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Lag0026198 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026198
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr10:32059781..32060149
RNA-Seq ExpressionLag0026198
SyntenyLag0026198
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024018055.1 uncharacterized protein LOC112090603 [Morus notabilis]2.1e-1043.18Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKP--SKTQDVE-KNSDKKVVVEKELESGKN-DGDSNNNA-------GASASVPD
        +GQ+AN LK RPQG LP+NTE PRR G E  +A+ LR GK LE R KP  + T+    +  +KK + +KE    K  D D  N A        A+ S   
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKP--SKTQDVE-KNSDKKVVVEKELESGKN-DGDSNNNA-------GASASVPD

Query:  VERPYVPSLPYVLPLPFPQRQKPTNQDGQFKK
          RP         PLPFPQR +   QDGQF+K
Subjt:  VERPYVPSLPYVLPLPFPQRQKPTNQDGQFKK

XP_030494874.1 uncharacterized protein LOC115710657 [Cannabis sativa]1.5e-0841.46Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKEL--ESGKNDGDSNNNAGASASVPDVERPYVPSL
        +G LANELKARPQG LP++TE+PRR G EQ  A+ LRSGK L    K S+ +         + ++K+L  ++ +   D++     +     +E   V S 
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKEL--ESGKNDGDSNNNAGASASVPDVERPYVPSL

Query:  PYVLPLPFPQRQKPTNQDGQFKK
        P   PLPFPQR +   QDGQF+K
Subjt:  PYVLPLPFPQRQKPTNQDGQFKK

XP_030504828.1 uncharacterized protein LOC115719782 [Cannabis sativa]9.8e-0839.67Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLPY
        +G LANELKARPQG LP++TE+PRR G EQ +++ LRSGK L+     +  ++++ + +   +   E  S K  G S     +S       +P       
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLPY

Query:  VLPLPFPQRQKPTNQDGQFKK
          PLPFPQR +   QDGQFK+
Subjt:  VLPLPFPQRQKPTNQDGQFKK

XP_030505184.1 uncharacterized protein LOC115720166 [Cannabis sativa]2.3e-0941.41Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERR-------KPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERP
        +G LANELKARPQG LP++TE+PRR G EQ +++ LRSGK L+          +P+  Q  EK S K      +           +N+  SA V    +P
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERR-------KPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERP

Query:  YVPSLPYVLPLPFPQRQKPTNQDGQFKK
                 PLPFPQR +   QDGQFKK
Subjt:  YVPSLPYVLPLPFPQRQKPTNQDGQFKK

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]3.6e-1041.41Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERR-------KPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERP
        +G LANELKARPQG LP++TE+PRR G EQ +++ LRSGK L+          +P+  Q+ EK S K    ++  ++   D  S   + +  S P   +P
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERR-------KPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERP

Query:  YVPSLPYVLPLPFPQRQKPTNQDGQFKK
                 PLPFPQR +   QDGQFKK
Subjt:  YVPSLPYVLPLPFPQRQKPTNQDGQFKK

TrEMBL top hitse value%identityAlignment
A0A3S3N117 Retrotrans_gag domain-containing protein7.6e-0639.84Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEE--RRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSL
        MGQLAN +  R QG LP+ TE+  R   EQV+A+ LRSGK L    R KP K Q      D+KV V  +    K + + ++      + PD   PYVP  
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEE--RRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSL

Query:  PYVLPLPFPQRQKPTNQDGQFKK
            P+P+PQR +    D QF K
Subjt:  PYVLPLPFPQRQKPTNQDGQFKK

A0A6J1DPM2 uncharacterized protein LOC1110223661.8e-0739.67Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLPY
        +GQLAN+LKARPQG +P +TE P+R G EQ +AV LRSG   E    P    +V+K S     ++      K +  ++    AS S P  +  + P    
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLPY

Query:  VLPLPFPQRQKPTNQDGQFKK
         +P PFPQR    NQ+ QF+K
Subjt:  VLPLPFPQRQKPTNQDGQFKK

A0A6J1DTH7 uncharacterized protein LOC1110229714.4e-0638.84Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLPY
        +GQL+N+LKARPQG  P +TE P+R G EQ +AV LRSG   E   +P    +VEK S        E E  K        +GAS+           +  +
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLPY

Query:  VLPLPFPQRQKPTNQDGQFKK
        +L  PFPQ     NQ+ QF+K
Subjt:  VLPLPFPQRQKPTNQDGQFKK

A0A6J1DY39 uncharacterized protein LOC1110256534.4e-0634.96Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSK-TQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLP
        +GQL NE++ RPQG LP++TE PRR+G E   ++  RSG   E  R P + +    +  D + V +K +E                  P V  P  P + 
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSK-TQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLP

Query:  YVL-PLPFPQRQKPTNQDGQFKK
            P PFPQR    NQD  F+K
Subjt:  YVL-PLPFPQRQKPTNQDGQFKK

A0A6J1H7K8 uncharacterized protein LOC1114611674.0e-0735.97Show/hide
Query:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSK---------TQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVE
        +GQLANEL+ RP GKLP++TE P+R G EQ QA+ LRSGK +  R +  K         T D ++  ++ VV E   E  KND ++      S +  ++ 
Subjt:  MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSK---------TQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVE

Query:  RP---------YVPSLPYVLPLPFPQRQKPTNQDGQFKK
        +P            S  Y    PFPQR K   ++  F+K
Subjt:  RP---------YVPSLPYVLPLPFPQRQKPTNQDGQFKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCAGCTAGCGAATGAGTTGAAGGCACGACCTCAAGGAAAACTTCCTGCGAATACTGAGCACCCTAGAAGGGTAGGTAACGAGCAGGTACAGGCAGTGCCTCTAAG
GAGTGGTAAGCCACTAGAAGAGAGAAGAAAGCCTAGTAAAACCCAGGATGTAGAGAAAAATAGTGATAAAAAGGTTGTTGTTGAAAAAGAGTTGGAGTCTGGTAAAAATG
ATGGAGACAGCAATAATAATGCTGGAGCATCTGCCTCTGTTCCAGATGTAGAACGACCTTATGTACCGTCCCTACCTTATGTACTACCTCTACCTTTTCCACAAAGACAG
AAGCCTACGAATCAGGATGGTCAATTTAAAAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCAGCTAGCGAATGAGTTGAAGGCACGACCTCAAGGAAAACTTCCTGCGAATACTGAGCACCCTAGAAGGGTAGGTAACGAGCAGGTACAGGCAGTGCCTCTAAG
GAGTGGTAAGCCACTAGAAGAGAGAAGAAAGCCTAGTAAAACCCAGGATGTAGAGAAAAATAGTGATAAAAAGGTTGTTGTTGAAAAAGAGTTGGAGTCTGGTAAAAATG
ATGGAGACAGCAATAATAATGCTGGAGCATCTGCCTCTGTTCCAGATGTAGAACGACCTTATGTACCGTCCCTACCTTATGTACTACCTCTACCTTTTCCACAAAGACAG
AAGCCTACGAATCAGGATGGTCAATTTAAAAAAAAATAG
Protein sequenceShow/hide protein sequence
MGQLANELKARPQGKLPANTEHPRRVGNEQVQAVPLRSGKPLEERRKPSKTQDVEKNSDKKVVVEKELESGKNDGDSNNNAGASASVPDVERPYVPSLPYVLPLPFPQRQ
KPTNQDGQFKKK