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Lag0026233 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026233
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:32875090..32877112
RNA-Seq ExpressionLag0026233
SyntenyLag0026233
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1818829.1 unnamed protein product [Ananas comosus var. bracteatus]1.5e-3248.15Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV
        VAYVLTEKNPKK++ + MN +E +EH+EK +KYEKDEY                                            KY            GKSV
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV

Query:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALIQEDSGNKNLYLRPML
        VEQ QDFQMI  EV SE +K G+NLIV+GIIDKLPPSWREFQK + HKQKE+ LETLI RIRVEEE RGQDAL  +++        PM+
Subjt:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALIQEDSGNKNLYLRPML

CAD1824743.1 unnamed protein product [Ananas comosus var. bracteatus]1.9e-3251.45Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV
        VAYVLTEKNPKK++ + MN +E +EH+EK +KYEKDEY                                            KY            GKSV
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV

Query:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL
        VEQ QDFQMI  EV SE +K GDNLIV+GIIDKLPPSW+EFQK + HKQKE+ LETLI RIRVEEE RGQDAL
Subjt:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL

CAD1825963.1 unnamed protein product [Ananas comosus var. bracteatus]1.9e-3251.45Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV
        VAYVLTEKNPKK++ + MN  E +EH+EK +KYEKDEY                                            KY            GKSV
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV

Query:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL
        VEQ QDFQMI  EV SE +K GDNLIV+GIIDKLPPSWREFQ+ + HKQKE+ LETLI RIRVEEE RGQDAL
Subjt:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL

CAD1842415.1 unnamed protein product [Ananas comosus var. bracteatus]3.2e-3564.23Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------KY------------GKSVVEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPP
        VAYVLTEKNPKK++ + MN +E +EH+EK +KYEKDEY        KY            GKSVVEQ   FQMI  EV SE +K GDNLIV+GIIDKLPP
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------KY------------GKSVVEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPP

Query:  SWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL
        SWREFQK + HKQKE+ LETLI RIRVEEE RGQDAL
Subjt:  SWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL

CAD1844241.1 unnamed protein product [Ananas comosus var. bracteatus]1.0e-3347.78Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV
        VAYVLTEKNPKK++ + MN +E +EH+EK +KYEKDEY                                            KY            GKSV
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV

Query:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALIQED---SGNKNL----YLRPMLSKSH
        VEQ QDFQMI  EV SE +K GDNLIV+GIIDKLPPSWREFQK + HKQKE+ LETLI RIRVEEE RGQDAL  ++   S  K+L     L+P++ +  
Subjt:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALIQED---SGNKNL----YLRPMLSKSH

Query:  LWI
        L I
Subjt:  LWI

TrEMBL top hitse value%identityAlignment
A0A2N9G4T8 Uncharacterized protein1.1e-3350.28Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV
        V+YVLTEKNP K+    M+  E   H EK DKY+KDEY                                            KY            GKSV
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV

Query:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALI-QEDSGN
        VEQAQDFQMI+ EV SE IK+GDNL+V GI+DKLPPSWREFQK++CHKQKE  LETLITRIRVEEE RGQDAL+ QE +G+
Subjt:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALI-QEDSGN

A0A2N9HRP0 Uncharacterized protein4.9e-3457.05Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEYKY------------------------GKSVVEQAQDFQMIIPEVASERIKVGDNLIVVGIID
        V+YVLTEKNP K+  + M+ +E   H EK DK     Y+                         GKSVVEQAQDFQMI+ EV SE IK+GDNL+V GI+D
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEYKY------------------------GKSVVEQAQDFQMIIPEVASERIKVGDNLIVVGIID

Query:  KLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALI-QEDSGN
        KLPPSWREFQK++CHKQKE  LETLITRIRVEEE RGQDAL+ QE +G+
Subjt:  KLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALI-QEDSGN

