; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026175 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026175
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:31495729..31499573
RNA-Seq ExpressionLag0026175
SyntenyLag0026175
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]5.1e-5053.97Show/hide
Query:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS
        GP    S RK KA VREAR      ++Y  ++A     +EF+E EA ++  PHNDALV+TL +AN K+HRIL+DGGSS D+ SLT +KAM L  E+LK S
Subjt:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS

Query:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        LTPL+GFGGE +  +G IELP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++ I STY   +KFPTP GVG  KGEQ+ SR+
Subjt:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]2.5e-4954.74Show/hide
Query:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP
        GGP    S RK KA VREAR   E  ++Y  ++A     +EF++    ++  PHNDAL++TL +AN K+HRIL+DGGSSAD +SLT +KAM L +E LK 
Subjt:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP

Query:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        SLTPL+GFGGE V   G IELPVTF  G  ++TKM++FLVVD  S+YNAIL R T++ +K I STY   +KFPTP GVG  KGEQ+  R+
Subjt:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]4.9e-5355.84Show/hide
Query:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS
        GP    S RK KA VREAR   +  ++Y  ++      +EF+E EA ++  PHNDALV+TL +ANVK+HRIL+DGGSSAD++S T +KAM L  ++LK S
Subjt:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS

Query:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRDIQKCAQDD
          PLVGFGGE V LEG IELPVTFG G  +VTKM++FLVV+  S+YNAILGRPT+H +K I STY    KFPT  GVG  KGEQ+ SR+    +  D
Subjt:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRDIQKCAQDD

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]2.5e-4957.78Show/hide
Query:  KMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPSLTPLVGFGG
        K KA VREAR   E  ++Y  ++      +EF+E EA  +   HNDALV+TL +ANVK+HRIL+DGGSSAD++S T +KAM LE ++LK S  PLVGFGG
Subjt:  KMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPSLTPLVGFGG

Query:  ESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        E V  EG IELPVTFG G   VTKM++FLVV+  S+YN ILGR T+H +KVI STY   +KFPTP GV   KGEQ+ SR+
Subjt:  ESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]5.1e-5056.32Show/hide
Query:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP
        GGP    S RK KA VREAR       +Y  ++A     +EF+E EA ++  PHNDALV+TL +ANVK+HRIL+DGGSSAD++S TT+K M L  ++LK 
Subjt:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP

Query:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        S  PL+GFG E V  EG IEL VTFG G  +VTKM++FLVVD  S+YNAILGR T+H +K I STY   +KFPT  GVG  KGEQ+ SR+
Subjt:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.5e-5053.97Show/hide
Query:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS
        GP    S RK KA VREAR      ++Y  ++A     +EF+E EA ++  PHNDALV+TL +AN K+HRIL+DGGSS D+ SLT +KAM L  E+LK S
Subjt:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS

Query:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        LTPL+GFGGE +  +G IELP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++ I STY   +KFPTP GVG  KGEQ+ SR+
Subjt:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

A0A6J1DKR9 uncharacterized protein LOC1110214381.2e-4954.74Show/hide
Query:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP
        GGP    S RK KA VREAR   E  ++Y  ++A     +EF++    ++  PHNDAL++TL +AN K+HRIL+DGGSSAD +SLT +KAM L +E LK 
Subjt:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP

Query:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        SLTPL+GFGGE V   G IELPVTF  G  ++TKM++FLVVD  S+YNAIL R T++ +K I STY   +KFPTP GVG  KGEQ+  R+
Subjt:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

A0A6J1DQY2 uncharacterized protein LOC1110223212.4e-5355.84Show/hide
Query:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS
        GP    S RK KA VREAR   +  ++Y  ++      +EF+E EA ++  PHNDALV+TL +ANVK+HRIL+DGGSSAD++S T +KAM L  ++LK S
Subjt:  GPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPS

Query:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRDIQKCAQDD
          PLVGFGGE V LEG IELPVTFG G  +VTKM++FLVV+  S+YNAILGRPT+H +K I STY    KFPT  GVG  KGEQ+ SR+    +  D
Subjt:  LTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRDIQKCAQDD

