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Lag0026117 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026117
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:29827644..29828212
RNA-Seq ExpressionLag0026117
SyntenyLag0026117
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.3e-1446.02Show/hide
Query:  IPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR
        +P L  +F   G IH E   ++V+ A+ EE+++V P VY C + FEL+NW+V        EI   ND KYELD+P Y++ES++     E D E + ELLR
Subjt:  IPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR

Query:  MIQEEERMLGPHE
        M++EEE+MLGPHE
Subjt:  MIQEEERMLGPHE

XP_022147181.1 uncharacterized protein LOC111016192 [Momordica charantia]3.3e-2151.26Show/hide
Query:  IPHLHDTFNFTGIIHSESQDAAVMA-IIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNV------NDLKYELDSPTYDVESNERASGNEEDLEL
        +P L  +F   GIIH E  +++V+A + EE+++VGP VY C + FEL+NW+V+ELPS VN  SN       ND KYELD+P Y++ES+E     E D E 
Subjt:  IPHLHDTFNFTGIIHSESQDAAVMA-IIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNV------NDLKYELDSPTYDVESNERASGNEEDLEL

Query:  TPELLRMIQEEERMLGPHE
        + ELLRM+ EEE+MLGPHE
Subjt:  TPELLRMIQEEERMLGPHE

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.6e-2050.83Show/hide
Query:  IIPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLE
        I+P L  +F   G IH E  +++V+ A+ EE+++VGP VYLC + FEL+NW+V++LPS VN  SN       ND KYELD+P Y +ES+E     E D E
Subjt:  IIPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLE

Query:  LTPELLRMIQEEERMLGPHE
         + ELLRM++EEE+MLGPHE
Subjt:  LTPELLRMIQEEERMLGPHE

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]5.0e-1445.13Show/hide
Query:  IPHLHDTFNFTGIIHSESQDAAV-MAIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR
        +P L  +    G IH E  +++V  A+ EE+++V P VY C + F+L+NW+V        EI   ND KYELD+P Y++ES+E     E D E + ELLR
Subjt:  IPHLHDTFNFTGIIHSESQDAAV-MAIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR

Query:  MIQEEERMLGPHE
        M++EEE+MLGPHE
Subjt:  MIQEEERMLGPHE

XP_022158764.1 uncharacterized protein LOC111025231 [Momordica charantia]4.7e-1252.75Show/hide
Query:  EEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLELTPELLRMIQEEERMLGPHE
        EE+++VGP VY   + FEL+NW+V+EL S VN  SN       ND KYELD+P Y++ES+E     E++ E + ELLRM+ EEE+MLGPHE
Subjt:  EEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLELTPELLRMIQEEERMLGPHE

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H6.4e-1546.02Show/hide
Query:  IPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR
        +P L  +F   G IH E   ++V+ A+ EE+++V P VY C + FEL+NW+V        EI   ND KYELD+P Y++ES++     E D E + ELLR
Subjt:  IPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR

Query:  MIQEEERMLGPHE
        M++EEE+MLGPHE
Subjt:  MIQEEERMLGPHE

A0A6J1D099 Ribonuclease H7.8e-2150.83Show/hide
Query:  IIPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLE
        I+P L  +F   G IH E  +++V+ A+ EE+++VGP VYLC + FEL+NW+V++LPS VN  SN       ND KYELD+P Y +ES+E     E D E
Subjt:  IIPHLHDTFNFTGIIHSESQDAAVM-AIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLE

Query:  LTPELLRMIQEEERMLGPHE
         + ELLRM++EEE+MLGPHE
Subjt:  LTPELLRMIQEEERMLGPHE

A0A6J1D1K4 uncharacterized protein LOC1110161921.6e-2151.26Show/hide
Query:  IPHLHDTFNFTGIIHSESQDAAVMA-IIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNV------NDLKYELDSPTYDVESNERASGNEEDLEL
        +P L  +F   GIIH E  +++V+A + EE+++VGP VY C + FEL+NW+V+ELPS VN  SN       ND KYELD+P Y++ES+E     E D E 
Subjt:  IPHLHDTFNFTGIIHSESQDAAVMA-IIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNV------NDLKYELDSPTYDVESNERASGNEEDLEL

Query:  TPELLRMIQEEERMLGPHE
        + ELLRM+ EEE+MLGPHE
Subjt:  TPELLRMIQEEERMLGPHE

A0A6J1D7C7 Ribonuclease H2.4e-1445.13Show/hide
Query:  IPHLHDTFNFTGIIHSESQDAAV-MAIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR
        +P L  +    G IH E  +++V  A+ EE+++V P VY C + F+L+NW+V        EI   ND KYELD+P Y++ES+E     E D E + ELLR
Subjt:  IPHLHDTFNFTGIIHSESQDAAV-MAIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLR

Query:  MIQEEERMLGPHE
        M++EEE+MLGPHE
Subjt:  MIQEEERMLGPHE

A0A6J1E0D0 uncharacterized protein LOC1110252312.3e-1252.75Show/hide
Query:  EEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLELTPELLRMIQEEERMLGPHE
        EE+++VGP VY   + FEL+NW+V+EL S VN  SN       ND KYELD+P Y++ES+E     E++ E + ELLRM+ EEE+MLGPHE
Subjt:  EEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISN------VNDLKYELDSPTYDVESNERASGNEEDLELTPELLRMIQEEERMLGPHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATCATTCCTCATCTTCATGATACCTTTAACTTTACTGGAATAATTCATTCGGAATCTCAAGACGCTGCAGTTATGGCTATAATCGAAGAAAAGAAAGAAGTTGG
TCCTTTGGTTTACCTGTGCCTAGAAGACTTTGAACTTAATAATTGGACTGTAATGGAGCTACCATCATTGGTTAATGAGATATCAAACGTTAATGATCTTAAATACGAAC
TTGATTCTCCTACATACGATGTTGAGTCCAATGAGAGAGCAAGTGGTAATGAGGAAGATCTAGAACTTACTCCTGAATTGTTGAGAATGATTCAAGAAGAAGAGAGGATG
TTGGGACCACATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACATCATTCCTCATCTTCATGATACCTTTAACTTTACTGGAATAATTCATTCGGAATCTCAAGACGCTGCAGTTATGGCTATAATCGAAGAAAAGAAAGAAGTTGG
TCCTTTGGTTTACCTGTGCCTAGAAGACTTTGAACTTAATAATTGGACTGTAATGGAGCTACCATCATTGGTTAATGAGATATCAAACGTTAATGATCTTAAATACGAAC
TTGATTCTCCTACATACGATGTTGAGTCCAATGAGAGAGCAAGTGGTAATGAGGAAGATCTAGAACTTACTCCTGAATTGTTGAGAATGATTCAAGAAGAAGAGAGGATG
TTGGGACCACATGAATAG
Protein sequenceShow/hide protein sequence
MNIIPHLHDTFNFTGIIHSESQDAAVMAIIEEKKEVGPLVYLCLEDFELNNWTVMELPSLVNEISNVNDLKYELDSPTYDVESNERASGNEEDLELTPELLRMIQEEERM
LGPHE