| GenBank top hits | e value | %identity | Alignment |
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| KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-63 | 49.71 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
M+V T KS SK K + +H TL+ER+KK YPFPD D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRVI H VE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSNLATIKEKSK--------HQRNK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKKKENL
I KLA+E KIELD+DEVAQ+N + S QR +P ++ ++K SQ ++ + L +SF + ++ E
Subjt: ILKLAKERKIELDLDEVAQSNLATIKEKSK--------HQRNK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKKKENL
Query: A--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPK
A T+ + V EE+DNS + +QRTSVFD IKP TTR SVF R+SMA +EE QC T + SAF+RLS+S SKK R ST FDRLK+TNDQ +
Subjt: A--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPK
Query: RKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLINTEGSL
R+M LK K F E N D+K+HS +PSRMKRK SV INTEGSL
Subjt: RKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLINTEGSL
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| KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.5e-66 | 44.44 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
M+V T KS SK K + + +H TL+ER+KK YPFPD D+ DMLEQL+E QLI+LPKCKRPE+ KVDDP YCKYHRVI H VE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSN-------------------------------------------------------------------------------
ILKL +E KIELD+DEVAQ+N
Subjt: ILKLAKERKIELDLDEVAQSN-------------------------------------------------------------------------------
Query: -----LATIKEKSKHQRNKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVFDRIK
I K K +RNK K +P + + + F QP+Q + L + F ++F KE L + C + EEVDNS + +QRTSVFDRIK
Subjt: -----LATIKEKSKHQRNKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVFDRIK
Query: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
P TTR SVF R+S+ EEE QC ST TR SAF+ LS+STSKK R STS FDRLK+ NDQ +R+M +LK+K F E N D+K+HS +PSRMKRK SV IN
Subjt: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
Query: TEGSL
TEGSL
Subjt: TEGSL
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| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-66 | 54.11 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
MVV+ T KS SK K H TLKER++K YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
ILKLA+E+KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + + + N +S +EV+NS +
Subjt: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
Query: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
QRTSVFDRIKP TTR SVF R+S+A EEE QC TR S +RLS+ST KK R STS FDRLK+TNDQ +R+M + K K F E N D+K+HS +PS
Subjt: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
Query: RMKRKFSVLINTEGSL
RMKRK V INTEGSL
Subjt: RMKRKFSVLINTEGSL
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| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.4e-63 | 52.85 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
MVV T KS SK K + +H TL+ER+KK YPFPD D+ DMLEQL+E QLI+L CKRP + KVDDP YCKYHRVI HPVE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
ILKLA+E KI+LD+DE + KD LQP+R RS P++++ + + + + +N SY EEVDNS +
Subjt: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
Query: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
+QRTSVFDRIKP TTR VF R+SMA EEE QC ST TR SAF+RLS+STSKK R STS FDRLK+ NDQ +R+M +LK K F E N D+K+HS IPS
Subjt: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
Query: RMKRKFSVLINTEGSL
RK SV IN EGSL
Subjt: RMKRKFSVLINTEGSL
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| TYK04576.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.2e-63 | 43.58 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
MVV+ T KS SK K H TLKER+KK YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRNKD---------------PKKLQ-----
ILKLA+E+KIELD+DEVAQ+N + TI ++K KD P +Q
Subjt: ILKLAKERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRNKD---------------PKKLQ-----
Query: ------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVFDRIK
K +R+KK F Q ++ + L + ++F H ++ + + ++ EVD NS + QRTSVFDRIK
Subjt: ------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVFDRIK
Query: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
P TTR SVF R+SMA EEE QC TR S F+RLS+STSKK R STS FDRLK+ NDQ +R+M +LK K F E N D+K+HS +PSRMKRK SV IN
Subjt: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
Query: TEGSLKFLLSKFE
TEG++ LL +
Subjt: TEGSLKFLLSKFE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRE2 Ty3-gypsy retrotransposon protein | 1.3e-63 | 49.71 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