A0A6J1DRG9 uncharacterized protein LOC1110235871.2e-4957.78Show/hide
Query:  KMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPSLTPLVGFGG
        K KA VREAR   E  ++Y  ++      +EF+E EA  +   HNDALV+TL +ANVK+HRIL+DGGSSAD++S T +KAM LE ++LK S  PLVGFGG
Subjt:  KMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPSLTPLVGFGG

Query:  ESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        E V  EG IELPVTFG G   VTKM++FLVV+  S+YN ILGR T+H +KVI STY   +KFPTP GV   KGEQ+ SR+
Subjt:  ESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

A0A6J1DXV4 uncharacterized protein LOC1110251472.5e-5056.32Show/hide
Query:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP
        GGP    S RK KA VREAR       +Y  ++A     +EF+E EA ++  PHNDALV+TL +ANVK+HRIL+DGGSSAD++S TT+K M L  ++LK 
Subjt:  GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKP

Query:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD
        S  PL+GFG E V  EG IEL VTFG G  +VTKM++FLVVD  S+YNAILGR T+H +K I STY   +KFPT  GVG  KGEQ+ SR+
Subjt:  SLTPLVGFGGESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATGATGACCCTGAATATTGGTGCCAAGGAGTCAAAGGACGGGTGAAAAAGGATCATGTTTGTTTTTGTCTTGGAAAAAAGAATGGTCTTACAATGATGTACAT
TTTGACCATGAGTCATAGGAGAAAGGTAATTTTGGACCACTCTGATGTACAAGGAGCTGACGAGGACAACTGGGCAGAAATAGGGCGGGAAGATGGACCCCAGAGGCGAA
ACAAGTCAATGGGTCGGGCCAAGACCGAAGGGGTCAGGCTTTCGGCCCGACCCCCTGCTCAGCCTCGGGCTTGGACCGAGGCTGAGCTCGGTCGCCTCCGTTTGGTCTCT
GTTGCCTCTGGCCGCCCTGGCTCCACCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGATATTTAAACCCCTCTTCGCCACTGAAGAA
GAGGACCCAAACTCTATTCTCTGACCCTCCTCTTGCTCTTACTTTCCTGCTTCCCATTGTTCTGCTTGATGACTTAAGCATCGGAGGCGTTGTGGATAGCACCACACCGG
TGTGCAGTTTATTGTCTTGCAGGCCACGCCTTCCCCCTTCACAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGAAGAAACCCCACGAGAGATCAGAACCATCTTT
GGAGGACCAGCTGGAGAAGGTTCAAGTAGGAAGATGAAAGCTATTGTCAGGGAAGCAAGGTTCGAACCAGAATATGGAGATATGTACTCTGTCCATCTAGCAAAGGCACA
CCCCCCTTTGGAGTTCACTGAGGCTGAGGCAGCGAACATTCATCAGCCACATAATGATGCCCTGGTGGTCACTCTAATGGTAGCTAATGTGAAAATCCATCGGATCCTAA
TTGATGGAGGAAGCTCGGCTGATGTCCTTTCTTTAACAACCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGA
GAGAGTGTGACCCTAGAAGGTAGTATAGAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTA
CAATGCAATCCTAGGAAGGCCAACATTGCATGAAATAAAGGTCATAGCTTCAACTTACCAATTGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTTTCAAAGGAG
AGCAGAAGGCATCAAGAGATATTCAGAAGTGTGCCCAAGACGACCGACTCAAGCATCACAATACGCGAGCCTGGACTACCAAGTCTACTTCGCCTCATCCAGACTTGAGA
