CuGenDBv2

Gene ID	Lag0026129
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Cytochrome f
Genome location	chr10:29993724..30000247
RNA-Seq Expression	Lag0026129
Synteny	Lag0026129
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0022900 - electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0031361 - integral component of thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR002325 - Cytochrome f IPR011009 - Protein kinase-like domain superfamily IPR011054 - Rudiment single hybrid motif IPR036826 - Cytochrome f large domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009414657.1 cytochrome f [Paeonia ludlowii]

5.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

YP_009489759.1 cytochrome f [Paeonia suffruticosa]

5.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

YP_009489842.1 cytochrome f [Paeonia brownii]

5.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

YP_009559125.1 cytochrome f [Paeonia lactiflora]

5.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

YP_010126072.1 cytochrome f [Paeonia sp. CV Hwang-Moran]

5.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

TrEMBL top hits

e value

%identity

Alignment

A0A222AGG4 Cytochrome f

2.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

A0A411FEX5 Cytochrome f

2.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

A0A4D6SW59 Cytochrome f

2.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

A0A6M4B4J1 Cytochrome f

2.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

V9ZBJ7 Cytochrome f

2.9e-23

89.71

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Query:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++  TGA   ADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  QLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

SwissProt top hits

e value

%identity

Alignment

Q09X04 Cytochrome f

3.0e-25

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Query:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLV
        ++DGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL+
Subjt:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLV

Q0G9U9 Cytochrome f

3.9e-25

96.61

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Query:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++DGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

Q1KXU6 Cytochrome f

3.9e-25

96.61

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Query:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++DGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

Q6L387 Cytochrome f

5.0e-25

94.92

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Query:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++DGRQV+DIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

Q7YJW0 Cytochrome f

3.9e-25

96.61

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Query:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        ++DGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

Arabidopsis top hits

e value

%identity

Alignment

AT3G53380.1 Concanavalin A-like lectin protein kinase family protein

3.7e-07

47.06

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Query:  RNPFTTEFETMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGSQKRPLFQ
        +N F +E  +++G L H+NLV+LQGWC E  E++LV   +PNGS  + LF+
Subjt:  RNPFTTEFETMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGSQKRPLFQ

AT5G01550.1 lectin receptor kinase a4.1

2.2e-07

35.44

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Query:  PLVNSVKLLRSFPSPFNGISCVRNPFTTEFETMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGSQKRPLFQREEDGG
        P  + + + +  P+   G+      F  E E++ G L HKNLV LQGWC +  +L+L+  Y+PNGS    L+ R    G
Subjt:  PLVNSVKLLRSFPSPFNGISCVRNPFTTEFETMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGSQKRPLFQREEDGG

AT5G42120.1 Concanavalin A-like lectin protein kinase family protein

9.2e-14

73.91

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Query:  CVRNPFTTEFETMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGS
        C RNPFTTEF TM G L HKNLVQ QGWC E TE  LV  YLPNGS
Subjt:  CVRNPFTTEFETMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGS

AT5G55830.1 Concanavalin A-like lectin protein kinase family protein

6.8e-09

53.19

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Query:  TMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGSQKRPLFQREEDG
        +++ CL HKNLVQLQGWC E  EL+LV  ++PNGS  + L+Q  + G
Subjt:  TMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGSQKRPLFQREEDG

ATCG00540.1 photosynthetic electron transfer A

4.8e-23

88.14

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Query:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
        +++GR+V+DIIP G ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL
Subjt:  SADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLL

