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Lag0026202 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026202
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:32179315..32181289
RNA-Seq ExpressionLag0026202
SyntenyLag0026202
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]3.0e-1062.75Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A N +  LTLG+R+I+GQ RW +V KVP +F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
KAA0042126.1 hypothetical protein E6C27_scaffold67G006100 [Cucumis melo var. makuwa]7.8e-1164.71Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A N    LTLG+R+I+GQ RW +V KVPR+F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]9.2e-1266.67Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IHH A N    LTLG+R+I+GQ RW +V KVPR+F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
TYK00336.1 hypothetical protein E5676_scaffold1923G00140 [Cucumis melo var. makuwa]1.7e-1062.75Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A+N +  LTLG+R+I+GQ RW  V KVP +F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
TYK18070.1 hypothetical protein E5676_scaffold306G004010 [Cucumis melo var. makuwa]7.8e-1164.71Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A N    LTLG+R+I+GQ RW +V KVPR+F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
TrEMBL top hitse value%identityAlignment
A0A5A7T019 PMD domain-containing protein1.4e-1062.75Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A N +  LTLG+R+I+GQ RW +V KVP +F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
A0A5A7TJH3 PMD domain-containing protein3.8e-1164.71Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A N    LTLG+R+I+GQ RW +V KVPR+F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
A0A5A7VHW8 PMD domain-containing protein4.5e-1266.67Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IHH A N    LTLG+R+I+GQ RW +V KVPR+F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
A0A5D3BQ12 PMD domain-containing protein8.4e-1162.75Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A+N +  LTLG+R+I+GQ RW  V KVP +F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
A0A5D3D2X6 PMD domain-containing protein3.8e-1164.71Show/hide
Query:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
        IH+ A N    LTLG+R+I+GQ RW +V KVPR+F FT  YWEWLELVVGR
Subjt:  IHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGTCGCTGCTTGCAGAAACACGGCGGCGTCTTCGCGGCGACAACGGCGAAGGGGGGAGGAGAGTTAGAGAGAGAGACAAGAGAGACGGAACAATCGAGTCCAAT
TGCTCTCATTGCACAACTGATATTTGTTTGCCAACTAGTGTTGAATTCCTTCACAGTAGCTTTCATCCACCATCCAGCTTACAACCAAAATCCAGAGTTGACTCTAGGAC
GTCGAATGATAGATGGGCAAGCCCGCTGGAATTCTGTGATGAAGGTTCCTAGAGACTTCTCATTCACTTCACTCTATTGGGAATGGTTGGAGTTGGTAGTTGGTCGTAGG
GGTGTGCATCGGTCGGTCGGGATCGGTTTTTGGCCAAAACCGACGCTGAAAATCGACCATTCGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGTCGCTGCTTGCAGAAACACGGCGGCGTCTTCGCGGCGACAACGGCGAAGGGGGGAGGAGAGTTAGAGAGAGAGACAAGAGAGACGGAACAATCGAGTCCAAT
TGCTCTCATTGCACAACTGATATTTGTTTGCCAACTAGTGTTGAATTCCTTCACAGTAGCTTTCATCCACCATCCAGCTTACAACCAAAATCCAGAGTTGACTCTAGGAC
GTCGAATGATAGATGGGCAAGCCCGCTGGAATTCTGTGATGAAGGTTCCTAGAGACTTCTCATTCACTTCACTCTATTGGGAATGGTTGGAGTTGGTAGTTGGTCGTAGG
GGTGTGCATCGGTCGGTCGGGATCGGTTTTTGGCCAAAACCGACGCTGAAAATCGACCATTCGGTTTGA
Protein sequenceShow/hide protein sequence
MSGRCLQKHGGVFAATTAKGGGELERETRETEQSSPIALIAQLIFVCQLVLNSFTVAFIHHPAYNQNPELTLGRRMIDGQARWNSVMKVPRDFSFTSLYWEWLELVVGRR
GVHRSVGIGFWPKPTLKIDHSV