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Lag0026108 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026108
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:29542243..29550943
RNA-Seq ExpressionLag0026108
SyntenyLag0026108
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS36973.1 hypothetical protein Acr_00g0049030 [Actinidia rufa]1.8e-0647.06Show/hide
Query:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN
        ++A ++R  +YYN +VK  +F   DLVLR+V  +TRDP+AG LGP WE PY+     RP  C   D N
Subjt:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN

GFY89183.1 hypothetical protein Acr_06g0011230 [Actinidia rufa]3.6e-0742.22Show/hide
Query:  NQDWWRLHFPPLGNK-----VGRSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN
        N+   RL+   LG K     + ++A ++R  +YYN +VK  +F   DLVLR+V  +TRDP+AG LGP WE PY+     RP  C   D N
Subjt:  NQDWWRLHFPPLGNK-----VGRSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN

GFZ06995.1 hypothetical protein Acr_18g0011650 [Actinidia rufa]8.1e-0742.31Show/hide
Query:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDENNSCRGQIFSL
        ++A ++R  +YYN +VK  +F   DLVLR+V  +TRDP+AG LGP WE PY+     RP  C   D N     +I  +
Subjt:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDENNSCRGQIFSL

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]1.2e-0764.58Show/hide
Query:  QTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ
        + R  RYYN+KVK+  FKE DLVLRKVM NT+D  +GALGP WE PY+
Subjt:  QTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ

XP_030486931.1 uncharacterized protein LOC115703840 [Cannabis sativa]6.2e-0751.79Show/hide
Query:  NKVGRSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ
        +++  +A Q +  RY+N+KVK  +FK  DLVLR+V+ NT+DP AG LGP WE PY+
Subjt:  NKVGRSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ

TrEMBL top hitse value%identityAlignment
A0A2N9FMM4 Ribonuclease H8.7e-0750.88Show/hide
Query:  QTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQRPNFCTFPD
        Q +  +YYNTKVK   F+  D VLRK+ Q T+DP+ G LGP WE PY+ P +C   D
Subjt:  QTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQRPNFCTFPD

A0A6J1DZU0 Ribonuclease H6.0e-0864.58Show/hide
Query:  QTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ
        + R  RYYN+KVK+  FKE DLVLRKVM NT+D  +GALGP WE PY+
Subjt:  QTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ

A0A7J0DM35 Ribonuclease H8.7e-0747.06Show/hide
Query:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN
        ++A ++R  +YYN +VK  +F   DLVLR+V  +TRDP+AG LGP WE PY+     RP  C   D N
Subjt:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN

A0A7J0ERX3 Ribonuclease H1.8e-0742.22Show/hide
Query:  NQDWWRLHFPPLGNK-----VGRSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN
        N+   RL+   LG K     + ++A ++R  +YYN +VK  +F   DLVLR+V  +TRDP+AG LGP WE PY+     RP  C   D N
Subjt:  NQDWWRLHFPPLGNK-----VGRSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDEN

