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Lag0026126 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026126
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:29967404..29967820
RNA-Seq ExpressionLag0026126
SyntenyLag0026126
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.4e-2457.14Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   EE+Q   ST  R S F+ LS+STS+K RPST+ FDRLK+TND+ +R M +L+ K F E N+D K+HS V SRMKRK SV INTEGSL  KP  
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  +  D  K
Subjt:  IILTNPTNEGSNQDYDREK

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]1.1e-2357.14Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   EE+Q   ST  R S F+ LS+STS+K RPST+ FDRLK+TND+ +R M +L+ K F E N D K+HS V SRMKRK SV INTEGSL  KP  
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  +  D  K
Subjt:  IILTNPTNEGSNQDYDREK

KAA0057874.1 gag protease polyprotein [Cucumis melo var. makuwa]3.4e-2559.83Show/hide
Query:  MAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNLII
        MA   EE+Q   ST TR S F+ LS+STS+K RPST+ FDRLK+TND+ +R M TL+EK F E N+D K+H+ VSSRMKRK SV INTEGSL  KP  II
Subjt:  MAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNLII

Query:  LTNPTNEGSNQDYDREK
         TNP NEG  +  D  K
Subjt:  LTNPTNEGSNQDYDREK

KAA0068201.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-2357.14Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   EE+Q  M T  + S F+ LS+STS K RPST+ FDRLK+TND+ +R M +L+ K F E N+D K+HS V SRMKRK SV INTEGSL  KP  
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  Q  D  K
Subjt:  IILTNPTNEGSNQDYDREK

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-2355.46Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   E++Q   ST  R S F+ LS+STS+K RPST+ FDRLK+TND+ +R M +L+ K F E N+D K+H+ V SRMKRK SV INTEGSL  KP  
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  + +D  K
Subjt:  IILTNPTNEGSNQDYDREK

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein4.1e-2457.14Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   EE+Q   ST  R S F+ LS+STS+K RPST+ FDRLK+TND+ +R M +L+ K F E N+D K+HS V SRMKRK SV INTEGSL  KP  
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  +  D  K
Subjt:  IILTNPTNEGSNQDYDREK

A0A5A7URU7 Gag protease polyprotein1.7e-2559.83Show/hide
Query:  MAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNLII
        MA   EE+Q   ST TR S F+ LS+STS+K RPST+ FDRLK+TND+ +R M TL+EK F E N+D K+H+ VSSRMKRK SV INTEGSL  KP  II
Subjt:  MAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNLII

Query:  LTNPTNEGSNQDYDREK
         TNP NEG  +  D  K
Subjt:  LTNPTNEGSNQDYDREK

A0A5A7VRG7 Retrotransposon gag protein5.3e-2457.14Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   EE+Q  M T  + S F+ LS+STS K RPST+ FDRLK+TND+ +R M +L+ K F E N+D K+HS V SRMKRK SV INTEGSL  KP  
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  Q  D  K
Subjt:  IILTNPTNEGSNQDYDREK

A0A5D3BBF9 Gag protease polyprotein5.3e-2457.14Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   EE+Q   ST  R S F+ LS+STS+K RPST+ FDRLK+TND+ +R M +L+ K F E N D K+HS V SRMKRK SV INTEGSL  KP  
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  +  D  K
Subjt:  IILTNPTNEGSNQDYDREK

A0A5D3D5Q0 Gag protease polyprotein9.1e-2456.3Show/hide
Query:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL
        +SMA   EE+Q   ST  R S F+ LS+STS+K RPST+ FDRLK+TND+ +R M +L+ K F E N+D K+HS V SRMKRK S+ INT+GSL  KP L
Subjt:  MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNL

Query:  IILTNPTNEGSNQDYDREK
        II TNP NEG  +  D  K
Subjt:  IILTNPTNEGSNQDYDREK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGCTGCAACAGGAGAAGAAGATCAAAGCTTGATGTCCACCATCACTCGACATTCAGTTTTCCAAAGCCTAAGCGTCTCTACGTCAAGAAAGTGTCGACCTTC
AACAACTGTTTTTGATCGCCTCAAAGTGACAAACGATCGACATGAAAGAAACATGGACACCTTGGAAGAAAAATTATTTGATGAAGTAAACAATGACAAGAAGCTTCATA
GTACCGTTTCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAGAAGGTTCCTTGAAGGGGAAACCAAATCTTATCATTTTGACAAATCCTACAAATGAAGGA
TCTAATCAAGACTATGATAGAGAAAAAGACGTCGCTTCATTTTCAAAGGTTGATCATCGACAACTTTGCTTCATCTTCAAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGCTGCAACAGGAGAAGAAGATCAAAGCTTGATGTCCACCATCACTCGACATTCAGTTTTCCAAAGCCTAAGCGTCTCTACGTCAAGAAAGTGTCGACCTTC
AACAACTGTTTTTGATCGCCTCAAAGTGACAAACGATCGACATGAAAGAAACATGGACACCTTGGAAGAAAAATTATTTGATGAAGTAAACAATGACAAGAAGCTTCATA
GTACCGTTTCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAGAAGGTTCCTTGAAGGGGAAACCAAATCTTATCATTTTGACAAATCCTACAAATGAAGGA
TCTAATCAAGACTATGATAGAGAAAAAGACGTCGCTTCATTTTCAAAGGTTGATCATCGACAACTTTGCTTCATCTTCAAAGGATAG
Protein sequenceShow/hide protein sequence
MSMAATGEEDQSLMSTITRHSVFQSLSVSTSRKCRPSTTVFDRLKVTNDRHERNMDTLEEKLFDEVNNDKKLHSTVSSRMKRKFSVLINTEGSLKGKPNLIILTNPTNEG
SNQDYDREKDVASFSKVDHRQLCFIFKG