; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026172 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026172
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor bHLH48
Genome locationchr10:31295965..31299284
RNA-Seq ExpressionLag0026172
SyntenyLag0026172
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR024097 - Basic helix-loop-helix leucine zipper transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596223.1 Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4365.68Show/hide
Query:  VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA-----------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAK
        V  DD VH+R+KDV KPYFSA NCNLTFPTNS L E   KFSV+A           LNSSV+LEKVKNEP  ETDSNPNHL   I D  VENNTNQRSAK
Subjt:  VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA-----------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAK

Query:  RKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        RKERE+KGKGSSKKSKNE  EDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  RKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

XP_004136583.1 transcription factor bHLH48 [Cucumis sativus]1.3e-4770.18Show/hide
Query:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS
        AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK SVLA            LNSSVNLEKVKNEP T+TDSNPN LQTLI D  VE NTNQRS
Subjt:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS

Query:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        AKRKERE+KG+GS+KKSKNE NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

XP_008443095.1 PREDICTED: transcription factor bHLH48 [Cucumis melo]4.8e-4769.01Show/hide
Query:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS
        AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK S+LA            LNSSVN EKVKNEP T+TDSNPN LQTLI D  VE NTNQRS
Subjt:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS

Query:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        AKRKERE+KG+GS+KKSKNE NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

XP_022931797.1 transcription factor bHLH48-like [Cucurbita moschata]4.2e-4364.71Show/hide
Query:  VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSA
        V  DD VH+R+KDV KPYFSA NCNLTFPTNS L E   KFSV+A            LNSSV+LEKVKNEP  ETDSNPNHL   I D  VENNTNQRS 
Subjt:  VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSA

Query:  KRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        KRKERE+KGKGSSKKSKNE  EDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  KRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

XP_038906343.1 transcription factor bHLH48-like [Benincasa hispida]9.7e-4870.76Show/hide
Query:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS
        AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIERA K SVLA            LNSSVNLEKVKNEP TETDSNPN LQTLI D  VE N NQRS
Subjt:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS

Query:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        AKRKERE+KGKGS+KKSKNE NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

TrEMBL top hitse value%identityAlignment
A0A0A0LEI6 BHLH domain-containing protein6.1e-4870.18Show/hide
Query:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS
        AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK SVLA            LNSSVNLEKVKNEP T+TDSNPN LQTLI D  VE NTNQRS
Subjt:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS

Query:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        AKRKERE+KG+GS+KKSKNE NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

A0A1S3B815 transcription factor bHLH482.3e-4769.01Show/hide
Query:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS
        AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK S+LA            LNSSVN EKVKNEP T+TDSNPN LQTLI D  VE NTNQRS
Subjt:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS

Query:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        AKRKERE+KG+GS+KKSKNE NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

A0A5D3DPK9 Transcription factor bHLH482.3e-4769.01Show/hide
Query:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS
        AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK S+LA            LNSSVN EKVKNEP T+TDSNPN LQTLI D  VE NTNQRS
Subjt:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRS

Query:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        AKRKERE+KG+GS+KKSKNE NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  AKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

A0A6J1EUQ6 transcription factor bHLH48-like2.0e-4364.71Show/hide
Query:  VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSA
        V  DD VH+R+KDV KPYFSA NCNLTFPTNS L E   KFSV+A            LNSSV+LEKVKNEP  ETDSNPNHL   I D  VENNTNQRS 
Subjt:  VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSA

Query:  KRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        KRKERE+KGKGSSKKSKNE  EDAEK PYV                   RR+KINARMKLLQELVP CNK
Subjt:  KRKEREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

A0A6J1J6J4 transcription factor bHLH482.0e-3864.07Show/hide
Query:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLALNSS--------VNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRK
        AVV DD        V KPYFSAFNCNLTFPTNS LIERA KFSVLA   S        +NLEKVKNEP TETDSNPN LQTLI D  VE NTNQR  KRK
Subjt:  AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLALNSS--------VNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRK

Query:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        ERE+KGKGS+KKSKNE +E AEK PY+                   RR+KINARMKLLQELVP CNK
Subjt:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

SwissProt top hitse value%identityAlignment
Q3EAI1 Transcription factor bHLH602.8e-1843.71Show/hide
Query:  LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRK
        + P   +F   L FP+NS L+ERA +FSV+A                   NSS NL++VK EP  ETDS+    Q LI DS +EN     N N R+ KRK
Subjt:  LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRK

Query:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        + E+KGK S+K  KN+ +E+ EK PYV                   RR+KINARMKLLQELVP C+K
Subjt:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

Q8VZ02 Transcription factor bHLH481.0e-1242.67Show/hide
Query:  LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEG
        LTFP+NS L++RA +FSV+A                 N   NL++VK EP  ET            DSMVEN N +  S KRKERE+K K S+K  KN+ 
Subjt:  LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEG

Query:  NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        + +++K PYV                   RR+KINARMKLLQELVP C+K
Subjt:  NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

