| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0053863.1 DNA-directed RNA polymerase V subunit 5A [Cucumis melo var. makuwa] | 2.9e-96 | 61.05 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPN VE G+CLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+N DIDLSLQQFR+I+GQ PDVDRLKL A H SDPSKR+LV+FCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYYGLEKGQVVKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSHNSLYLLGFQCR-FHDYRLCKKFVSTITADMSKRVL
YDGDMT +H GF+ + F K+ VSTITA M +VL
Subjt: YDGDMTRSHNSLYLLGFQCR-FHDYRLCKKFVSTITADMSKRVL
|
|
| XP_022158561.1 DNA-directed RNA polymerase V subunit 5A [Momordica charantia] | 3.5e-97 | 66.67 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPNRVELG+CLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT SD DL+LQQFREIYGQSPDVDRLKLSAVH SDPSKRILVIFCGTG+V
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAV+LFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYYGLEKGQVVKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMT SH
Subjt: YDGDMTRSH
|
|
| XP_022971518.1 DNA-directed RNA polymerase V subunit 5A isoform X2 [Cucurbita maxima] | 3.8e-96 | 65.37 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+NPSDIDL+LQQFREIYGQ PDVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYY LEKGQ+VKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMTRSH
Subjt: YDGDMTRSH
|
|
| XP_023539155.1 DNA-directed RNA polymerase V subunit 5A [Cucurbita pepo subsp. pepo] | 5.9e-97 | 65.7 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+NPSDIDL+LQQFREIYGQ PDVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYYGLEKGQ+VKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMTRSH
Subjt: YDGDMTRSH
|
|
| XP_038903402.1 DNA-directed RNA polymerase V subunit 5A [Benincasa hispida] | 9.1e-98 | 66.34 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPN VE G+CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYT+N SDIDLSLQQFREIYGQSPDVDRLKLSAVH SDPSKR+LVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVL+EEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLR DA+ARYYGLEKGQVVKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMTRSH
Subjt: YDGDMTRSH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3DQJ3 DNA-directed RNA polymerase V subunit 5A | 1.4e-96 | 61.05 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPN VE G+CLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+N DIDLSLQQFR+I+GQ PDVDRLKL A H SDPSKR+LV+FCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYYGLEKGQVVKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSHNSLYLLGFQCR-FHDYRLCKKFVSTITADMSKRVL
YDGDMT +H GF+ + F K+ VSTITA M +VL
Subjt: YDGDMTRSHNSLYLLGFQCR-FHDYRLCKKFVSTITADMSKRVL
|
|
| A0A6J1E191 DNA-directed RNA polymerase V subunit 5A | 1.7e-97 | 66.67 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPNRVELG+CLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT SD DL+LQQFREIYGQSPDVDRLKLSAVH SDPSKRILVIFCGTG+V
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAV+LFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYYGLEKGQVVKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMT SH
Subjt: YDGDMTRSH
|
|
| A0A6J1GHB9 DNA-directed RNA polymerase V subunit 5A isoform X1 | 3.2e-96 | 65.37 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+NPSDIDL+LQQFREIYGQ DVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYYGLEKGQ+VKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMTRSH
Subjt: YDGDMTRSH
|
|
| A0A6J1I260 DNA-directed RNA polymerase V subunit 5A isoform X1 | 1.9e-96 | 65.37 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+NPSDIDL+LQQFREIYGQ PDVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYY LEKGQ+VKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMTRSH
Subjt: YDGDMTRSH
|
|
| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 1.9e-96 | 65.37 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+NPSDIDL+LQQFREIYGQ PDVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEV
Query: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
LPRMLRTDAIARYY LEKGQ+VKV+
Subjt: TQSMDLLHRNTEAHQLLFKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVS
Query: YDGDMTRSH
YDGDMTRSH
Subjt: YDGDMTRSH
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.4e-16 | 31.52 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDR-----LKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLIL
E++R + R+TVL+M+ DRGY V ++D L+ F+E +G P + L + H DP+ ++ V F + + I+ I Q + + + I+
Subjt: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDR-----LKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLIL
Query: IVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
+VQ +T A +++ + + +E F +L+VNIT+H L P H V+T EEK +LL +Y +++ Q
Subjt: IVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 3.1e-16 | 32.5 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
E R + ++T+++MLRDRGY + S++ ++ QQF +G + + L +D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LL++Y+++E Q
Subjt: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
|
|
| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 1.4e-37 | 44.71 | Show/hide |
Query: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
+C+S D G ES R++L+R T EMLRDRGY VN +++ L+L +FR ++G+ P+++RL++ SDP K+ILV+F GT + V ++R + QI N
Subjt: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
Query: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQ
Subjt: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
|
|
| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 2.9e-62 | 44.37 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
CLS Y+D + ESHRY+L+RR L+MLRDRGY V+ DI+LSL FR +YG+ PDVDRL++SA+H SD +K++ ++F GT VKVNAIR++ I++++T
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLL
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQ
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLL
Query: FKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHNSLYLLGF
LPR+ + DAI RYYGLEKGQVVKV+Y G++T SH + F
Subjt: FKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHNSLYLLGF
Query: QC
+C
Subjt: QC
|
|
| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 4.4e-55 | 42.16 | Show/hide |
Query: IDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
I + E H+Y+L+RRT +EMLRDRGY V+ DI+LSLQQFR +YG+ PDVD L++SA H D SK+I V+FCGTG VKVNA+R IA +++++ + GLI
Subjt: IDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLLFKFSW
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQ
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLLFKFSW
Query: MIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSH
LPR+ D I RYYGLE GQV+KV+Y +++ SH
Subjt: MIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSH
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 3.2e-56 | 42.16 | Show/hide |
Query: IDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
I + E H+Y+L+RRT +EMLRDRGY V+ DI+LSLQQFR +YG+ PDVD L++SA H D SK+I V+FCGTG VKVNA+R IA +++++ + GLI
Subjt: IDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLLFKFSW
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQ
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLLFKFSW
Query: MIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSH
LPR+ D I RYYGLE GQV+KV+Y +++ SH
Subjt: MIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSH
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.2e-17 | 32.5 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
E R + ++T+++MLRDRGY + S++ ++ QQF +G + + L +D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LL++Y+++E Q
Subjt: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.0e-38 | 44.71 | Show/hide |
Query: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
+C+S D G ES R++L+R T EMLRDRGY VN +++ L+L +FR ++G+ P+++RL++ SDP K+ILV+F GT + V ++R + QI N
Subjt: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
Query: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQ
Subjt: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.0e-63 | 44.37 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
CLS Y+D + ESHRY+L+RR L+MLRDRGY V+ DI+LSL FR +YG+ PDVDRL++SA+H SD +K++ ++F GT VKVNAIR++ I++++T
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLL
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQ
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQGSSDSGHPIKKEEVTQSMDLLHRNTEAHQLL
Query: FKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHNSLYLLGF
LPR+ + DAI RYYGLEKGQVVKV+Y G++T SH + F
Subjt: FKFSWMIYGRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHNSLYLLGF
Query: QC
+C
Subjt: QC
|
|
| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 6.0e-15 | 33.13 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQS---PDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIV
E R F RRTVL+MLRDRGYT+ SD++L ++F + + ++ + + L +SA +P+ +I V + V V I+ + D +H I++V
Subjt: ESHRYFLSRRTVLEMLRDRGYTVNPSDIDLSLQQFREIYGQS---PDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIV
Query: QNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
IT A AV + +E+F+ +L+ NIT+H L + VL ++ K+KLL Y++++ Q
Subjt: QNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
|
|
