; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026213 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026213
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:32496297..32497189
RNA-Seq ExpressionLag0026213
SyntenyLag0026213
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019195637.1 PREDICTED: uncharacterized protein LOC109189300 [Ipomoea nil]6.1e-4642.55Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG-------LLRGSELRGQITGFRIGRAS
        MK ++  ++S  QSAFIP R + DN ++  E  H L R+  G   W ALKLDM+KAYDR+EWSFL+  ++ LG       LL+ ++ +G+I G R+ R +
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG-------LLRGSELRGQITGFRIGRAS

Query:  PSISHLFFEDDSLLFFRANGNEASVIRDLLV-------------------SPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIG
        P ISHLFF DDSLLFF+A   EA VI+  L                    S NT ++ +  ++H+L V+++P + +YLGLPSF+ RN+  A  +I+D+I 
Subjt:  PSISHLFFEDDSLLFFRANGNEASVIRDLLV-------------------SPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIG

Query:  RQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF
        +++  W  K  S AGKEVLLKS+ QA+P + M+ F
Subjt:  RQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF

XP_021732105.1 uncharacterized protein LOC110698909 [Chenopodium quinoa]9.7e-4441.2Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG-----LLRGSELRGQITGFRIGRASPS
        +K +L ++IS+NQSAF+PGR + DNA++  EC H +++R KGR   +A+KLDMSKAYDRVEW FL+  +L++G     +       G I G +  R  P 
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG-----LLRGSELRGQITGFRIGRASPS

Query:  ISHLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQ
        ISHL F DDSLLF RAN  E S I D+L                    S     E ++ +  +L + +   H QYLG+P+   R++ G  + + +R+ ++
Subjt:  ISHLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQ

Query:  IQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF
        +QGWK K  S AGKE+LLKS++QAIP Y M  +
Subjt:  IQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF

XP_030487228.1 uncharacterized protein LOC115704152 [Cannabis sativa]4.4e-4439.39Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG---LLRGSELRGQITGFRIGRASPSIS
        +K +LP++IS+ QSAF+PGR + DN ++ FE +H L+R+   +  ++A+K+DMSKAYDRVEW FLQA + +LG   L++  E  G++ GF++ R +P IS
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG---LLRGSELRGQITGFRIGRASPSIS

Query:  HLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQ
        H+ F DD+ +F +AN   A  + +LL                      NT  E +  +   + +S +  +  YLGLP+ + RN++  L F+K+R+ ++IQ
Subjt:  HLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQ

Query:  GWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF
        GW+G+F S AGKE+L+K++ Q++P Y MN F
Subjt:  GWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF

XP_030924745.1 uncharacterized protein LOC115951731 [Quercus lobata]3.7e-4340.39Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRL---------------------------G
        +K IL H+I  +QSAF+ GR + DN ++ FE +H L+R+T+GR  ++ALKLDMSKAYD+VEW FL   M  L                           G
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRL---------------------------G

Query:  LLRGSELRGQITGFRIGRASPSISHLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGL
        L++ +E  G I G  I R  P +SHLFF DDS+LF RA   E   I DLL                    S NT  + Q  I ++L V     +++YLGL
Subjt:  LLRGSELRGQITGFRIGRASPSISHLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGL

Query:  PSFMPRNQSGALKFIKDRIGRQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF
        P+ + R +  +  +IK+R+ R++QGWK K  S AG+EVL+KS++QAIP YTM+ F
Subjt:  PSFMPRNQSGALKFIKDRIGRQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF

XP_031127809.1 uncharacterized protein LOC116029902 [Ipomoea triloba]4.8e-4336.97Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG---------------------------
        MKH+L ++IS++QSAFIP R + DN ++  E  H L R+  G   W AL LDM+KAYDR+EWSFL   +  LG                           
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG---------------------------

Query:  -----------------------------LLRGSELRGQITGFRIGRASPSISHLFFEDDSLLFFRANGNEASVIRDLL-------------------VS
                                     LL+ ++L G I G+R+ R +P ISHLFF DDSLLFFRAN  EA+VI+  L                    S
Subjt:  -----------------------------LLRGSELRGQITGFRIGRASPSISHLFFEDDSLLFFRANGNEASVIRDLL-------------------VS

Query:  PNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF
         NT E+ ++ ++ VL V ++P   +YLGLP+F+ RN+  AL +I+D+I +++  W  K  S AGKEVLLK++ QA+P ++M+ F
Subjt:  PNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF

TrEMBL top hitse value%identityAlignment
A0A2N9EUG0 Uncharacterized protein7.3e-4542.79Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG-LLRGSELRGQITGFRIGRASPSISHL
        +K ILPH+IS+ QSAF+PGR + DN ++ FE +H ++    GR   +ALKLDM KAYDRVEW+FL + M  L  LL+ ++L G I+G  + R  P I+HL
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG-LLRGSELRGQITGFRIGRASPSISHL

Query:  FFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGW
        FF DDSLLF RA   E   I+D+L                    S NT + AQ+ I   L+V     +++YLGLPSF+ R +      IK+R+  +++GW
Subjt:  FFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGW

Query:  KGKFFSTAGKEVLLKSIVQAIPCYTMNYF
        K K  S +G+E+L+K+++QAI  Y+M+ F
Subjt:  KGKFFSTAGKEVLLKSIVQAIPCYTMNYF

A0A803NTG1 Uncharacterized protein2.1e-4439.39Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG---LLRGSELRGQITGFRIGRASPSIS
        +K +LP++IS+ QSAF+PGR + DN ++ FE +H L+R+   +  ++A+K+DMSKAYDRVEW FLQA + +LG   L++  E  G++ GF++ R +P IS
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG---LLRGSELRGQITGFRIGRASPSIS

Query:  HLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQ
        H+ F DD+ +F +AN   A  + +LL                      NT  E +  +   + +S +  +  YLGLP+ + RN++  L F+K+R+ ++IQ
Subjt:  HLFFEDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQ

Query:  GWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF
        GW+G+F S AGKE+L+K++ Q++P Y MN F
Subjt:  GWKGKFFSTAGKEVLLKSIVQAIPCYTMNYF

A0A803P8Z3 Uncharacterized protein4.7e-4442.29Show/hide
Query:  KHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLGLLRGSELRGQITGFRIGRASPSISHLFF
        K ILP +IS+ QSAF+P R + DN ++ FE +H ++ +T GR      KLDMSKA+DRVEW FL+A M ++GLL   +  G + GF++ R +P ISHLFF
Subjt:  KHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLGLLRGSELRGQITGFRIGRASPSISHLFF

Query:  EDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWKG
         DDSLLF +A+ +    I+ +L                    SPNT   AQ +    LS+    CH++YLGLPS+  R++      IK++I + +  W  
Subjt:  EDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWKG

Query:  KFFSTAGKEVLLKSIVQAIPCYTMNYF
        K FS  G+EVLLK++VQ+IP Y M+ F
Subjt:  KFFSTAGKEVLLKSIVQAIPCYTMNYF

A0A803PEL8 Uncharacterized protein5.9e-4743.17Show/hide
Query:  KHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLGLLRGSELRGQITGFRIGRASPSISHLFF
        KH+LP++IS++QSAF+P R + DN ++ FE ++ ++ +T GR    +LKLDMSKA+DRVEWSF++  M ++GLL+  E  G + GF++ R +PSISHLFF
Subjt:  KHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLGLLRGSELRGQITGFRIGRASPSISHLFF

Query:  EDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWKG
         DDSLLF +AN +    I+  L                    SPNT   AQ +    L++    CH++YLGLPS+  R++      IK++I R +  W  
Subjt:  EDDSLLFFRANGNEASVIRDLL-------------------VSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWKG

Query:  KFFSTAGKEVLLKSIVQAIPCYTMNYF
        K FS  G+EVLLK++VQ+IP Y M+ F
Subjt:  KFFSTAGKEVLLKSIVQAIPCYTMNYF

A0A803QKN2 Uncharacterized protein1.0e-4340.35Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLGLLRGSELRGQITGFRIGRASPSISHLF
        +K ++ +++S  QSAFIPGR + DN ++ FE +H L+R+ +G+  ++ALKLDMSKAYDR+EW +L+A      L+R  ELRG + G ++   +P +SH+ 
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLGLLRGSELRGQITGFRIGRASPSISHLF

Query:  FEDDSLLFFRANGNEASVIRDLLV-------------------SPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWK
        F DDS L+ +A   EAS +R+LL                    S NT    Q  I   L +  +  + +YLGLPS M RN++  L ++K+R+ +++Q W 
Subjt:  FEDDSLLFFRANGNEASVIRDLLV-------------------SPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWK

Query:  GKFFSTAGKEVLLKSIVQAIPCYTMNYF
         KF S AGKEVL+K++ QA+P Y M+ F
Subjt:  GKFFSTAGKEVLLKSIVQAIPCYTMNYF

SwissProt top hitse value%identityAlignment
P14381 Transposon TX1 uncharacterized 149 kDa protein4.6e-0436.23Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATM
        +K +L  +I  +QS  +PGR + DN  L  + +H  RR     A    L LD  KA+DRV+  +L  T+
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATM

Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases5.5e-1342.47Show/hide
Query:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG
        +K ++ +LI   Q++FIPGR   DN +   E +H +RR+ KG   W+ LKLD+ KAYDR+ W +L+ T++  G
Subjt:  MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCACATACTGCCACACCTGATTTCGCAGAATCAGAGTGCGTTTATTCCGGGGAGGTGTGTGGTGGACAATGCCATTCTAGGGTTTGAGTGTATACACGAGCTGCG
GAGGAGGACGAAGGGTAGGGCTAAATGGGTTGCGTTGAAGCTTGACATGAGCAAAGCATATGATAGGGTGGAGTGGTCTTTCCTCCAAGCGACCATGTTGAGGCTGGGCC
TGCTGCGTGGCTCTGAGCTGAGAGGGCAAATTACAGGTTTTCGGATTGGACGTGCTAGTCCATCGATCTCACATCTCTTTTTTGAGGATGATAGTTTACTTTTTTTCAGG
GCTAACGGGAATGAAGCTTCGGTCATTCGAGATCTGTTGGTTAGCCCGAACACGGGGGAGGAGGCTCAGCAGTATATCAGCCATGTCCTCTCTGTGTCCCGCTCTCCATG
TCATCAACAGTATCTAGGCTTACCGTCGTTTATGCCTCGCAATCAGTCGGGAGCGTTGAAGTTTATAAAGGATCGTATCGGGCGGCAGATTCAGGGATGGAAGGGAAAAT
TCTTCTCGACAGCTGGGAAGGAAGTTCTCCTTAAGTCTATAGTGCAAGCTATTCCTTGCTATACAATGAACTATTTCGGTTGCCTAGATGTCTGGTCAGGGAGATCCACA
GGACTATGGCTAAATTTTTGTGGAATGGGTCTGAGGATTCGAGGCGTATACACTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCACATACTGCCACACCTGATTTCGCAGAATCAGAGTGCGTTTATTCCGGGGAGGTGTGTGGTGGACAATGCCATTCTAGGGTTTGAGTGTATACACGAGCTGCG
GAGGAGGACGAAGGGTAGGGCTAAATGGGTTGCGTTGAAGCTTGACATGAGCAAAGCATATGATAGGGTGGAGTGGTCTTTCCTCCAAGCGACCATGTTGAGGCTGGGCC
TGCTGCGTGGCTCTGAGCTGAGAGGGCAAATTACAGGTTTTCGGATTGGACGTGCTAGTCCATCGATCTCACATCTCTTTTTTGAGGATGATAGTTTACTTTTTTTCAGG
GCTAACGGGAATGAAGCTTCGGTCATTCGAGATCTGTTGGTTAGCCCGAACACGGGGGAGGAGGCTCAGCAGTATATCAGCCATGTCCTCTCTGTGTCCCGCTCTCCATG
TCATCAACAGTATCTAGGCTTACCGTCGTTTATGCCTCGCAATCAGTCGGGAGCGTTGAAGTTTATAAAGGATCGTATCGGGCGGCAGATTCAGGGATGGAAGGGAAAAT
TCTTCTCGACAGCTGGGAAGGAAGTTCTCCTTAAGTCTATAGTGCAAGCTATTCCTTGCTATACAATGAACTATTTCGGTTGCCTAGATGTCTGGTCAGGGAGATCCACA
GGACTATGGCTAAATTTTTGTGGAATGGGTCTGAGGATTCGAGGCGTATACACTGGATGA
Protein sequenceShow/hide protein sequence
MKHILPHLISQNQSAFIPGRCVVDNAILGFECIHELRRRTKGRAKWVALKLDMSKAYDRVEWSFLQATMLRLGLLRGSELRGQITGFRIGRASPSISHLFFEDDSLLFFR
ANGNEASVIRDLLVSPNTGEEAQQYISHVLSVSRSPCHQQYLGLPSFMPRNQSGALKFIKDRIGRQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNYFGCLDVWSGRST
GLWLNFCGMGLRIRGVYTG