Arabidopsis top hitse value%identityAlignment
AT2G42300.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.5e-1442.67Show/hide
Query:  LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEG
        LTFP+NS L++RA +FSV+A                 N   NL++VK EP  ET            DSMVEN N +  S KRKERE+K K S+K  KN+ 
Subjt:  LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEG

Query:  NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        + +++K PYV                   RR+KINARMKLLQELVP C+K
Subjt:  NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

AT2G42300.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.7e-1442.21Show/hide
Query:  LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEG
        LTFP+NS L++RA +FSV+A                 N   NL++VK EP  ET            DSMVEN N +  S KRKERE+K K S+K  KN+ 
Subjt:  LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEG

Query:  NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNKEKKG
        + +++K PYV                   RR+KINARMKLLQELVP C+K   G
Subjt:  NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNKEKKG

AT3G57800.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-1943.71Show/hide
Query:  LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRK
        + P   +F   L FP+NS L+ERA +FSV+A                   NSS NL++VK EP  ETDS+    Q LI DS +EN     N N R+ KRK
Subjt:  LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRK

Query:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        + E+KGK S+K  KN+ +E+ EK PYV                   RR+KINARMKLLQELVP C+K
Subjt:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK

AT3G57800.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-1943.71Show/hide
Query:  LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRK
        + P   +F   L FP+NS L+ERA +FSV+A                   NSS NL++VK EP  ETDS+    Q LI DS +EN     N N R+ KRK
Subjt:  LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRK

Query:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK
        + E+KGK S+K  KN+ +E+ EK PYV                   RR+KINARMKLLQELVP C+K
Subjt:  EREEKGKGSSKKSKNEGNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATCCTCCTAGGGATCCTCAAGTGATGGAATTTAAGAGAGAAAGCTTGAAGAACAAACATATGGAGGTGGGTTTGATTGTATTTCTCTTTGATTCGACTCCATT
TCCTCTCTCATCGATCGATTGGCTCTGCAGTCCCACATTTGAGGAGTTGGGTTTTACTGGGAATTTGGGTGGATTGATAGGATTTTCCATTTGGGAATTTGAGCTCCTTC
ACTGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTAGCCGGATTTCGACAGTGGCACCGAACGGCCGTTGTGAACGATGACCCCGTTCACCACCGT
ATCAAAGATGTGCTGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACCTTCCCGACGAACTCGACTCTAATCGAACGTGCCACCAAGTTCTCGGTCTTGGCGTTGAA
TTCGAGCGTCAATTTGGAGAAAGTGAAGAACGAGCCCATCACTGAAACCGATTCGAATCCTAATCACTTGCAGACTTTAATCTTCGATTCGATGGTGGAGAACAACACGA
ACCAGAGATCGGCAAAGAGGAAGGAGCGAGAGGAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAAGGCAATGAAGATGCTGAAAAGTTTCCTTACGTTTGGCCT
AGGAGAGATAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTAGATGCAATAAGGAGAAGAAAGGAGAAGAAAAGAAAAGAAAAAAAAAGTTACAGTCGCC
GGCGGCGACGAGTGGTGGCCGGTTGCCGGTCGCCGGCAAGGAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATCCTCCTAGGGATCCTCAAGTGATGGAATTTAAGAGAGAAAGCTTGAAGAACAAACATATGGAGGTGGGTTTGATTGTATTTCTCTTTGATTCGACTCCATT
TCCTCTCTCATCGATCGATTGGCTCTGCAGTCCCACATTTGAGGAGTTGGGTTTTACTGGGAATTTGGGTGGATTGATAGGATTTTCCATTTGGGAATTTGAGCTCCTTC
ACTGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTAGCCGGATTTCGACAGTGGCACCGAACGGCCGTTGTGAACGATGACCCCGTTCACCACCGT
ATCAAAGATGTGCTGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACCTTCCCGACGAACTCGACTCTAATCGAACGTGCCACCAAGTTCTCGGTCTTGGCGTTGAA
TTCGAGCGTCAATTTGGAGAAAGTGAAGAACGAGCCCATCACTGAAACCGATTCGAATCCTAATCACTTGCAGACTTTAATCTTCGATTCGATGGTGGAGAACAACACGA
ACCAGAGATCGGCAAAGAGGAAGGAGCGAGAGGAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAAGGCAATGAAGATGCTGAAAAGTTTCCTTACGTTTGGCCT
AGGAGAGATAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTAGATGCAATAAGGAGAAGAAAGGAGAAGAAAAGAAAAGAAAAAAAAAGTTACAGTCGCC
GGCGGCGACGAGTGGTGGCCGGTTGCCGGTCGCCGGCAAGGAGATTTGA
Protein sequenceShow/hide protein sequence
MSDPPRDPQVMEFKRESLKNKHMEVGLIVFLFDSTPFPLSSIDWLCSPTFEELGFTGNLGGLIGFSIWEFELLHCTSGTSGDAGFRASPLAGFRQWHRTAVVNDDPVHHR
IKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLALNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNEGNEDAEKFPYVWP
RRDKINARMKLLQELVPRCNKEKKGEEKKRKKKLQSPAATSGGRLPVAGKEI