TTATGTGAGCCTGGACCATGGGTCTACCTCACCTCATTCTGGCTTGAGCATCTTCACACCATGCGAGCCTGGACTGTCGAGTCTACCTCGCCTCATCCAGATTTGAGATT
ACGTGAGCCTGGACCACCGAGTCTATCTCACCTCATCTGGCTTGAGCCCATTACTTCTTGCGAGGTTGGATCTCCTGGTCTACCTTGCCTCATCCAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCATGATGACCCTGAATATTGGTGCCAAGGAGTCAAAGGACGGGTGAAAAAGGATCATGTTTGTTTTTGTCTTGGAAAAAAGAATGGTCTTACAATGATGTACAT
TTTGACCATGAGTCATAGGAGAAAGGTAATTTTGGACCACTCTGATGTACAAGGAGCTGACGAGGACAACTGGGCAGAAATAGGGCGGGAAGATGGACCCCAGAGGCGAA
ACAAGTCAATGGGTCGGGCCAAGACCGAAGGGGTCAGGCTTTCGGCCCGACCCCCTGCTCAGCCTCGGGCTTGGACCGAGGCTGAGCTCGGTCGCCTCCGTTTGGTCTCT
GTTGCCTCTGGCCGCCCTGGCTCCACCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGATATTTAAACCCCTCTTCGCCACTGAAGAA
GAGGACCCAAACTCTATTCTCTGACCCTCCTCTTGCTCTTACTTTCCTGCTTCCCATTGTTCTGCTTGATGACTTAAGCATCGGAGGCGTTGTGGATAGCACCACACCGG
TGTGCAGTTTATTGTCTTGCAGGCCACGCCTTCCCCCTTCACAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGAAGAAACCCCACGAGAGATCAGAACCATCTTT
GGAGGACCAGCTGGAGAAGGTTCAAGTAGGAAGATGAAAGCTATTGTCAGGGAAGCAAGGTTCGAACCAGAATATGGAGATATGTACTCTGTCCATCTAGCAAAGGCACA
CCCCCCTTTGGAGTTCACTGAGGCTGAGGCAGCGAACATTCATCAGCCACATAATGATGCCCTGGTGGTCACTCTAATGGTAGCTAATGTGAAAATCCATCGGATCCTAA
TTGATGGAGGAAGCTCGGCTGATGTCCTTTCTTTAACAACCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGA
GAGAGTGTGACCCTAGAAGGTAGTATAGAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTA
CAATGCAATCCTAGGAAGGCCAACATTGCATGAAATAAAGGTCATAGCTTCAACTTACCAATTGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTTTCAAAGGAG
AGCAGAAGGCATCAAGAGATATTCAGAAGTGTGCCCAAGACGACCGACTCAAGCATCACAATACGCGAGCCTGGACTACCAAGTCTACTTCGCCTCATCCAGACTTGAGA
TTATGTGAGCCTGGACCATGGGTCTACCTCACCTCATTCTGGCTTGAGCATCTTCACACCATGCGAGCCTGGACTGTCGAGTCTACCTCGCCTCATCCAGATTTGAGATT
ACGTGAGCCTGGACCACCGAGTCTATCTCACCTCATCTGGCTTGAGCCCATTACTTCTTGCGAGGTTGGATCTCCTGGTCTACCTTGCCTCATCCAGACTTGA
Protein sequenceShow/hide protein sequence
MDHDDPEYWCQGVKGRVKKDHVCFCLGKKNGLTMMYILTMSHRRKVILDHSDVQGADEDNWAEIGREDGPQRRNKSMGRAKTEGVRLSARPPAQPRAWTEAELGRLRLVS
VASGRPGSTWFVPKRLRIPKNPRSMSRYLNPSSPLKKRTQTLFSDPPLALTFLLPIVLLDDLSIGGVVDSTTPVCSLLSCRPRLPPSQTNLPLVAREGQEETPREIRTIF
GGPAGEGSSRKMKAIVREARFEPEYGDMYSVHLAKAHPPLEFTEAEAANIHQPHNDALVVTLMVANVKIHRILIDGGSSADVLSLTTFKAMQLERELLKPSLTPLVGFGG
ESVTLEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEIKVIASTYQLLLKFPTPNGVGVFKGEQKASRDIQKCAQDDRLKHHNTRAWTTKSTSPHPDLR
LCEPGPWVYLTSFWLEHLHTMRAWTVESTSPHPDLRLREPGPPSLSHLIWLEPITSCEVGSPGLPCLIQT