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Lag0026235 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026235
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:32898013..32898798
RNA-Seq ExpressionLag0026235
SyntenyLag0026235
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022931810.1 uncharacterized protein LOC111438099 [Cucurbita moschata]9.5e-7765.7Show/hide
Query:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI
        IV N ++ K E EF++ D +K S+NA A+NC++CAL  DEFNRV  C+SA EIW  LE THEGTNQVKE+KISMLVHNYELFKM+ NE I +MFT F NI
Subjt:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI

Query:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT
        +NALK LGK Y+TSENVRKILRSLPKSWEAKVT IQEAKDL+KLPL+ELVGSLMTHEI M  ++EE++KKKKS+ALKS  I+ DSE E  L++++ A  T
Subjt:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT

Query:  KKFKKHF-RKRNFPKKVNNQ-EGKGEKSNKDTIIYYECKKPG
        +K+K    RK+ F K   NQ E KGEKS  D +I YECKKPG
Subjt:  KKFKKHF-RKRNFPKKVNNQ-EGKGEKSNKDTIIYYECKKPG

XP_022971787.1 uncharacterized protein LOC111470465, partial [Cucurbita maxima]5.2e-6767.49Show/hide
Query:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI
        IV N ++ K E EF++ D +K S+NA A+NC++CAL  DEFNRV  C+SA EIW  LE THEGTNQVKE+KISMLVHNYELFKM+ NE I +MFT F NI
Subjt:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI

Query:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT
        +NALK LGK Y+TSENVRKILRSLPKSWEAKVT IQEAKDL+KLPL+ELVGSLMTHEI M  ++EE++KKKKS+ALKS  I+ DSE E  L++++ A  T
Subjt:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT

Query:  KKF
        +K+
Subjt:  KKF

XP_031739764.1 uncharacterized protein LOC116403291 [Cucumis sativus]2.1e-7166.03Show/hide
Query:  VGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIV
        V N D  K E+E+++ + +K S NAKA+NC++CAL  DEFNR+S C+SA+EIW+ LE THEGTNQVKESKISM VHNYELFKMDANETI++MFT F NI+
Subjt:  VGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIV

Query:  NALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLTK
        NALKGLGK YTTSENVRKILRSLPK+WEAKVT IQEAKDL+KLPLEEL+GSLMTHEIIMK ++E+++KKKKS+ALK+  ++ D E E  L++++ A  ++
Subjt:  NALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLTK

Query:  KFKKHFRKR
        K+K   +++
Subjt:  KFKKHFRKR

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]2.1e-8463.22Show/hide
Query:  VGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIV
        V N D  K E+E+++ + +K S NAKA+NC++CAL  DEFNR+S C+SA+EIW+ LE THEGTNQVKESKISM VHNYELFKMDANETI++MFT F NI+
Subjt:  VGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIV

Query:  NALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLTK
        NALKGLGK YTTSENVRKILRSLPK+WEAKVT IQEAKDL+KLPLEEL+GSLMTHEIIMK ++E+++KKKKS+ALK+  ++ D E E  L++++ A  ++
Subjt:  NALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLTK

Query:  KFKKHF-RKRNFPKKVNNQ-EGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKKTI
        K+K    RK+ F K ++ Q E KGEKS KD +I YECK+ GH++ DCP  K   K  KK +
Subjt:  KFKKHF-RKRNFPKKVNNQ-EGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKKTI

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]1.3e-12186.92Show/hide
Query:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI
        IV NKDI KEEK+ NDEDK+KFSINAKAMNC+FC LCP+EFN++SACNSAKEIWDML+ THEGTNQVKESKISMLVHNY+LFKMDANETISEMFT F NI
Subjt:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI

Query:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT
        VN LKGLGKSYTTSENVRKILRSLPKSWEAKVT IQEAKDLSKLPLEELVGSLM HEIIMKANVEED KKKK+L LKSTQ+QEDSETEAELNDEEFA L 
Subjt:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT

Query:  KKFKKHFRKRNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKKTI
        KKFKKHFRKRNF KKVNNQEGKGEKSN+DTII YECKKPGHV WD PQRK ISKK++K +
Subjt:  KKFKKHFRKRNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKKTI

