026904 [Morus notabilis]3.7e-0635Show/hide
Query:  LKRDFLFERGFGSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQD
        ++R F++ RG  S  P F+ S +A+  W  FC  P      +VR+FYAN +  +   + ++G  +  + EAIN+L+DL D
Subjt:  LKRDFLFERGFGSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQD

KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]3.3e-0734.23Show/hide
Query:  RFVNELAGAKYQEVLKRDFLFERGF-------GSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQ
        +F N+ A A++Q    R   FE GF       G   P  ++  M  L W++F   P  VN+++V+EFYAN+   + + + V+G  ++ +  AIN+ F LQ
Subjt:  RFVNELAGAKYQEVLKRDFLFERGF-------GSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQ

Query:  DF--PHAVFNE
        D    HA F E
Subjt:  DF--PHAVFNE

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]3.7e-0635.92Show/hide
Query:  FVNELAGAKYQEVLKRDFLFERGFGSVLPRFLESGMASLG-----------WRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLF
        FV+E A   YQ +  R   FE GF      F E+  A+LG           W++F   P PVN+ IV+EFY+N+   +   V+V+G+ ++ +  AIN  F
Subjt:  FVNELAGAKYQEVLKRDFLFERGFGSVLPRFLESGMASLG-----------WRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLF

Query:  DLQ
         LQ
Subjt:  DLQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]3.3e-0736.27Show/hide
Query:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL
        ++  +E A  +Y+E +  R    E+GF          P F+E  +    W+ FCA P+ + + +VREFYAN+   DD  V V+GV V  S EAIN ++ L
Subjt:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL

Query:  QD
         D
Subjt:  QD

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]2.8e-0636.27Show/hide
Query:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL
        ++F +E A  +Y+E +  R    E+GF          P F+   +    W+ FCA P+     +VREFYAN+   DD  V V+GV V  S EAIN ++ L
Subjt:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL

Query:  QD
         D
Subjt:  QD

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein1.6e-0736.27Show/hide
Query:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL
        ++  +E A  +Y+E +  R    E+GF          P F+E  +    W+ FCA P+ + + +VREFYAN+   DD  V V+GV V  S EAIN ++ L
Subjt:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL

Query:  QD
         D
Subjt:  QD

A0A2P5CXV1 Uncharacterized protein1.4e-0636.27Show/hide
Query:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL
        ++F +E A  +Y+E +  R    E+GF          P F+   +    W+ FCA P+     +VREFYAN+   DD  V V+GV V  S EAIN ++ L
Subjt:  IRFVNELAGAKYQE-VLKRDFLFERGFGS------VLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDL

Query:  QD
         D
Subjt:  QD

A0A6A2WM54 Uncharacterized protein1.6e-0734.23Show/hide
Query:  RFVNELAGAKYQEVLKRDFLFERGF-------GSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQ
        +F N+ A A++Q    R   FE GF       G   P  ++  M  L W++F   P  VN+++V+EFYAN+   + + + V+G  ++ +  AIN+ F LQ
Subjt:  RFVNELAGAKYQEVLKRDFLFERGF-------GSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQ

Query:  DF--PHAVFNE
        D    HA F E
Subjt:  DF--PHAVFNE

A0A6A2ZUE4 Uncharacterized protein1.8e-0635.92Show/hide
Query:  FVNELAGAKYQEVLKRDFLFERGFGSVLPRFLESGMASLG-----------WRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLF
        FV+E A   YQ +  R   FE GF      F E+  A+LG           W++F   P PVN+ IV+EFY+N+   +   V+V+G+ ++ +  AIN  F
Subjt:  FVNELAGAKYQEVLKRDFLFERGFGSVLPRFLESGMASLG-----------WRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLF

Query:  DLQ
         LQ
Subjt:  DLQ

W9R159 Uncharacterized protein1.8e-0635Show/hide
Query:  LKRDFLFERGFGSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQD
        ++R F++ RG  S  P F+ S +A+  W  FC  P      +VR+FYAN +  +   + ++G  +  + EAIN+L+DL D
Subjt:  LKRDFLFERGFGSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAINNLFDLQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGTTCAGAATCTTGAGACAGAACCGATAGTTTCTGCTACGGTTCAAGAAGGGGATGCTGTGAAAAATCAGGAAACGGAGGCTGAAGAGCAAGTCGCATGTGA
GCCTGGCGAGGAGAAAACACCTGAGCCGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCACCGCCGCATCAAAAGGAAGGCGGGTCGCGTGAGGGTGGTTC
GGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAGAGGGAAGCTGAAAATAAGGCAAAAGAAGAGGAGACAAGGAAGGCAGATGAAGAGCGTTTGCGCGAA
CAAAGAGAAAACAGGGGCAAAGGAATTGCCGAAGCATCGGGTGAGATTGAGGAGCCGAGGGAACCATTCATTCGCTTCGTCAACGAACTTGCCGGAGCAAAATATCAGGA
AGTACTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGGCAGTGTTTTGCCCAGGTTTTTGGAGTCTGGAATGGCGAGCCTTGGGTGGAGGCAGTTTTGTGCGAAGCCTG
ATCCTGTCAATTCCAACATCGTTCGGGAATTCTATGCCAATCTTGACGTTAAGGATGATTTCGAAGTCATAGTGCAAGGAGTGCCTGTCCAATGCAGCCTAGAGGCTATT
AATAATTTGTTTGATCTTCAGGACTTTCCACACGCAGTTTTCAATGAGATGATGATTGCCCATCGAGCGACCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGTTCAGAATCTTGAGACAGAACCGATAGTTTCTGCTACGGTTCAAGAAGGGGATGCTGTGAAAAATCAGGAAACGGAGGCTGAAGAGCAAGTCGCATGTGA
GCCTGGCGAGGAGAAAACACCTGAGCCGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCACCGCCGCATCAAAAGGAAGGCGGGTCGCGTGAGGGTGGTTC
GGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAGAGGGAAGCTGAAAATAAGGCAAAAGAAGAGGAGACAAGGAAGGCAGATGAAGAGCGTTTGCGCGAA
CAAAGAGAAAACAGGGGCAAAGGAATTGCCGAAGCATCGGGTGAGATTGAGGAGCCGAGGGAACCATTCATTCGCTTCGTCAACGAACTTGCCGGAGCAAAATATCAGGA
AGTACTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGGCAGTGTTTTGCCCAGGTTTTTGGAGTCTGGAATGGCGAGCCTTGGGTGGAGGCAGTTTTGTGCGAAGCCTG
ATCCTGTCAATTCCAACATCGTTCGGGAATTCTATGCCAATCTTGACGTTAAGGATGATTTCGAAGTCATAGTGCAAGGAGTGCCTGTCCAATGCAGCCTAGAGGCTATT
AATAATTTGTTTGATCTTCAGGACTTTCCACACGCAGTTTTCAATGAGATGATGATTGCCCATCGAGCGACCAATTAA
Protein sequenceShow/hide protein sequence
MENVQNLETEPIVSATVQEGDAVKNQETEAEEQVACEPGEEKTPEPEAHVEVVMPEPPKHRRIKRKAGRVRVVRNTPSPPTSDSEEEKREAENKAKEEETRKADEERLRE
QRENRGKGIAEASGEIEEPREPFIRFVNELAGAKYQEVLKRDFLFERGFGSVLPRFLESGMASLGWRQFCAKPDPVNSNIVREFYANLDVKDDFEVIVQGVPVQCSLEAI
NNLFDLQDFPHAVFNEMMIAHRATN