| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-103 | 90.43 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWT VK +LKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-101 | 89.47 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWT VK ILKYLRRTRDYMLV+GAKDL+LTGYT+S+FQ+DKDSRKSTS S+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWL+KFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-104 | 91.39 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
YVMLCTRPDICYAVGIVSRYQSN GLDHWT VK ILKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-103 | 90.43 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWT VK +LKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa] | 4.0e-103 | 90.91 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWTTVK ILKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLN GAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 4.8e-102 | 89.47 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWT VK ILKYLRRTRDYMLV+GAKDL+LTGYT+S+FQ+DKDSRKSTS S+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWL+KFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| A0A5A7TKM4 Gag/pol protein | 2.3e-104 | 91.39 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
YVMLCTRPDICYAVGIVSRYQSN GLDHWT VK ILKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| A0A5A7TZD0 Gag/pol protein | 8.8e-104 | 90.43 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWT VK +LKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| A0A5A7UYE8 Gag/pol protein | 8.8e-104 | 90.43 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWT VK +LKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLNGGAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| A0A5A7V1F5 Gag/pol protein | 2.0e-103 | 90.91 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y MLCTRPDICYAVGIVSRYQSN GLDHWTTVK ILKYLRRTRDYMLV+GAKDL+LTGYTDS+FQ+DKDSRKSTSGS+FTLN GAVVWRSIKQGCIADST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
MEAEYVAACEAAKEAVWLRKFL +LEVV NMNLPITLYCDNSG VANSKEPRSHK+GKHIERKYHLIREIVQRGDV+V KIASEHNI DPFTK L AKVF
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
EGHLESLGL
Subjt: EGHLESLGL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-35 | 39.53 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFG---AKDLVLTGYTDSNFQSDKDSRKSTSGSMFTL-NGGAVVWRSIKQGCI
Y+MLCTRPD+ AV I+SRY S + W +K +L+YL+ T D L+F A + + GY DS++ + RKST+G +F + + + W + +Q +
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFG---AKDLVLTGYTDSNFQSDKDSRKSTSGSMFTL-NGGAVVWRSIKQGCI
Query: ADSTMEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALL
A S+ EAEY+A EA +EA+WL+ LT++ + L PI +Y DN G ++ + P HK+ KHI+ KYH RE VQ + + I +E+ + D FTK L
Subjt: ADSTMEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALL
Query: AKVFEGHLESLGLEQ
A F + LGL Q
Subjt: AKVFEGHLESLGLEQ
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| P0CV72 Secreted RxLR effector protein 161 | 4.3e-23 | 47.9 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVF-GAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADS
Y+M+ TRPD+ AVG++S++ S+ HW +K +L+YL+ T+ Y L F A L GY+D+++ D +SR+STSG +F LNGG V WRS KQ +A S
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVF-GAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADS
Query: TMEAEYVAACEAAKEAVWL
+ E EY+A EA +EAVWL
Subjt: TMEAEYVAACEAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-44 | 44.5 | Show/hide |
Query: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Y M+CTRPDI +AVG+VSR+ N G +HW VK IL+YLR T L FG D +L GYTD++ D D+RKS++G +FT +GGA+ W+S Q C+A ST
Subjt: YVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDYMLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADST
Query: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
EAEY+AA E KE +WL++FL L + +YCD+ + SK H + KHI+ +YH IRE+V + V+KI++ N D TK + F
Subjt: MEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVF
Query: EGHLESLGL
E E +G+
Subjt: EGHLESLGL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-23 | 31.03 | Show/hide |
Query: LSVLTPSPLSPPTT-RFCRSPTYVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDY-MLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGS
LS+ + + L+ PT R + TRPDI YAV +S++ +H +K IL+YL T ++ + + L L Y+D+++ DKD ST+G
Subjt: LSVLTPSPLSPPTT-RFCRSPTYVMLCTRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDY-MLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGS
Query: MFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVV
+ L + W S KQ + S+ EAEY + + E W+ LT E+ + + P +YCDN G P H + KHI YH IR VQ G +
Subjt: MFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVV
Query: VIKIASEHNIVDPFTKALLAKVFEGHLESLGL
V+ +++ + D TK L F+ +G+
Subjt: VIKIASEHNIVDPFTKALLAKVFEGHLESLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.6e-25 | 33.17 | Show/hide |
Query: TRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDY-MLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADSTMEAE
TRPD+ YAV +S+Y DHW +K +L+YL T D+ + + L L Y+D+++ D D ST+G + L + W S KQ + S+ EAE
Subjt: TRPDICYAVGIVSRYQSNLGLDHWTTVKGILKYLRRTRDY-MLVFGAKDLVLTGYTDSNFQSDKDSRKSTSGSMFTLNGGAVVWRSIKQGCIADSTMEAE
Query: YVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVFEGHL
Y + + E W+ LT L + L+ P +YCDN G P H + KHI YH IR VQ G + V+ +++ + D TK L F+
Subjt: YVAACEAAKEAVWLRKFLTNLEVVLNMNLPITLYCDNSGVVANSKEPRSHKQGKHIERKYHLIREIVQRGDVVVIKIASEHNIVDPFTKALLAKVFEGHL
Query: ESLGL
+G+
Subjt: ESLGL
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