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Lag0026246 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026246
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:33192420..33193383
RNA-Seq ExpressionLag0026246
SyntenyLag0026246
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]6.3e-3230.74Show/hide
Query:  EDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW
        EDE   V E+ ++ I   D+D+ +  V K+ T K VN E F+ LI +IW   G+V+++  G+NT++  F N++ + +V + GPW + K++I+ ++PKG  
Subjt:  EDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW

Query:  EISALEFRKYGMALG----NSICIFEK-----------MEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL
        +I+ L+F +    +       +C+ ++           + +IP E R  WG+ +RVKV++DI KPL+R   +K+G   E   + +  E+LPDFC+ CGR+
Subjt:  EISALEFRKYGMALG----NSICIFEK-----------MEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL

Query:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETKGKKSVTKNSPVREGKKIKTQKARSRRSQSCLQKWSEQPPERNTD
        GH + EC +ED++    + ++T++G W+R   I +++TK   S+T  S    G+ ++  +         ++  +  P +  +D
Subjt:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETKGKKSVTKNSPVREGKKIKTQKARSRRSQSCLQKWSEQPPERNTD

TXG53376.1 hypothetical protein EZV62_022545 [Acer yangbiense]6.1e-2732.64Show/hide
Query:  DEKGGVVEV-EDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW
        +E G V+E+ E+  ID   KD+ +  V K+ + K VN E F+ LI +IW   G+V+++  G N ++  F N + + RV+  GPW +  ++I+ ++  G  
Subjt:  DEKGGVVEV-EDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW

Query:  EISALEFRKYGMALG----NSICI-----------FEKMEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL
         +S L F +    +       +C+             ++ +IP E R  WG+ + VKVR+DI KPL+R   LK+G   E   + +  EKLPDFCY CGR+
Subjt:  EISALEFRKYGMALG----NSICI-----------FEKMEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL

Query:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETK
        G+ M EC +E++     E   T++G WL+  ++ +++ +
Subjt:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETK

TXG57113.1 hypothetical protein EZV62_018426 [Acer yangbiense]3.0e-2632.31Show/hide
Query:  EDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW
        E+++  +   E+  +D  + D+ +  V K+ + K VN E F+ LI +IW   G+V+++  G N ++  F N + + RV + GPW +  ++I+ ++P G  
Subjt:  EDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW

Query:  EISALEFRKYGMALG----NSICI-----------FEKMEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL
         IS L F K    +       +C+             ++ +IP E R  WG+ +RVKVR+DI KPL+R   LK+G   E   + +  E+LP+FCY CG++
Subjt:  EISALEFRKYGMALG----NSICI-----------FEKMEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL

Query:  GHVMNECEEEDSEDD--EEEETQYGPWLR
        GH + EC +E++     E   T++G WL+
Subjt:  GHVMNECEEEDSEDD--EEEETQYGPWLR

TXG73339.1 hypothetical protein EZV62_001918 [Acer yangbiense]1.6e-2732.95Show/hide
Query:  DEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNWE
        +E G V+E  + +I+   KD+    V K+ T K VN E F+ LI +IW   G+V+++    N ++  F  ++ + RV   GPW + K++I+ ++PKG   
Subjt:  DEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNWE

Query:  ISALEFRK--YGMALGNS--ICIFEKME-----------DIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRLG
         S L F K  + + + ++  IC+  +M            +IP + +  WG+ +RVKV +DI KPLRR   LK+G   E   + +  E+LP+FCY CGR+G
Subjt:  ISALEFRK--YGMALGNS--ICIFEKME-----------DIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRLG

Query:  HVMNECEEEDSEDDEEE--ETQYGPWLR----ENSIFRTETKGKKSVTKNSPVREGKK
        H + EC + D+     E   T+YG WL+    E    R  ++G  S +      EG +
Subjt:  HVMNECEEEDSEDDEEE--ETQYGPWLR----ENSIFRTETKGKKSVTKNSPVREGKK

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.0e-2631.45Show/hide
Query:  KQTEDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPK
        K T DE   V       I + D ++K   V K+HTSK ++AE  + ++  +W      + +  G N YV  FK+   K RV+  GPWT++K++++   P 
Subjt:  KQTEDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPK

Query:  GN-------------W-EISALEFRKYGMALGNSICIFEKMEDIPE-----EDRVWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFC
                       W +I  + F      + N   +  K+ D+ E      D   G  +RV+V++D+ KPLRRG  LK  S  ++ W P+  EKLPDFC
Subjt:  GN-------------W-EISALEFRKYGMALGNSICIFEKMEDIPE-----EDRVWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFC

Query:  YQCGRLGHVMNECEEEDSEDDEEEETQYGPWLRENSIFRTETKGKKSV
        Y+CG++GH   ECE+           QYG WLR   + ++ +  ++ V
Subjt:  YQCGRLGHVMNECEEEDSEDDEEEETQYGPWLRENSIFRTETKGKKSV