A0A6V7QHW3 Uncharacterized protein1.5e-3564.23Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------KY------------GKSVVEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPP
        VAYVLTEKNPKK++ + MN +E +EH+EK +KYEKDEY        KY            GKSVVEQ   FQMI  EV SE +K GDNLIV+GIIDKLPP
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------KY------------GKSVVEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPP

Query:  SWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL
        SWREFQK + HKQKE+ LETLI RIRVEEE RGQDAL
Subjt:  SWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL

A0A6V7QMY0 Uncharacterized protein4.9e-3447.78Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV
        VAYVLTEKNPKK++ + MN +E +EH+EK +KYEKDEY                                            KY            GKSV
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV

Query:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALIQED---SGNKNL----YLRPMLSKSH
        VEQ QDFQMI  EV SE +K GDNLIV+GIIDKLPPSWREFQK + HKQKE+ LETLI RIRVEEE RGQDAL  ++   S  K+L     L+P++ +  
Subjt:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDALIQED---SGNKNL----YLRPMLSKSH

Query:  LWI
        L I
Subjt:  LWI

A0A6V7QUX3 Uncharacterized protein1.4e-3352.02Show/hide
Query:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV
        VAYVLTEKNPKK++ + MN +E +EH+EK +KYEKDEY                                            KY            GKSV
Subjt:  VAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEY--------------------------------------------KY------------GKSV

Query:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL
        VEQ QDFQMI  EV SER+K GDNLIV+GIIDKLPPSW+EFQK + HKQKE+ LETLI RIRVEEE RGQDAL
Subjt:  VEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEIYLETLITRIRVEEEGRGQDAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGGCGTATCAAGCTAATGGGTGTGATGATTCTAATGTGGCCTATGTCCTCACAGAAAAGAACCCGAAGAAGATTGATATTGAAAGCATGAACGTTGAAGAGTT
CATGGAACACCATGAGAAATTTGATAAGTATGAGAAAGATGAGTATAAATATGGAAAGTCTGTAGTGGAACAAGCACAAGATTTTCAGATGATAATACCTGAAGTAGCAT
CTGAAAGAATTAAGGTTGGAGACAATCTTATTGTTGTCGGCATAATCGACAAGCTTCCACCATCTTGGAGAGAATTTCAAAAGAATATGTGTCATAAGCAAAAAGAAATC
TATCTAGAAACGCTAATTACTCGCATTCGTGTGGAGGAAGAGGGAAGAGGGCAAGATGCATTGATTCAAGAAGATTCCGGAAACAAGAACCTGTATCTTAGGCCAATGTT
ATCGAAGAGTCATTTGTGGATAGATAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGGCGTATCAAGCTAATGGGTGTGATGATTCTAATGTGGCCTATGTCCTCACAGAAAAGAACCCGAAGAAGATTGATATTGAAAGCATGAACGTTGAAGAGTT
CATGGAACACCATGAGAAATTTGATAAGTATGAGAAAGATGAGTATAAATATGGAAAGTCTGTAGTGGAACAAGCACAAGATTTTCAGATGATAATACCTGAAGTAGCAT
CTGAAAGAATTAAGGTTGGAGACAATCTTATTGTTGTCGGCATAATCGACAAGCTTCCACCATCTTGGAGAGAATTTCAAAAGAATATGTGTCATAAGCAAAAAGAAATC
TATCTAGAAACGCTAATTACTCGCATTCGTGTGGAGGAAGAGGGAAGAGGGCAAGATGCATTGATTCAAGAAGATTCCGGAAACAAGAACCTGTATCTTAGGCCAATGTT
ATCGAAGAGTCATTTGTGGATAGATAACTGA
Protein sequenceShow/hide protein sequence
MMMAYQANGCDDSNVAYVLTEKNPKKIDIESMNVEEFMEHHEKFDKYEKDEYKYGKSVVEQAQDFQMIIPEVASERIKVGDNLIVVGIIDKLPPSWREFQKNMCHKQKEI
YLETLITRIRVEEEGRGQDALIQEDSGNKNLYLRPMLSKSHLWIDN