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Lag0026153 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026153
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamate receptor
Genome locationchr10:30925687..30926353
RNA-Seq ExpressionLag0026153
SyntenyLag0026153
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047903.1 retrotransposon polyprotein [Cucumis melo var. makuwa]3.0e-1050Show/hide
Query:  ATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAG-KMLEPNPLYEEWTTVN
        A   S++FGH LS+VL VKLDE NY L   MV+++L  QK+DG++LGTK +PSK I  + E G  M   N  +EEW  V+
Subjt:  ATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAG-KMLEPNPLYEEWTTVN

KGN65642.1 hypothetical protein Csa_019906 [Cucumis sativus]4.0e-1052.17Show/hide
Query:  SASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEA
        S +++   T +++SFGHPL T L++KLD+  + L RGMVLA+LRGQKVDGY+LG K+QP + ++ + EA
Subjt:  SASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEA

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]4.4e-1754.55Show/hide
Query:  SSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAGKMLEP--NPLYEEWTTVNQTLSG
        S S T ++  +T  + ++ SFGHPLST LTVKLD+ NY L +GMVLA+L GQKVDGY+L TK  PSK+   +++ G MLEP  NP YEEW+ V+Q   G
Subjt:  SSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAGKMLEP--NPLYEEWTTVNQTLSG

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]1.9e-1248.15Show/hide
Query:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT
        + +SS        ++      +   ++SFGHPL TVLTVKLD+ NY L RGMVLA+LRGQK DGY+LGT A+P +F+ VS E       L+ NP Y EW 
Subjt:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT

Query:  TVNQTLSG
         V+Q L G
Subjt:  TVNQTLSG

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]1.9e-1248.15Show/hide
Query:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT
        + +SS        ++      +   ++SFGHPL TVLTVKLD+ NY L RGMVLA+LRGQK DGY+LGT A+P +F+ VS E       L+ NP Y EW 
Subjt:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT

Query:  TVNQTLSG
         V+Q L G
Subjt:  TVNQTLSG

TrEMBL top hitse value%identityAlignment
A0A0A0LXU0 Uncharacterized protein1.9e-1052.17Show/hide
Query:  SASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEA
        S +++   T +++SFGHPL T L++KLD+  + L RGMVLA+LRGQKVDGY+LG K+QP + ++ + EA
Subjt:  SASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEA

A0A5A7TWE0 Retrotransposon polyprotein1.5e-1050Show/hide
Query:  ATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAG-KMLEPNPLYEEWTTVN
        A   S++FGH LS+VL VKLDE NY L   MV+++L  QK+DG++LGTK +PSK I  + E G  M   N  +EEW  V+
Subjt:  ATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAG-KMLEPNPLYEEWTTVN

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like2.1e-1754.55Show/hide
Query:  SSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAGKMLEP--NPLYEEWTTVNQTLSG
        S S T ++  +T  + ++ SFGHPLST LTVKLD+ NY L +GMVLA+L GQKVDGY+L TK  PSK+   +++ G MLEP  NP YEEW+ V+Q   G
Subjt:  SSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTEAGKMLEP--NPLYEEWTTVNQTLSG

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X29.2e-1348.15Show/hide
Query:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT
        + +SS        ++      +   ++SFGHPL TVLTVKLD+ NY L RGMVLA+LRGQK DGY+LGT A+P +F+ VS E       L+ NP Y EW 
Subjt:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT

Query:  TVNQTLSG
         V+Q L G
Subjt:  TVNQTLSG

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X19.2e-1348.15Show/hide
Query:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT
        + +SS        ++      +   ++SFGHPL TVLTVKLD+ NY L RGMVLA+LRGQK DGY+LGT A+P +F+ VS E       L+ NP Y EW 
Subjt:  SSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVSTE---AGKMLEPNPLYEEWT

Query:  TVNQTLSG
         V+Q L G
Subjt:  TVNQTLSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTGTTTTCTTCCATGCACGCCATGGCCACTTTATTTCTGTTAGAACTCAGAGCACCAGCGATCACCATGACCAGTGGTGGGTCTTCTTCCTCTTCTTCCGCATC
TGCGTCTTCTTCTGCAACAATTTCAGCTTCTGTCTCTACTGCTGCAACTGTGGTGAGTTCTTCCTTTGGCCATCCGTTGAGTACTGTTCTCACTGTGAAGCTCGACGAGA
ATAATTATTTGCTTGGGAGAGGAATGGTTCTAGCTATTCTTCGAGGTCAGAAGGTCGATGGCTATATTCTTGGGACTAAAGCCCAGCCATCAAAGTTTATCGAGGTTTCA
ACTGAAGCCGGGAAAATGTTAGAGCCGAATCCACTCTATGAAGAATGGACGACAGTGAATCAAACGTTGTCTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTGTTTTCTTCCATGCACGCCATGGCCACTTTATTTCTGTTAGAACTCAGAGCACCAGCGATCACCATGACCAGTGGTGGGTCTTCTTCCTCTTCTTCCGCATC
TGCGTCTTCTTCTGCAACAATTTCAGCTTCTGTCTCTACTGCTGCAACTGTGGTGAGTTCTTCCTTTGGCCATCCGTTGAGTACTGTTCTCACTGTGAAGCTCGACGAGA
ATAATTATTTGCTTGGGAGAGGAATGGTTCTAGCTATTCTTCGAGGTCAGAAGGTCGATGGCTATATTCTTGGGACTAAAGCCCAGCCATCAAAGTTTATCGAGGTTTCA
ACTGAAGCCGGGAAAATGTTAGAGCCGAATCCACTCTATGAAGAATGGACGACAGTGAATCAAACGTTGTCTGGCTAG
Protein sequenceShow/hide protein sequence
MVVFSSMHAMATLFLLELRAPAITMTSGGSSSSSSASASSSATISASVSTAATVVSSSFGHPLSTVLTVKLDENNYLLGRGMVLAILRGQKVDGYILGTKAQPSKFIEVS
TEAGKMLEPNPLYEEWTTVNQTLSG