TrEMBL top hitse value%identityAlignment
A0A2N9GU68 CCHC-type domain-containing protein6.9e-6555.09Show/hide
Query:  VGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIV
        V  + I K E E+N+ D +   +N KAM+ ++CAL P+EFNRVS C+SAKEIW+ LE T+EGTNQVKESK+SMLVH YELF M  +E ISEM T F NIV
Subjt:  VGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIV

Query:  NALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANV-EEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT
        N LK LGK YT  ENVRK LRSLPK WEAK TTI EA+DL  L L+EL GSLM +E+ M + V EE+ K KK+ ALKS+    D+  E    +EE A +T
Subjt:  NALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANV-EEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT

Query:  KKFKKHFRK-----RNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKKTI
        +KFKK  +K     R FPKK    E +GE S  ++ I Y+CKKPGH K +CPQ +   K  KK +
Subjt:  KKFKKHFRK-----RNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKKTI

A0A2N9I7S8 CCHC-type domain-containing protein9.0e-6556.2Show/hide
Query:  ISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIVNALKG
        I K E E+N+ D +   +N KAM+ ++CAL P+E+NRV  C+SAKEIWD LE T+EGTNQVKESK+SMLVH YELF M  +E ISEM T F NIVN LK 
Subjt:  ISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIVNALKG

Query:  LGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANV-EEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLTKKFKK
        LGK YT  ENVRKILRSLPK WEAK T I EA+DL  L L+EL GSLMT+E+ M   V EE+ K KK+ ALKS+    D+  E    +EE A +T+KFKK
Subjt:  LGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANV-EEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLTKKFKK

Query:  HFRK-----RNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKK
          +K     R FPKK    E +GE S  ++ I Y+CKKPGH K +CPQ   + K+N K
Subjt:  HFRK-----RNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKK

A0A2N9IFK4 CCHC-type domain-containing protein1.4e-6556.98Show/hide
Query:  ISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIVNALKG
        I K E E+N+ D +   +N KAM+ ++CAL P+E+NRVS C+SAKEIWD LE T+EGTNQVKESK+SMLVH YELF M  +E ISEM T F NIVN LK 
Subjt:  ISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIVNALKG

Query:  LGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEED-AKKKKSLALKSTQIQEDSETEAELNDEEFACLTKKFKK
        LGK YT  ENVRKILRSLPK WEAK T I EA+DL  L L+EL GSLMT+E+ M   VEE+  K KK+ ALKS+    D+  E    +EE A +T+KFKK
Subjt:  LGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEED-AKKKKSLALKSTQIQEDSETEAELNDEEFACLTKKFKK

Query:  HFRK-----RNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKK
          +K     R FPKK    E KGE S  ++ I Y+CKKPGH K +CPQ   + K+N K
Subjt:  HFRK-----RNFPKKVNNQEGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKK

A0A6J1F0H1 uncharacterized protein LOC1114380994.6e-7765.7Show/hide
Query:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI
        IV N ++ K E EF++ D +K S+NA A+NC++CAL  DEFNRV  C+SA EIW  LE THEGTNQVKE+KISMLVHNYELFKM+ NE I +MFT F NI
Subjt:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI

Query:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT
        +NALK LGK Y+TSENVRKILRSLPKSWEAKVT IQEAKDL+KLPL+ELVGSLMTHEI M  ++EE++KKKKS+ALKS  I+ DSE E  L++++ A  T
Subjt:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT

Query:  KKFKKHF-RKRNFPKKVNNQ-EGKGEKSNKDTIIYYECKKPG
        +K+K    RK+ F K   NQ E KGEKS  D +I YECKKPG
Subjt:  KKFKKHF-RKRNFPKKVNNQ-EGKGEKSNKDTIIYYECKKPG

A0A6J1I2X4 uncharacterized protein LOC1114704652.5e-6767.49Show/hide
Query:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI
        IV N ++ K E EF++ D +K S+NA A+NC++CAL  DEFNRV  C+SA EIW  LE THEGTNQVKE+KISMLVHNYELFKM+ NE I +MFT F NI
Subjt:  IVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANI

Query:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT
        +NALK LGK Y+TSENVRKILRSLPKSWEAKVT IQEAKDL+KLPL+ELVGSLMTHEI M  ++EE++KKKKS+ALKS  I+ DSE E  L++++ A  T
Subjt:  VNALKGLGKSYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLT

Query:  KKF
        +K+
Subjt:  KKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTTGGTAATAAAGATATTTCTAAGGAAGAAAAAGAGTTTAATGATGAAGACAAAAGGAAGTTTTCAATTAATGCTAAAGCCATGAATTGTATGTTTTGTGCTTT
ATGTCCTGATGAGTTTAATCGAGTCTCTGCATGTAACTCAGCTAAAGAAATTTGGGATATGCTTGAAGCAACTCATGAAGGAACTAATCAAGTTAAAGAGTCAAAGATTA
GCATGTTAGTTCATAATTATGAATTGTTTAAAATGGATGCAAATGAAACTATATCTGAAATGTTTACTTGGTTCGCTAATATTGTTAATGCCTTGAAGGGATTAGGAAAA
TCTTATACCACATCTGAAAATGTGAGAAAAATTCTTAGATCATTGCCTAAGAGTTGGGAAGCTAAGGTGACGACGATCCAAGAAGCAAAAGATCTCTCAAAACTTCCACT
GGAGGAGCTCGTTGGATCTCTCATGACACATGAGATAATCATGAAGGCAAATGTGGAAGAGGATGCCAAAAAGAAGAAGAGCCTAGCATTGAAGTCCACTCAAATTCAAG
AAGACTCTGAAACTGAAGCTGAACTAAATGATGAAGAGTTCGCCTGCTTGACCAAAAAGTTCAAAAAGCACTTTAGGAAAAGGAACTTCCCAAAGAAAGTCAACAATCAA
GAAGGCAAAGGAGAAAAGAGCAACAAAGATACAATCATCTACTATGAATGCAAAAAGCCTGGACACGTGAAGTGGGATTGTCCTCAAAGAAAATTCATTTCAAAGAAGAA
CAAGAAGACCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAGTTGGTAATAAAGATATTTCTAAGGAAGAAAAAGAGTTTAATGATGAAGACAAAAGGAAGTTTTCAATTAATGCTAAAGCCATGAATTGTATGTTTTGTGCTTT
ATGTCCTGATGAGTTTAATCGAGTCTCTGCATGTAACTCAGCTAAAGAAATTTGGGATATGCTTGAAGCAACTCATGAAGGAACTAATCAAGTTAAAGAGTCAAAGATTA
GCATGTTAGTTCATAATTATGAATTGTTTAAAATGGATGCAAATGAAACTATATCTGAAATGTTTACTTGGTTCGCTAATATTGTTAATGCCTTGAAGGGATTAGGAAAA
TCTTATACCACATCTGAAAATGTGAGAAAAATTCTTAGATCATTGCCTAAGAGTTGGGAAGCTAAGGTGACGACGATCCAAGAAGCAAAAGATCTCTCAAAACTTCCACT
GGAGGAGCTCGTTGGATCTCTCATGACACATGAGATAATCATGAAGGCAAATGTGGAAGAGGATGCCAAAAAGAAGAAGAGCCTAGCATTGAAGTCCACTCAAATTCAAG
AAGACTCTGAAACTGAAGCTGAACTAAATGATGAAGAGTTCGCCTGCTTGACCAAAAAGTTCAAAAAGCACTTTAGGAAAAGGAACTTCCCAAAGAAAGTCAACAATCAA
GAAGGCAAAGGAGAAAAGAGCAACAAAGATACAATCATCTACTATGAATGCAAAAAGCCTGGACACGTGAAGTGGGATTGTCCTCAAAGAAAATTCATTTCAAAGAAGAA
CAAGAAGACCATATAA
Protein sequenceShow/hide protein sequence
MIVGNKDISKEEKEFNDEDKRKFSINAKAMNCMFCALCPDEFNRVSACNSAKEIWDMLEATHEGTNQVKESKISMLVHNYELFKMDANETISEMFTWFANIVNALKGLGK
SYTTSENVRKILRSLPKSWEAKVTTIQEAKDLSKLPLEELVGSLMTHEIIMKANVEEDAKKKKSLALKSTQIQEDSETEAELNDEEFACLTKKFKKHFRKRNFPKKVNNQ
EGKGEKSNKDTIIYYECKKPGHVKWDCPQRKFISKKNKKTI