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Lag0026133 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026133
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:30049690..30050935
RNA-Seq ExpressionLag0026133
SyntenyLag0026133
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]5.9e-2942.31Show/hide
Query:  GDIERTKEARVGPSAPGPVGGDSGRKRKAAAREAHLESR------------------------YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIEL
        G+ +++    +     GP+  +SGRKRKA  REA                             +  ++AM LG   LK  P PLVGF GE+V P+G IE 
Subjt:  GDIERTKEARVGPSAPGPVGGDSGRKRKAAAREAHLESR------------------------YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIEL

Query:  PVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQKNVQRVLLHSINRKTRTA
        PVTFG G ++VTKM++ LVV+Y S+YN ILGRPT+H LRA+ STYHQ +KFPT  GVG I+G+Q+  +     S+    RT+
Subjt:  PVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQKNVQRVLLHSINRKTRTA

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]2.3e-2556.73Show/hide
Query:  SRYQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIR
        S    ++AM LG   LK   TPL+GF GE++ PKG IELP+TF    +++T+M++FLVVDY S+YNTIL RPT+H LRA+ STYHQ +KFPT  GVG I+
Subjt:  SRYQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIR

Query:  GKQK
        G+Q+
Subjt:  GKQK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]1.2e-2653.78Show/hide
Query:  YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGK
        +  ++AM LG   LK  P PLVGF GE+V  +G IELPVTFG G ++VTKM++FLVV+Y S+YN ILGRPT+H L+A+ STYHQ  KFPT  GVG I+G+
Subjt:  YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGK

Query:  QKNVQRVLLHSINRKTRTA
        Q+  +     S+    RT+
Subjt:  QKNVQRVLLHSINRKTRTA

XP_022158432.1 uncharacterized protein LOC111024924 [Momordica charantia]2.7e-2661.22Show/hide
Query:  FEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQ
        ++AM LG   LK  P PL+GF GE+V P+G IELPVTFG G +++TKM++FLVV+Y S+YN ILGRPT+H LRA+ STYHQ +KFPT  GV  I+G+Q
Subjt:  FEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQ

XP_030963816.1 uncharacterized protein LOC115984981 [Quercus lobata]1.0e-2532.74Show/hide
Query:  MGAWNRCKPQINLLTVKQGPKESLWDYIARFSNEVLQVEGYDDGVALIAVISSLQDEKLLNSIGESQPRTRKE--RSGECQLSIRGEKIEVGDIERTKEA
        +G     +   +LLT++QG  ESL  +I RF+ E L V+  DD + L A  + +  +  ++ + E +P+T  E  RS   +   +   I      R K+ 
Subjt:  MGAWNRCKPQINLLTVKQGPKESLWDYIARFSNEVLQVEGYDDGVALIAVISSLQDEKLLNSIGESQPRTRKE--RSGECQLSIRGEKIEVGDIERTKEA

Query:  --RVGPSAPGPVGGD---SGRKRKA-----------------AAREAHLES----------------------------RYQVFEAMKLGRGYLKPIPTP
          R    A   V  D   SG K  A                 A R  H                                Y  F+ M+LGR  L+P+ +P
Subjt:  --RVGPSAPGPVGGD---SGRKRKA-----------------AAREAHLES----------------------------RYQVFEAMKLGRGYLKPIPTP

Query:  LVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQ
        L+GF G KV P G++ LPV  G   Q +TK +NFLVVD  S+YN I+GRPTL+  +A+ STYH  +KFPTE G+G  +G Q
Subjt:  LVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQ

TrEMBL top hitse value%identityAlignment
A0A2N9EZK9 Reverse transcriptase domain-containing protein2.0e-2734.17Show/hide
Query:  MGAWNRCKPQINLLTVKQGPKESLWDYIARFSNEVLQVEGYDDGVALIAVISSLQDEKLLNSIGESQPRTRKERSGECQLSIRGEKIEVGDIERTKEARV
        +G+  R +P  +LL+VKQ   ESL  ++ RF+ E ++++   + V + A ++ L+    L  + +  P T  E   E    +  E           +A  
Subjt:  MGAWNRCKPQINLLTVKQGPKESLWDYIARFSNEVLQVEGYDDGVALIAVISSLQDEKLLNSIGESQPRTRKERSGECQLSIRGEKIEVGDIERTKEARV

Query:  GPSAPGPVGGDSGRKRKAAAREAHLESRYQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTL
            P P       KR+    +   E   Q   +  L +  L+P+   LVGF G+KV P G + LP+T G   + V+K ++FLVV+  S YN I+GRPTL
Subjt:  GPSAPGPVGGDSGRKRKAAAREAHLESRYQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTL

Query:  HELRAVASTYHQVLKFPTESGVGMIRGKQKNVQRVLLHSI
        + LRAV STYH +LKFPTE G+G +RG Q   +   L S+
Subjt:  HELRAVASTYHQVLKFPTESGVGMIRGKQKNVQRVLLHSI

A0A6J1CTS4 uncharacterized protein LOC1110141472.8e-2942.31Show/hide
Query:  GDIERTKEARVGPSAPGPVGGDSGRKRKAAAREAHLESR------------------------YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIEL
        G+ +++    +     GP+  +SGRKRKA  REA                             +  ++AM LG   LK  P PLVGF GE+V P+G IE 
Subjt:  GDIERTKEARVGPSAPGPVGGDSGRKRKAAAREAHLESR------------------------YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIEL

Query:  PVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQKNVQRVLLHSINRKTRTA
        PVTFG G ++VTKM++ LVV+Y S+YN ILGRPT+H LRA+ STYHQ +KFPT  GVG I+G+Q+  +     S+    RT+
Subjt:  PVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQKNVQRVLLHSINRKTRTA

A0A6J1CZ14 uncharacterized protein LOC1110159011.1e-2556.73Show/hide
Query:  SRYQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIR
        S    ++AM LG   LK   TPL+GF GE++ PKG IELP+TF    +++T+M++FLVVDY S+YNTIL RPT+H LRA+ STYHQ +KFPT  GVG I+
Subjt:  SRYQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIR

Query:  GKQK
        G+Q+
Subjt:  GKQK

A0A6J1DQY2 uncharacterized protein LOC1110223215.9e-2753.78Show/hide
Query:  YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGK
        +  ++AM LG   LK  P PLVGF GE+V  +G IELPVTFG G ++VTKM++FLVV+Y S+YN ILGRPT+H L+A+ STYHQ  KFPT  GVG I+G+
Subjt:  YQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGK

Query:  QKNVQRVLLHSINRKTRTA
        Q+  +     S+    RT+
Subjt:  QKNVQRVLLHSINRKTRTA

A0A6J1DX76 uncharacterized protein LOC1110249241.3e-2661.22Show/hide
Query:  FEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQ
        ++AM LG   LK  P PL+GF GE+V P+G IELPVTFG G +++TKM++FLVV+Y S+YN ILGRPT+H LRA+ STYHQ +KFPT  GV  I+G+Q
Subjt:  FEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTESGVGMIRGKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCTGGAATCGGTGCAAGCCACAAATCAATCTGCTGACCGTCAAGCAAGGACCGAAGGAAAGCTTATGGGATTACATCGCAAGATTCAGTAACGAGGTTTTGCA
GGTGGAAGGGTATGACGATGGAGTTGCACTAATTGCTGTAATTTCAAGTTTGCAGGATGAGAAGTTGCTCAATTCAATTGGAGAAAGTCAACCGCGAACGAGGAAAGAGA
GGTCAGGGGAGTGTCAGCTTTCGATAAGAGGAGAGAAGATAGAAGTAGGAGACATCGAACGGACGAAGGAAGCTAGAGTTGGCCCAAGCGCTCCAGGGCCTGTAGGAGGG
GATTCAGGTCGGAAGCGTAAAGCAGCAGCCCGAGAGGCTCACCTAGAGTCGAGGTACCAAGTATTTGAGGCCATGAAGCTTGGGAGAGGTTATCTAAAACCAATCCCCAC
ACCATTGGTGGGGTTCGAAGGGGAAAAAGTGAGCCCAAAAGGAAGCATTGAGCTCCCAGTGACCTTTGGAGAGGGACGACAGGCAGTCACAAAGATGATTAATTTCCTGG
TGGTAGACTACATCTCGACATATAACACCATATTAGGAAGGCCAACCTTGCATGAGCTCAGAGCTGTTGCATCGACTTATCACCAAGTCTTGAAATTTCCAACAGAGAGC
GGTGTAGGCATGATACGCGGCAAACAAAAAAATGTACAGAGAGTGCTACTTCACAGTATAAACAGAAAAACCCGAACAGCTCCCTGCTTAGGCAATGGTCGAGGCCAACC
AGCCTGCAAGGAAAGTCCAGAGGTTCCCCACCCGATGGAGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCCTGGAATCGGTGCAAGCCACAAATCAATCTGCTGACCGTCAAGCAAGGACCGAAGGAAAGCTTATGGGATTACATCGCAAGATTCAGTAACGAGGTTTTGCA
GGTGGAAGGGTATGACGATGGAGTTGCACTAATTGCTGTAATTTCAAGTTTGCAGGATGAGAAGTTGCTCAATTCAATTGGAGAAAGTCAACCGCGAACGAGGAAAGAGA
GGTCAGGGGAGTGTCAGCTTTCGATAAGAGGAGAGAAGATAGAAGTAGGAGACATCGAACGGACGAAGGAAGCTAGAGTTGGCCCAAGCGCTCCAGGGCCTGTAGGAGGG
GATTCAGGTCGGAAGCGTAAAGCAGCAGCCCGAGAGGCTCACCTAGAGTCGAGGTACCAAGTATTTGAGGCCATGAAGCTTGGGAGAGGTTATCTAAAACCAATCCCCAC
ACCATTGGTGGGGTTCGAAGGGGAAAAAGTGAGCCCAAAAGGAAGCATTGAGCTCCCAGTGACCTTTGGAGAGGGACGACAGGCAGTCACAAAGATGATTAATTTCCTGG
TGGTAGACTACATCTCGACATATAACACCATATTAGGAAGGCCAACCTTGCATGAGCTCAGAGCTGTTGCATCGACTTATCACCAAGTCTTGAAATTTCCAACAGAGAGC
GGTGTAGGCATGATACGCGGCAAACAAAAAAATGTACAGAGAGTGCTACTTCACAGTATAAACAGAAAAACCCGAACAGCTCCCTGCTTAGGCAATGGTCGAGGCCAACC
AGCCTGCAAGGAAAGTCCAGAGGTTCCCCACCCGATGGAGCATTAG
Protein sequenceShow/hide protein sequence
MGAWNRCKPQINLLTVKQGPKESLWDYIARFSNEVLQVEGYDDGVALIAVISSLQDEKLLNSIGESQPRTRKERSGECQLSIRGEKIEVGDIERTKEARVGPSAPGPVGG
DSGRKRKAAAREAHLESRYQVFEAMKLGRGYLKPIPTPLVGFEGEKVSPKGSIELPVTFGEGRQAVTKMINFLVVDYISTYNTILGRPTLHELRAVASTYHQVLKFPTES
GVGMIRGKQKNVQRVLLHSINRKTRTAPCLGNGRGQPACKESPEVPHPMEH