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein3.1e-3230.74Show/hide
Query:  EDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW
        EDE   V E+ ++ I   D+D+ +  V K+ T K VN E F+ LI +IW   G+V+++  G+NT++  F N++ + +V + GPW + K++I+ ++PKG  
Subjt:  EDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW

Query:  EISALEFRKYGMALG----NSICIFEK-----------MEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL
        +I+ L+F +    +       +C+ ++           + +IP E R  WG+ +RVKV++DI KPL+R   +K+G   E   + +  E+LPDFC+ CGR+
Subjt:  EISALEFRKYGMALG----NSICIFEK-----------MEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL

Query:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETKGKKSVTKNSPVREGKKIKTQKARSRRSQSCLQKWSEQPPERNTD
        GH + EC +ED++    + ++T++G W+R   I +++TK   S+T  S    G+ ++  +         ++  +  P +  +D
Subjt:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETKGKKSVTKNSPVREGKKIKTQKARSRRSQSCLQKWSEQPPERNTD

A0A5C7HB59 Uncharacterized protein3.0e-2732.64Show/hide
Query:  DEKGGVVEV-EDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW
        +E G V+E+ E+  ID   KD+ +  V K+ + K VN E F+ LI +IW   G+V+++  G N ++  F N + + RV+  GPW +  ++I+ ++  G  
Subjt:  DEKGGVVEV-EDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNW

Query:  EISALEFRKYGMALG----NSICI-----------FEKMEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL
         +S L F +    +       +C+             ++ +IP E R  WG+ + VKVR+DI KPL+R   LK+G   E   + +  EKLPDFCY CGR+
Subjt:  EISALEFRKYGMALG----NSICI-----------FEKMEDIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRL

Query:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETK
        G+ M EC +E++     E   T++G WL+  ++ +++ +
Subjt:  GHVMNECEEEDSEDD--EEEETQYGPWLRENSIFRTETK

A0A5C7IW83 CCHC-type domain-containing protein7.8e-2832.95Show/hide
Query:  DEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNWE
        +E G V+E  + +I+   KD+    V K+ T K VN E F+ LI +IW   G+V+++    N ++  F  ++ + RV   GPW + K++I+ ++PKG   
Subjt:  DEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNWE

Query:  ISALEFRK--YGMALGNS--ICIFEKME-----------DIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRLG
         S L F K  + + + ++  IC+  +M            +IP + +  WG+ +RVKV +DI KPLRR   LK+G   E   + +  E+LP+FCY CGR+G
Subjt:  ISALEFRK--YGMALGNS--ICIFEKME-----------DIPEEDR-VWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRLG

Query:  HVMNECEEEDSEDDEEE--ETQYGPWLR----ENSIFRTETKGKKSVTKNSPVREGKK
        H + EC + D+     E   T+YG WL+    E    R  ++G  S +      EG +
Subjt:  HVMNECEEEDSEDDEEE--ETQYGPWLR----ENSIFRTETKGKKSVTKNSPVREGKK

A0A6J1D765 uncharacterized protein LOC1110179021.9e-2631.45Show/hide
Query:  KQTEDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPK
        K T DE   V       I + D ++K   V K+HTSK ++AE  + ++  +W      + +  G N YV  FK+   K RV+  GPWT++K++++   P 
Subjt:  KQTEDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPK

Query:  GN-------------W-EISALEFRKYGMALGNSICIFEKMEDIPE-----EDRVWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFC
                       W +I  + F      + N   +  K+ D+ E      D   G  +RV+V++D+ KPLRRG  LK  S  ++ W P+  EKLPDFC
Subjt:  GN-------------W-EISALEFRKYGMALGNSICIFEKMEDIPE-----EDRVWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFC

Query:  YQCGRLGHVMNECEEEDSEDDEEEETQYGPWLRENSIFRTETKGKKSV
        Y+CG++GH   ECE+           QYG WLR   + ++ +  ++ V
Subjt:  YQCGRLGHVMNECEEEDSEDDEEEETQYGPWLRENSIFRTETKGKKSV

A0A6J1DU55 uncharacterized protein LOC1110231354.3e-2630.85Show/hide
Query:  KQTEDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPK
        K T +E    ++V+ + +   ++ L    V K+   + ++A+   R++   W  E ++ ++  GKN ++  F       RV+  GPW +DKA+I+  +P 
Subjt:  KQTEDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPK

Query:  GNWEISALEFRK------------------YGMALGNSICIFEKMEDIPEEDRVWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCY
         +  IS LEF +                    + LGN+I  F  + D  E+   WG SLR++V +DI KPLRRG  + +       WIPI  E+LPDFCY
Subjt:  GNWEISALEFRK------------------YGMALGNSICIFEKMEDIPEEDRVWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCY

Query:  QCGRLGHVMNECEEE--DSEDDEEEETQYGPWLRENSIFRTETKGKKSVTKNSPVREGK-KIKTQKARSRRSQSCLQKWSEQ
         CG +GH  ++C+     ++DD    ++YGPWLR         KG+K     SP RE      +  ++ R  +   Q+ SEQ
Subjt:  QCGRLGHVMNECEEE--DSEDDEEEETQYGPWLRENSIFRTETKGKKSVTKNSPVREGK-KIKTQKARSRRSQSCLQKWSEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAACAGAAGATGAGAAAGGAGGGGTTGTTGAAGTCGAAGACAATGACATTGACAGCACCGACAAAGACTTAAAGAAAGTAGCAGTGTGCAAGATTCATACGTC
TAAAGGAGTCAATGCAGAACATTTCCAGCGGCTAATTCCAAAGATCTGGGGAGCTGAGGGGAAAGTTCAAATGAAGAAAACCGGAAAAAACACTTATGTATGCAAGTTCA
AGAATAGGAAAACGAAAAGGAGAGTCATCGATGGGGGACCATGGACATACGACAAAGCTGTCATTCTCTTTGATGAGCCAAAAGGGAATTGGGAAATCAGTGCGTTGGAA
TTCAGGAAATACGGGATGGCTTTGGGCAACTCGATCTGCATTTTTGAGAAGATGGAGGATATACCTGAGGAAGATAGAGTCTGGGGTGAATCTCTAAGAGTCAAAGTAAG
AATGGATATCAAGAAGCCTTTAAGAAGAGGAACAAATTTAAAAGTGGGTTCAATGGCAGAAGAAAAATGGATCCCGATAACAATAGAAAAGCTACCAGATTTTTGTTACC
AATGTGGAAGATTAGGTCACGTGATGAACGAGTGTGAGGAGGAAGATAGTGAGGATGATGAAGAAGAAGAAACACAGTATGGACCATGGCTAAGGGAAAACTCGATCTTC
AGAACAGAAACAAAAGGAAAAAAATCGGTAACAAAAAACAGCCCAGTTAGAGAGGGGAAGAAGATAAAAACACAGAAAGCAAGGTCGAGGAGATCTCAAAGTTGCTTGCA
GAAGTGGTCAGAACAGCCACCGGAGAGGAACACCGATCGGAGAACCACCAGTCACTACCAGACAAACAAAACCATAAGGACAAAGAGGACAGAGACAGATCAAATCAGAA
TGTGCAAGTGTCAGAAACAGCAGACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAACAGAAGATGAGAAAGGAGGGGTTGTTGAAGTCGAAGACAATGACATTGACAGCACCGACAAAGACTTAAAGAAAGTAGCAGTGTGCAAGATTCATACGTC
TAAAGGAGTCAATGCAGAACATTTCCAGCGGCTAATTCCAAAGATCTGGGGAGCTGAGGGGAAAGTTCAAATGAAGAAAACCGGAAAAAACACTTATGTATGCAAGTTCA
AGAATAGGAAAACGAAAAGGAGAGTCATCGATGGGGGACCATGGACATACGACAAAGCTGTCATTCTCTTTGATGAGCCAAAAGGGAATTGGGAAATCAGTGCGTTGGAA
TTCAGGAAATACGGGATGGCTTTGGGCAACTCGATCTGCATTTTTGAGAAGATGGAGGATATACCTGAGGAAGATAGAGTCTGGGGTGAATCTCTAAGAGTCAAAGTAAG
AATGGATATCAAGAAGCCTTTAAGAAGAGGAACAAATTTAAAAGTGGGTTCAATGGCAGAAGAAAAATGGATCCCGATAACAATAGAAAAGCTACCAGATTTTTGTTACC
AATGTGGAAGATTAGGTCACGTGATGAACGAGTGTGAGGAGGAAGATAGTGAGGATGATGAAGAAGAAGAAACACAGTATGGACCATGGCTAAGGGAAAACTCGATCTTC
AGAACAGAAACAAAAGGAAAAAAATCGGTAACAAAAAACAGCCCAGTTAGAGAGGGGAAGAAGATAAAAACACAGAAAGCAAGGTCGAGGAGATCTCAAAGTTGCTTGCA
GAAGTGGTCAGAACAGCCACCGGAGAGGAACACCGATCGGAGAACCACCAGTCACTACCAGACAAACAAAACCATAAGGACAAAGAGGACAGAGACAGATCAAATCAGAA
TGTGCAAGTGTCAGAAACAGCAGACAAAGTAG
Protein sequenceShow/hide protein sequence
MKQTEDEKGGVVEVEDNDIDSTDKDLKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGKNTYVCKFKNRKTKRRVIDGGPWTYDKAVILFDEPKGNWEISALE
FRKYGMALGNSICIFEKMEDIPEEDRVWGESLRVKVRMDIKKPLRRGTNLKVGSMAEEKWIPITIEKLPDFCYQCGRLGHVMNECEEEDSEDDEEEETQYGPWLRENSIF
RTETKGKKSVTKNSPVREGKKIKTQKARSRRSQSCLQKWSEQPPERNTDRRTTSHYQTNKTIRTKRTETDQIRMCKCQKQQTK