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Lag0026237 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026237
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:33008138..33009353
RNA-Seq ExpressionLag0026237
SyntenyLag0026237
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU50210.1 hypothetical protein TSUD_408930 [Trifolium subterraneum]1.3e-0448.44Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSEQEHTK
        +F  L + FI QY YNLD+ P R  L  +SQK  ESF  YV RWR +A +    LE  E+E TK
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSEQEHTK

KYP33762.1 hypothetical protein KK1_045359, partial [Cajanus cajan]7.4e-0544.07Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE
        +++QL+  F+ +Y YN+D+ P RSDL++LS++GDESF  Y  RWR +A +    L   E
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE

KYP34223.1 hypothetical protein KK1_044857 [Cajanus cajan]3.0e-0649.15Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE
        +++QL+ +FI +Y YN+D+ P RSDL++LS+KGDESF  Y  RWR +A K    L   E
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE

KYP61766.1 hypothetical protein KK1_016276 [Cajanus cajan]7.4e-0552.08Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVA
        +++QL   F+ +Y YN+D+ P RSDL++LS+KGDESF  Y  RWR +A
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVA

KYP76623.1 hypothetical protein KK1_020874 [Cajanus cajan]1.3e-0453.33Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWR
        +++QL+  F+ +Y YN+D+ P RSDL++LS+KGDESF  Y  RWR
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWR

TrEMBL top hitse value%identityAlignment
A0A151QU09 Retrotrans_gag domain-containing protein (Fragment)3.6e-0544.07Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE
        +++QL+  F+ +Y YN+D+ P RSDL++LS++GDESF  Y  RWR +A +    L   E
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE

A0A151QVE7 Retrotrans_gag domain-containing protein1.5e-0649.15Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE
        +++QL+ +FI +Y YN+D+ P RSDL++LS+KGDESF  Y  RWR +A K    L   E
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSE

A0A151T3Y8 Retrotrans_gag domain-containing protein3.6e-0552.08Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVA
        +++QL   F+ +Y YN+D+ P RSDL++LS+KGDESF  Y  RWR +A
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVA

A0A151UBD4 Retrotrans_gag domain-containing protein6.1e-0553.33Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWR
        +++QL+  F+ +Y YN+D+ P RSDL++LS+KGDESF  Y  RWR
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWR

A0A2Z6PGS3 Ribonuclease H6.1e-0548.44Show/hide
Query:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSEQEHTK
        +F  L + FI QY YNLD+ P R  L  +SQK  ESF  YV RWR +A +    LE  E+E TK
Subjt:  SFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVARKSYKDLERSEQEHTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGACGAAGCTTTGCGACTATGCCATTCTTGGCGACGGTGATCGCCGACGAGAAGATTGTTCGGGAGACATGGTCCAAGCCCAGTGAAGACTTAGGGATTCAATT
ACGAGTTAGATCATATGGACAAGACGAGAATGACACTACTAACAAAGAAGTAGAGGGCTTTCCTGCTGAATTGTCGTTTGAGCAATTATCTCAAATGTTCATCGATCAGT
ACTCCTACAACTTAGATGTCAAACCAAAAAGATCTGATCTCGAGGCTCTAAGTCAGAAAGGTGATGAAAGTTTCAGTGCCTACGTAGGCAGGTGGAGGGCTGTCGCTAGG
AAATCATATAAAGATTTGGAACGATCCGAGCAAGAACACACGAAATCGCTTGAACACGTAGGACAAGAAACCCATGCTGTCGGAATTCGAAGGAGAAGACCCACGGTGGA
AAAATCTTGCAATCGCGTTAGATCGTCGCCGGAGTTCGAAGGAAGAAGAAGACTGCCGCTACCGAGCCCATTCGTGCGAACACACCACCGAAAGCTTGCTACATGCCGAA
GATGGTCGCCAGAGAAGGAGAAGCGTGCTGACCGACAATCGTTTCAGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACGACGAAGCTTTGCGACTATGCCATTCTTGGCGACGGTGATCGCCGACGAGAAGATTGTTCGGGAGACATGGTCCAAGCCCAGTGAAGACTTAGGGATTCAATT
ACGAGTTAGATCATATGGACAAGACGAGAATGACACTACTAACAAAGAAGTAGAGGGCTTTCCTGCTGAATTGTCGTTTGAGCAATTATCTCAAATGTTCATCGATCAGT
ACTCCTACAACTTAGATGTCAAACCAAAAAGATCTGATCTCGAGGCTCTAAGTCAGAAAGGTGATGAAAGTTTCAGTGCCTACGTAGGCAGGTGGAGGGCTGTCGCTAGG
AAATCATATAAAGATTTGGAACGATCCGAGCAAGAACACACGAAATCGCTTGAACACGTAGGACAAGAAACCCATGCTGTCGGAATTCGAAGGAGAAGACCCACGGTGGA
AAAATCTTGCAATCGCGTTAGATCGTCGCCGGAGTTCGAAGGAAGAAGAAGACTGCCGCTACCGAGCCCATTCGTGCGAACACACCACCGAAAGCTTGCTACATGCCGAA
GATGGTCGCCAGAGAAGGAGAAGCGTGCTGACCGACAATCGTTTCAGATCTAA
Protein sequenceShow/hide protein sequence
MTRRSFATMPFLATVIADEKIVRETWSKPSEDLGIQLRVRSYGQDENDTTNKEVEGFPAELSFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVAR
KSYKDLERSEQEHTKSLEHVGQETHAVGIRRRRPTVEKSCNRVRSSPEFEGRRRLPLPSPFVRTHHRKLATCRRWSPEKEKRADRQSFQI