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Lag0026166 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026166
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr10:31236744..31237151
RNA-Seq ExpressionLag0026166
SyntenyLag0026166
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR015410 - Domain of unknown function DUF1985


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]3.7e-3257.66Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE+FL+P+Q+   VD +HIIMV+D+E+F+GYPWGR+AF++LV+FM + + S+G TGISMGGFIFPIL+W YE++P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFF  +
Subjt:  LSNPQNFFARK

KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]9.1e-3156.76Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE FL+P+Q+ + VD ++IIMV+D+E+F+GYPWGR+AF++LV+FM +A+ S+G TGIS+ GFIFPIL+W YE++P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFFA +
Subjt:  LSNPQNFFARK

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]4.8e-3258.93Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISM-GGFIFPILSWTYEIMP
        +N+ F IS +  +DD++KM  LYFLE+FL+P+Q+ + VD +HIIMV+D+E+F+GYPWGR+AF++LV+FM +A+ S+G TGISM GGFIFPIL+W YE++P
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISM-GGFIFPILSWTYEIMP

Query:  ILSNPQNFFARK
         LS P NFFA +
Subjt:  ILSNPQNFFARK

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]9.1e-3156.76Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE FL+P+Q+ + VD ++IIMV+D+E+F+GYPWGR+AF++LV+FM +A+ S+G TGIS+ GFIFPIL+W YE++P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFFA +
Subjt:  LSNPQNFFARK

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]7.7e-3055.86Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE+FL+P+Q+ + VD +HIIMV+D+E+F+GYPWGR+AF++LV+FM + + S+G TGIS+ GFIF IL+W YE+ P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFFA +
Subjt:  LSNPQNFFARK

TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like1.8e-3257.66Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE+FL+P+Q+   VD +HIIMV+D+E+F+GYPWGR+AF++LV+FM + + S+G TGISMGGFIFPIL+W YE++P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFF  +
Subjt:  LSNPQNFFARK

A0A5A7U6E1 Protein Ycf2-like3.7e-3055.86Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE+FL+P+Q+ + VD +HIIMV+D+E+F+GYPWGR+AF++LV+FM + + S+G TGIS+ GFIF IL+W YE+ P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFFA +
Subjt:  LSNPQNFFARK

A0A5A7UD30 Protein Ycf2-like4.4e-3156.76Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE FL+P+Q+ + VD ++IIMV+D+E+F+GYPWGR+AF++LV+FM +A+ S+G TGIS+ GFIFPIL+W YE++P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFFA +
Subjt:  LSNPQNFFARK

A0A5D3CEX9 Protein Ycf2-like2.3e-3258.93Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISM-GGFIFPILSWTYEIMP
        +N+ F IS +  +DD++KM  LYFLE+FL+P+Q+ + VD +HIIMV+D+E+F+GYPWGR+AF++LV+FM +A+ S+G TGISM GGFIFPIL+W YE++P
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISM-GGFIFPILSWTYEIMP

Query:  ILSNPQNFFARK
         LS P NFFA +
Subjt:  ILSNPQNFFARK

A0A5D3DCN3 Protein Ycf2-like4.4e-3156.76Show/hide
Query:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI
        +N+ F IS +  +DD++KM  LYFLE FL+P+Q+ + VD ++IIMV+D+E+F+GYPWGR+AF++LV+FM +A+ S+G TGIS+ GFIFPIL+W YE++P 
Subjt:  INMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPI

Query:  LSNPQNFFARK
        LS P NFFA +
Subjt:  LSNPQNFFARK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07240.1 cysteine-type peptidases;cysteine-type peptidases4.8e-0625.96Show/hide
Query:  VISKSVIEDDQLKM--VLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMK-KALQSRGATGISMGGFIFPILSWTYEIMP-IL
        ++ K V+ D ++++    L  ++ FLLP      +  +H  M  D + F  YPWGRL+F++++  +K + ++    T +++ G ++ +     E +P I 
Subjt:  VISKSVIEDDQLKM--VLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMK-KALQSRGATGISMGGFIFPILSWTYEIMP-IL

Query:  SNPQ
          PQ
Subjt:  SNPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAAATATGGCATTTGTCATAAGCAAGAGTGTCATAGAGGATGACCAATTAAAGATGGTCTTACTGTATTTCTTGGAAAATTTCCTACTCCCTCGACAGGACAC
AGTTCACGTAGACATGAACCATATAATCATGGTTAATGATGAGGAATTATTCAATGGGTATCCGTGGGGAAGGTTAGCATTTGACATATTGGTTGAGTTCATGAAAAAAG
CCTTACAGAGCAGGGGAGCCACGGGAATATCTATGGGGGGCTTCATATTTCCCATATTATCATGGACTTATGAAATTATGCCTATACTAAGCAACCCACAGAATTTCTTT
GCAAGGAAGTTCCAAGGATTGTCAATTGGTTGGCAGACACACAGCCGAAATGGAAGGACCTCGAAGAAGAGTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAAATATGGCATTTGTCATAAGCAAGAGTGTCATAGAGGATGACCAATTAAAGATGGTCTTACTGTATTTCTTGGAAAATTTCCTACTCCCTCGACAGGACAC
AGTTCACGTAGACATGAACCATATAATCATGGTTAATGATGAGGAATTATTCAATGGGTATCCGTGGGGAAGGTTAGCATTTGACATATTGGTTGAGTTCATGAAAAAAG
CCTTACAGAGCAGGGGAGCCACGGGAATATCTATGGGGGGCTTCATATTTCCCATATTATCATGGACTTATGAAATTATGCCTATACTAAGCAACCCACAGAATTTCTTT
GCAAGGAAGTTCCAAGGATTGTCAATTGGTTGGCAGACACACAGCCGAAATGGAAGGACCTCGAAGAAGAGTATTTGA
Protein sequenceShow/hide protein sequence
MDINMAFVISKSVIEDDQLKMVLLYFLENFLLPRQDTVHVDMNHIIMVNDEELFNGYPWGRLAFDILVEFMKKALQSRGATGISMGGFIFPILSWTYEIMPILSNPQNFF
ARKFQGLSIGWQTHSRNGRTSKKSI