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Lag0026196 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026196
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr10:31949502..31949825
RNA-Seq ExpressionLag0026196
SyntenyLag0026196
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-1854.21Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  GS  GTKS+P +  SKK  KKKGG+GN  + +   K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]7.0e-1853.27Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  GS  GTKS+P +  +KK  KKKGG+GN  + +   K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.0e-1853.27Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  GS  GTKS+P +  +KK  KKKGG+GN  + +   K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

KAA0050670.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-1854.21Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  G  FGTKS+P +  +KK  KKKGG+GN  + +V  K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

XP_038874988.1 uncharacterized protein LOC120067510 [Benincasa hispida]4.4e-2056.07Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR NA M K Q+NLT          SL K+KG +E  A++AHSKRKF+ G   GTK+V Q+ +SKKI K KG KG A +A  +GKGK K + DKGKCF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCNVDGH
Subjt:  HCNVDGH

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.4e-1853.27Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  GS  GTKS+P +  +KK  KKKGG+GN  + +   K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

A0A5A7SMN4 Gag/pol protein1.5e-1854.21Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  GS  GTKS+P +  SKK  KKKGG+GN  + +   K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

A0A5A7U676 Gag/pol protein6.8e-1954.21Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  G  FGTKS+P +  +KK  KKKGG+GN  + +V  K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

A0A5A7V4M1 Gag/pol protein3.4e-1853.27Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  GS  GTKS+P +  +KK  KKKGG+GN  + +   K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

A0A5D3CPJ6 Gag/pol protein3.4e-1853.27Show/hide
Query:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF
        +QFR+NA MNK  Y LT LLN+LQ ++SL K KG  +G AN+A S RKF  GS  GTKS+P +  +KK  KKKGG+GN  + +   K   K  A KG CF
Subjt:  MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCF

Query:  HCNVDGH
        HCN +GH
Subjt:  HCNVDGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTTCGTACGAACGCTTTCATGAATAAGTTTCAATATAACCTGACCATCCTTCTTAACAAGCTACAGATTTACCAGTCTTTGTTTAAGAGTAAGGGAACTGTAGA
AGGAGCGGCCAACATGGCCCATTCCAAGAGAAAGTTCCAGATGGGTTCATGTTTTGGAACTAAATCTGTACCTCAAGCATATTCTTCAAAGAAAATTTTGAAGAAGAAGG
GTGGTAAGGGGAATGCTCTCTCCGCTATTGTTCAAGGCAAGGGAAAGGCCAAGGTTGTGGCCGATAAGGGCAAGTGCTTCCACTGTAATGTGGATGGGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATTTCGTACGAACGCTTTCATGAATAAGTTTCAATATAACCTGACCATCCTTCTTAACAAGCTACAGATTTACCAGTCTTTGTTTAAGAGTAAGGGAACTGTAGA
AGGAGCGGCCAACATGGCCCATTCCAAGAGAAAGTTCCAGATGGGTTCATGTTTTGGAACTAAATCTGTACCTCAAGCATATTCTTCAAAGAAAATTTTGAAGAAGAAGG
GTGGTAAGGGGAATGCTCTCTCCGCTATTGTTCAAGGCAAGGGAAAGGCCAAGGTTGTGGCCGATAAGGGCAAGTGCTTCCACTGTAATGTGGATGGGCACTAG
Protein sequenceShow/hide protein sequence
MQFRTNAFMNKFQYNLTILLNKLQIYQSLFKSKGTVEGAANMAHSKRKFQMGSCFGTKSVPQAYSSKKILKKKGGKGNALSAIVQGKGKAKVVADKGKCFHCNVDGH