M+V T KS SK K + +H TL+ER+KK YPFPD D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRVI H VE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSNLATIKEKSK--------HQRNK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKKKENL
I KLA+E KIELD+DEVAQ+N + S QR +P ++ ++K SQ ++ + L +SF + ++ E
Subjt: ILKLAKERKIELDLDEVAQSNLATIKEKSK--------HQRNK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKKKENL
Query: A--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPK
A T+ + V EE+DNS + +QRTSVFD IKP TTR SVF R+SMA +EE QC T + SAF+RLS+S SKK R ST FDRLK+TNDQ +
Subjt: A--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPK
Query: RKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLINTEGSL
R+M LK K F E N D+K+HS +PSRMKRK SV INTEGSL
Subjt: RKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLINTEGSL
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| A0A5A7TGM1 Retrotransposon gag protein | 7.2e-67 | 44.44 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
M+V T KS SK K + + +H TL+ER+KK YPFPD D+ DMLEQL+E QLI+LPKCKRPE+ KVDDP YCKYHRVI H VE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSN-------------------------------------------------------------------------------
ILKL +E KIELD+DEVAQ+N
Subjt: ILKLAKERKIELDLDEVAQSN-------------------------------------------------------------------------------
Query: -----LATIKEKSKHQRNKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVFDRIK
I K K +RNK K +P + + + F QP+Q + L + F ++F KE L + C + EEVDNS + +QRTSVFDRIK
Subjt: -----LATIKEKSKHQRNKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVFDRIK
Query: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
P TTR SVF R+S+ EEE QC ST TR SAF+ LS+STSKK R STS FDRLK+ NDQ +R+M +LK+K F E N D+K+HS +PSRMKRK SV IN
Subjt: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
Query: TEGSL
TEGSL
Subjt: TEGSL
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| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 7.2e-67 | 54.11 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
MVV+ T KS SK K H TLKER++K YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
ILKLA+E+KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + + + N +S +EV+NS +
Subjt: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
Query: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
QRTSVFDRIKP TTR SVF R+S+A EEE QC TR S +RLS+ST KK R STS FDRLK+TNDQ +R+M + K K F E N D+K+HS +PS
Subjt: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
Query: RMKRKFSVLINTEGSL
RMKRK V INTEGSL
Subjt: RMKRKFSVLINTEGSL
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| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 1.7e-63 | 52.85 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
MVV T KS SK K + +H TL+ER+KK YPFPD D+ DMLEQL+E QLI+L CKRP + KVDDP YCKYHRVI HPVE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
ILKLA+E KI+LD+DE + KD LQP+R RS P++++ + + + + +N SY EEVDNS +
Subjt: ILKLAKERKIELDLDEVAQSNLATIKEKSKHQRNKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKS
Query: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
+QRTSVFDRIKP TTR VF R+SMA EEE QC ST TR SAF+RLS+STSKK R STS FDRLK+ NDQ +R+M +LK K F E N D+K+HS IPS
Subjt: EQRTSVFDRIKPPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPS
Query: RMKRKFSVLINTEGSL
RK SV IN EGSL
Subjt: RMKRKFSVLINTEGSL
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| A0A5D3C2C8 Retrotransposon gag protein | 5.7e-64 | 43.58 | Show/hide |
Query: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
MVV+ T KS SK K H TLKER+KK YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+L
Subjt: MVVNTTLHKSSSKGKRQTNVTHH-------LTLKERRKKSYPFPDDDIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDL
Query: ILKLAKERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRNKD---------------PKKLQ-----
ILKLA+E+KIELD+DEVAQ+N + TI ++K KD P +Q
Subjt: ILKLAKERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRNKD---------------PKKLQ-----
Query: ------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVFDRIK
K +R+KK F Q ++ + L + ++F H ++ + + ++ EVD NS + QRTSVFDRIK
Subjt: ------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVFDRIK
Query: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
P TTR SVF R+SMA EEE QC TR S F+RLS+STSKK R STS FDRLK+ NDQ +R+M +LK K F E N D+K+HS +PSRMKRK SV IN
Subjt: PPTTRPSVFHRMSMAATEEETQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLKLKLFDEVNSDNKLHSSIPSRMKRKFSVLIN
Query: TEGSLKFLLSKFE
TEG++ LL +
Subjt: TEGSLKFLLSKFE
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