Sequences

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CDS sequence

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ATGCTTAATGACCTCAGAATTGCAAATACTCGAAGAACTCGATCACGGGAGACAATAGAGTTGTGGGTTGTTGGCAGTAGGCGTAGTTTGATGAATCCTAACCAAAGTGT
TGGCTTCACTCTTGAGATAAGCCGCTTGGAAGGAAAGTCGAGTCTTATAAAAGACGCCACTCTACGAGGGAAGTCCCCGGGTCGAGTCTTTGCGAGTTCACGTTCTATTA
TGAAACTCCCTACCAGGTGGCATAAAAGGAGTCTAACGCCTACCCTTTGGTTGCCCGCAGCTCCTGCCGCCCGCTTGGCGGGCTCCGCGCTCGTTATCCTTACAGTTCTC
TCTGCTGGGGCCCCCCATGGCTCTAGCCATAAGCTATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGCGGATGGGCGTCAAGTGGTTGATATTATCCCTCC
AGGACCAGAACTTCTTGTTTCAGAGGGCGAATCTATCAAACTTGATCAACCGTTAACGAGTAATCCTAATGTGGGAGGGTTTGGTCAGGGAGATGCGGAAATAGTCCTTC
AAGATCCATTACGTGTCCAAGGCCTTTTGGTACCGCTGCGGGTTCCTCTTTGGCAACGGGTCAAAAAGGGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC
CCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGATAGAAACAACGCTCGTAAGGAGTCCTATTGAAACCAAGAAATATAGGCCTGCCTGCCATCCACCTGT
CCCCCGATCTCTTTCGGAAAACAAGGCGGCTCATCCCGCTCAACCGCTTACCGCTCGAGAGCGCGAGAGCTGCAGTCGAACTCGTTGCAAGAAAAGGGCTTGCTTGCCTT
TAGGTAAGGGAATAGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCGGAGGC
CTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGAACGCTAGAATTGGGATATCGAGAAAGAGGGTAGACCGTAGAGGGTTCAACAAAGAAAAGCAAGA
AAACGTAGTTGTAGCTTGCTTCCAAGTCCAAGCGCTAGCGGTAGAAGCTAGTCGCCAGAAGCGAACTTCCGGGCCGGGAAGGAGCGAAAAGGCTGTTTTGGTTTGGGAAG
TGACGTTGAGACTGGGCACGTGCGATAAGAGAAGCAGTCTCGTTGACGAGGGGAAGGAGCGAAGCCACTTTACCGAGTTTATGAAGGGAAGGAGCGAAGCCGAGCAGCCA
GCAGCAACTAGAGCATCCCGTCTGAAGGCCGAAGGCAGGAAAGCAAGGCAAAGCTTTTTCCTCACCCTATCGGTCGAGCTGAACCCTCACCCGGCTGTGCCTTGGTCAAT
GACCTGGAAGGGATTCTATCCTCGTAGACGGTTTTTGAAGAAAGATAGAACCAGAGGATCGTTCTCCATTGGGATGACTATTCTAGAATCTTTCCATCTTCGGAGCGCAA
CTTTCCCTCAAAGCCCTGCAAGGGATGTGAAGCCCTTCTCAATGTCTTCCACTCACCCAGTGGATCCAGGAGGCAAGGGGAATCCGTTGATTTCATCCATTCCTGATGAT
GTGCCGCTGACCTCCGAATACAGGCCTAGATCGTACAGACTTTTGGGTCAAGCAAGAAAAAGAATAATATTTGGATTCTATGGACCCCTTGGACCTCCGACCAATGAGAA
AGCAATCCCTTCCAACCAGCCAACCCGCGGAGTTGAACACAAGCCCTTTTTAGTCAAGCTTCGACCAGGTTCTTCTATCAATCTCCTGGCCCTCCGGTTATTTCCTCCTT
CACCTCGTAAACTCGGTAAAGTTGCTTTGCTCCTTCCCCTCGTCAACTCGGTCAAGCTGCTTCGCTCCTTCCCCTCTCCCTTCAATGGAATTTCTTGCGTGCGCAATCCT
TTCACCACAGAGTTTGAAACAATGGTGGGTTGTTTACCGCACAAGAACTTGGTTCAGCTTCAAGGATGGTGCTGTGAAGATACTGAGTTAGTCCTGGTTTCTTATTACTT
ACCCAATGGAAGCCAGAAGCGTCCCCTGTTTCAAAGAGAGGAGGACGGTGGCTGGCAAACGCCAACCGAGAGGGGAGAACGAATGGCTCAGGAATCGACTGGTTCCGAGC
GGACTCATGGAGCTGCTGCTTGGATTATCGTAGAATAA

mRNA sequence

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Protein sequence

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MLNDLRIANTRRTRSRETIELWVVGSRRSLMNPNQSVGFTLEISRLEGKSSLIKDATLRGKSPGRVFASSRSIMKLPTRWHKRSLTPTLWLPAAPAARLAGSALVILTVL
SAGAPHGSSHKLWQLQLATTGAQRSADGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLVPLRVPLWQRVKKGGEMPLEPRASWFS
PKCVEAQQLTGHLGIETTLVRSPIETKKYRPACHPPVPRSLSENKAAHPAQPLTARERESCSRTRCKKRACLPLGKGIVGLAVKLPSAFALEGQSPSGPRKPLHASVTGG
LRPIETVYLRLSLGPNARIGISRKRVDRRGFNKEKQENVVVACFQVQALAVEASRQKRTSGPGRSEKAVLVWEVTLRLGTCDKRSSLVDEGKERSHFTEFMKGRSEAEQP
AATRASRLKAEGRKARQSFFLTLSVELNPHPAVPWSMTWKGFYPRRRFLKKDRTRGSFSIGMTILESFHLRSATFPQSPARDVKPFSMSSTHPVDPGGKGNPLISSIPDD
VPLTSEYRPRSYRLLGQARKRIIFGFYGPLGPPTNEKAIPSNQPTRGVEHKPFLVKLRPGSSINLLALRLFPPSPRKLGKVALLLPLVNSVKLLRSFPSPFNGISCVRNP
FTTEFETMVGCLPHKNLVQLQGWCCEDTELVLVSYYLPNGSQKRPLFQREEDGGWQTPTERGERMAQESTGSERTHGAAAWIIVE

Lag0026129 (gene) of Sponge gourd (AG-4) v1 genome