A0A7J0G862 Integrase catalytic domain-containing protein3.9e-0742.31Show/hide
Query:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDENNSCRGQIFSL
        ++A ++R  +YYN +VK  +F   DLVLR+V  +TRDP+AG LGP WE PY+     RP  C   D N     +I  +
Subjt:  RSASQTRSDRYYNTKVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQ-----RPNFCTFPDENNSCRGQIFSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTACCTGCCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCTCCTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACCTTTAT
CATGGAGGTGTTGTTTACCCTGGCCTCCAGCTCCTTTAATACACCATCGGTGCTTGTTTACCCTGTCCGATACCTTTATCATGGAGACCATCTTAGCATATCTTTGGGTG
CCCAGTCACACCCTCTAAATCAAGACTGGTGGCGACTCCATTTTCCTCCTCTTGGGAACAAAGTCGGCCGCTCCGCGTCGCAAACCCGTAGCGACAGGTATTATAACACA
AAAGTGAAAAGACACACTTTCAAGGAAGAAGATCTAGTATTGAGGAAAGTCATGCAGAACACTAGAGATCCCAATGCAGGTGCATTGGGACCAGCATGGGAAGAACCTTA
TCAAAGGCCAAATTTCTGCACTTTCCCAGACGAGAATAATTCTTGTAGAGGCCAAATTTTCTCACTTTCCCAGACGAGAATGATTCTTGCAGAGACTAATTCCTGCAGAG
AGGTTGACGCATGTCCTCAACCTCCCCAGGGCCAGACAAATCTACACATAAGCCTAACTGTAGAGCGAGCGAGCAAAGAATACAGAGGAGCTGGTCGGCCACATGCCAAG
ACCGAGGCCGACCATCCACTTTCAAAAGGCCAGGACCAGAAAGCCGACCCAGAGGAAGACCGGACCAAAGGGTCGGGTCAATATGGTCGGCCTCGGCATAAGGCCAAGGC
CGACCATTCGGCCCGCTTGCACGGGCCGAGCTTGGTCACCTCCCTTCGGTCCCTGATACCCCAGACTGCCTCGATTTTGCCTGCTACTCCTCGGTTTTCTGACTTAAGCA
TCGGAGGCGGTGTGGCCTACACCACACCGGTGTGCAGCGGTTCTTTCTGGTCTTGCAGAGATTCGAGCATTAGATCGAGATTTTGGAAGCCAATTGTAGAAATTGGTGCT
AATTCGGACAAATTAGGATGCTTTGGAGATACCTTGGTGTCCATGGATGAAGAGGAGGTGAAAAGGCAGAAGCCTGATGACCATAAAGCGCACGGGTCAAGTAATATAAT
GATTACCTTTGTACTGAAAGCATTCATCAACATTGGCCATCAGTTTTTGAAAAACCCTCCCCTTCCAAATCCCAACAACATGTTCTGGACTTTAGGATTGATTTCTTATA
ACAATGTTATGCAAATCAAATCCCTTAATATTCTCGATTCTTCTTTTGTCATCAAATCTCTCTTTGTCGTTCCTCGCCCTCCACCGTCAGGAAGGACCCAGGCTGGATTG
GTTTCATCAACGATGTTGGTAGAGCTGTCGATAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTACCTGCCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCTCCTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACCTTTAT
CATGGAGGTGTTGTTTACCCTGGCCTCCAGCTCCTTTAATACACCATCGGTGCTTGTTTACCCTGTCCGATACCTTTATCATGGAGACCATCTTAGCATATCTTTGGGTG
CCCAGTCACACCCTCTAAATCAAGACTGGTGGCGACTCCATTTTCCTCCTCTTGGGAACAAAGTCGGCCGCTCCGCGTCGCAAACCCGTAGCGACAGGTATTATAACACA
AAAGTGAAAAGACACACTTTCAAGGAAGAAGATCTAGTATTGAGGAAAGTCATGCAGAACACTAGAGATCCCAATGCAGGTGCATTGGGACCAGCATGGGAAGAACCTTA
TCAAAGGCCAAATTTCTGCACTTTCCCAGACGAGAATAATTCTTGTAGAGGCCAAATTTTCTCACTTTCCCAGACGAGAATGATTCTTGCAGAGACTAATTCCTGCAGAG
AGGTTGACGCATGTCCTCAACCTCCCCAGGGCCAGACAAATCTACACATAAGCCTAACTGTAGAGCGAGCGAGCAAAGAATACAGAGGAGCTGGTCGGCCACATGCCAAG
ACCGAGGCCGACCATCCACTTTCAAAAGGCCAGGACCAGAAAGCCGACCCAGAGGAAGACCGGACCAAAGGGTCGGGTCAATATGGTCGGCCTCGGCATAAGGCCAAGGC
CGACCATTCGGCCCGCTTGCACGGGCCGAGCTTGGTCACCTCCCTTCGGTCCCTGATACCCCAGACTGCCTCGATTTTGCCTGCTACTCCTCGGTTTTCTGACTTAAGCA
TCGGAGGCGGTGTGGCCTACACCACACCGGTGTGCAGCGGTTCTTTCTGGTCTTGCAGAGATTCGAGCATTAGATCGAGATTTTGGAAGCCAATTGTAGAAATTGGTGCT
AATTCGGACAAATTAGGATGCTTTGGAGATACCTTGGTGTCCATGGATGAAGAGGAGGTGAAAAGGCAGAAGCCTGATGACCATAAAGCGCACGGGTCAAGTAATATAAT
GATTACCTTTGTACTGAAAGCATTCATCAACATTGGCCATCAGTTTTTGAAAAACCCTCCCCTTCCAAATCCCAACAACATGTTCTGGACTTTAGGATTGATTTCTTATA
ACAATGTTATGCAAATCAAATCCCTTAATATTCTCGATTCTTCTTTTGTCATCAAATCTCTCTTTGTCGTTCCTCGCCCTCCACCGTCAGGAAGGACCCAGGCTGGATTG
GTTTCATCAACGATGTTGGTAGAGCTGTCGATAGGCTGA
Protein sequenceShow/hide protein sequence
MVLPADTFIMEVLVYPWPPAPLIHHRVLVYPWPDTFIMEVLFTLASSSFNTPSVLVYPVRYLYHGDHLSISLGAQSHPLNQDWWRLHFPPLGNKVGRSASQTRSDRYYNT
KVKRHTFKEEDLVLRKVMQNTRDPNAGALGPAWEEPYQRPNFCTFPDENNSCRGQIFSLSQTRMILAETNSCREVDACPQPPQGQTNLHISLTVERASKEYRGAGRPHAK
TEADHPLSKGQDQKADPEEDRTKGSGQYGRPRHKAKADHSARLHGPSLVTSLRSLIPQTASILPATPRFSDLSIGGGVAYTTPVCSGSFWSCRDSSIRSRFWKPIVEIGA
NSDKLGCFGDTLVSMDEEEVKRQKPDDHKAHGSSNIMITFVLKAFINIGHQFLKNPPLPNPNNMFWTLGLISYNNVMQIKSLNILDSSFVIKSLFVVPRPPPSGRTQAGL
VSSTMLVELSIG